RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
GYPC-203ENST00000409836 KIAA0586Q9BVV6 1533 aa23.69■■□□□ 1.38
GYPC-203ENST00000409836 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
GYPC-203ENST00000409836 IQGAP2Q13576 1575 aa23.61■■□□□ 1.37
GYPC-203ENST00000409836 CTTNBP2Q8WZ74 1663 aa23.6■■□□□ 1.37
GYPC-203ENST00000409836 ERCC6L2Q5T890 1561 aa23.59■■□□□ 1.37
GYPC-203ENST00000409836 KIF21BO75037 1637 aa23.55■■□□□ 1.36
GYPC-203ENST00000409836 UGGT2Q9NYU1 1516 aa23.51■■□□□ 1.35
GYPC-203ENST00000409836 PRG4Q92954 1404 aaPredicted RBP23.5■■□□□ 1.35
GYPC-203ENST00000409836 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
GYPC-203ENST00000409836 JPH4Q96JJ6 628 aa23.48■■□□□ 1.35
GYPC-203ENST00000409836 DISP1Q96F81 1524 aa23.42■■□□□ 1.34
GYPC-203ENST00000409836 KIAA0556O60303 1618 aa23.4■■□□□ 1.34
GYPC-203ENST00000409836 CARMIL2Q6F5E8 1435 aa23.36■■□□□ 1.33
GYPC-203ENST00000409836 CYB5RLQ6IPT4 315 aa23.35■■□□□ 1.33
GYPC-203ENST00000409836 SAMD9Q5K651 1589 aa23.31■■□□□ 1.32
GYPC-203ENST00000409836 GOLGA3Q08378 1498 aa23.31■■□□□ 1.32
GYPC-203ENST00000409836 TNIKQ9UKE5 1360 aa23.29■■□□□ 1.32
GYPC-203ENST00000409836 ADCY10Q96PN6 1610 aa23.27■■□□□ 1.32
GYPC-203ENST00000409836 FAM9AQ8IZU1 332 aaPredicted RBP23.22■■□□□ 1.31
GYPC-203ENST00000409836 UHRF1BP1LA0JNW5 1464 aa23.22■■□□□ 1.31
GYPC-203ENST00000409836 EFCAB5A4FU69 1503 aa23.22■■□□□ 1.31
GYPC-203ENST00000409836 PTPRGP23470 1445 aa23.21■■□□□ 1.31
GYPC-203ENST00000409836 ABCC2Q92887 1545 aa23.18■■□□□ 1.3
GYPC-203ENST00000409836 MAPKBP1O60336 1514 aa23.17■■□□□ 1.3
GYPC-203ENST00000409836 ABCA8O94911 1581 aa23.14■■□□□ 1.29
GYPC-203ENST00000409836 UACAQ9BZF9 1416 aa23.12■■□□□ 1.29
GYPC-203ENST00000409836 KDM5BQ9UGL1 1544 aa23.08■■□□□ 1.29
GYPC-203ENST00000409836 PLB1Q6P1J6 1458 aa23.05■■□□□ 1.28
GYPC-203ENST00000409836 ZCCHC11Q5TAX3 1644 aaKnown RBP23.02■■□□□ 1.28
GYPC-203ENST00000409836 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
GYPC-203ENST00000409836 ARHGAP35Q9NRY4 1499 aa23.01■■□□□ 1.27
GYPC-203ENST00000409836 RAPGEF6Q8TEU7 1601 aa23■■□□□ 1.27
GYPC-203ENST00000409836 DIP2BQ9P265 1576 aa22.98■■□□□ 1.27
GYPC-203ENST00000409836 FHOD3Q2V2M9 1422 aa22.98■■□□□ 1.27
GYPC-203ENST00000409836 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
GYPC-203ENST00000409836 ABCC10Q5T3U5 1492 aa22.96■■□□□ 1.27
GYPC-203ENST00000409836 NUP153P49790 1475 aaKnown RBP22.91■■□□□ 1.26
GYPC-203ENST00000409836 ASXL2Q76L83 1435 aa22.9■■□□□ 1.26
GYPC-203ENST00000409836 GLI2P10070 1586 aa22.89■■□□□ 1.26
GYPC-203ENST00000409836 NPM1P06748 294 aaKnown RBP eCLIP22.89■■□□□ 1.25
GYPC-203ENST00000409836 FMN1Q68DA7 1419 aa22.89■■□□□ 1.25
GYPC-203ENST00000409836 WDR7Q9Y4E6 1490 aa22.85■■□□□ 1.25
GYPC-203ENST00000409836 TTBK1Q5TCY1 1321 aaPredicted RBP22.84■■□□□ 1.25
GYPC-203ENST00000409836 HECW1Q76N89 1606 aa22.84■■□□□ 1.25
GYPC-203ENST00000409836 P3H3Q8IVL6 736 aa22.84■■□□□ 1.25
GYPC-203ENST00000409836 ATP10BO94823 1461 aa22.84■■□□□ 1.25
GYPC-203ENST00000409836 CLIP1P30622 1438 aa22.82■■□□□ 1.24
GYPC-203ENST00000409836 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
GYPC-203ENST00000409836 MAP3K4Q9Y6R4 1608 aa22.79■■□□□ 1.24
GYPC-203ENST00000409836 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
GYPC-203ENST00000409836 PCF11O94913 1555 aaKnown RBP22.78■■□□□ 1.24
GYPC-203ENST00000409836 CEP162Q5TB80 1403 aa22.77■■□□□ 1.24
GYPC-203ENST00000409836 TRHP20396 242 aaPredicted RBP22.77■■□□□ 1.24
GYPC-203ENST00000409836 LRRIQ1Q96JM4 1722 aa22.76■■□□□ 1.23
GYPC-203ENST00000409836 PPRC1Q5VV67 1664 aaKnown RBP22.75■■□□□ 1.23
GYPC-203ENST00000409836 CFAP43Q8NDM7 1665 aa22.74■■□□□ 1.23
GYPC-203ENST00000409836 FYCO1Q9BQS8 1478 aa22.74■■□□□ 1.23
GYPC-203ENST00000409836 RANGAP1P46060 587 aaPredicted RBP22.74■■□□□ 1.23
GYPC-203ENST00000409836 CASKIN1Q8WXD9 1431 aa22.74■■□□□ 1.23
GYPC-203ENST00000409836 ABCA9Q8IUA7 1624 aa22.71■■□□□ 1.23
GYPC-203ENST00000409836 CDK13Q14004 1512 aaKnown RBP22.69■■□□□ 1.22
GYPC-203ENST00000409836 FAM69CQ0P6D2 419 aa22.68■■□□□ 1.22
GYPC-203ENST00000409836 CCDC18Q5T9S5 1454 aa22.67■■□□□ 1.22
GYPC-203ENST00000409836 TSPOAP1O95153 1857 aa22.64■■□□□ 1.21
GYPC-203ENST00000409836 MAGI3Q5TCQ9 1506 aa22.63■■□□□ 1.21
GYPC-203ENST00000409836 TEX14Q8IWB6 1497 aa22.6■■□□□ 1.21
GYPC-203ENST00000409836 LOC105371045A0A1W2PR82 267 aa22.58■■□□□ 1.21
GYPC-203ENST00000409836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.55■■□□□ 1.24e-6■■■□□ 16.3
GYPC-203ENST00000409836 TTC37Q6PGP7 1564 aa22.55■■□□□ 1.2
GYPC-203ENST00000409836 TROQ12816 1431 aaPredicted RBP22.54■■□□□ 1.2
GYPC-203ENST00000409836 CD109Q6YHK3 1445 aa22.54■■□□□ 1.2
GYPC-203ENST00000409836 KIF14Q15058 1648 aa22.53■■□□□ 1.2
GYPC-203ENST00000409836 ARID3CA6NKF2 412 aa22.53■■□□□ 1.2
GYPC-203ENST00000409836 VPS8Q8N3P4 1428 aa22.53■■□□□ 1.2
GYPC-203ENST00000409836 KDM6BO15054 1643 aa22.52■■□□□ 1.2
GYPC-203ENST00000409836 ARAP3Q8WWN8 1544 aa22.52■■□□□ 1.19
GYPC-203ENST00000409836 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
GYPC-203ENST00000409836 CFAP74Q9C0B2 1584 aa22.48■■□□□ 1.19
GYPC-203ENST00000409836 MYO5CQ9NQX4 1742 aa22.47■■□□□ 1.19
GYPC-203ENST00000409836 CDK11AQ9UQ88 783 aaPredicted RBP22.46■■□□□ 1.19
GYPC-203ENST00000409836 NEO1Q92859 1461 aa22.46■■□□□ 1.19
GYPC-203ENST00000409836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.44■■□□□ 1.18
GYPC-203ENST00000409836 MAP3K1Q13233 1512 aa22.44■■□□□ 1.18
GYPC-203ENST00000409836 HNRNPUL2Q1KMD3 747 aaKnown RBP22.44■■□□□ 1.18
GYPC-203ENST00000409836 PHLDB1Q86UU1 1377 aa22.44■■□□□ 1.18
GYPC-203ENST00000409836 KCNH8Q96L42 1107 aa22.43■■□□□ 1.18
GYPC-203ENST00000409836 TIAM1Q13009 1591 aa22.42■■□□□ 1.18
GYPC-203ENST00000409836 EHBP1L1Q8N3D4 1523 aa22.42■■□□□ 1.18
GYPC-203ENST00000409836 PREX2Q70Z35 1606 aa22.41■■□□□ 1.18
GYPC-203ENST00000409836 COL17A1Q9UMD9 1497 aaPredicted RBP22.4■■□□□ 1.18
GYPC-203ENST00000409836 PLCH2O75038 1416 aa22.38■■□□□ 1.17
GYPC-203ENST00000409836 ATP1B4Q9UN42 357 aaPredicted RBP22.37■■□□□ 1.17
GYPC-203ENST00000409836 CDC42BPAQ5VT25 1732 aa22.37■■□□□ 1.17
GYPC-203ENST00000409836 FANCAO15360 1455 aa22.36■■□□□ 1.17
GYPC-203ENST00000409836 CDC42BPBQ9Y5S2 1711 aa22.36■■□□□ 1.17
GYPC-203ENST00000409836 FRMPD1Q5SYB0 1578 aa22.34■■□□□ 1.17
GYPC-203ENST00000409836 RICTORQ6R327 1708 aa22.33■■□□□ 1.17
GYPC-203ENST00000409836 SUPT6HQ7KZ85 1726 aaKnown RBP22.29■■□□□ 1.16
GYPC-203ENST00000409836 MTUS2Q5JR59 1369 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms