RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 KIAA0586Q9BVV6 1533 aa27.31■■□□□ 1.96
SUMO1-208ENST00000409627 IQGAP2Q13576 1575 aa27.26■■□□□ 1.95
SUMO1-208ENST00000409627 SHROOM2Q13796 1616 aa27.25■■□□□ 1.95
SUMO1-208ENST00000409627 EHMT2Q96KQ7 1210 aa27.13■■□□□ 1.93
SUMO1-208ENST00000409627 UGGT2Q9NYU1 1516 aa27.12■■□□□ 1.93
SUMO1-208ENST00000409627 UBTFP17480 764 aaKnown RBP27.12■■□□□ 1.93
SUMO1-208ENST00000409627 JPH4Q96JJ6 628 aa27.12■■□□□ 1.93
SUMO1-208ENST00000409627 DNAJC5Q9H3Z4 198 aa27.1■■□□□ 1.93
SUMO1-208ENST00000409627 ARHGEF11O15085 1522 aa27.07■■□□□ 1.92
SUMO1-208ENST00000409627 PRG4Q92954 1404 aaPredicted RBP27.06■■□□□ 1.92
SUMO1-208ENST00000409627 TNIKQ9UKE5 1360 aa27.05■■□□□ 1.92
SUMO1-208ENST00000409627 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
SUMO1-208ENST00000409627 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
SUMO1-208ENST00000409627 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
SUMO1-208ENST00000409627 ERCC6L2Q5T890 1561 aa27.03■■□□□ 1.92
SUMO1-208ENST00000409627 DISP1Q96F81 1524 aa27■■□□□ 1.91
SUMO1-208ENST00000409627 KIAA0556O60303 1618 aa27■■□□□ 1.91
SUMO1-208ENST00000409627 SAMD9Q5K651 1589 aa27■■□□□ 1.91
SUMO1-208ENST00000409627 CARMIL2Q6F5E8 1435 aa26.99■■□□□ 1.91
SUMO1-208ENST00000409627 LOC105371045A0A1W2PR82 267 aa26.98■■□□□ 1.91
SUMO1-208ENST00000409627 EFCAB5A4FU69 1503 aa26.95■■□□□ 1.91
SUMO1-208ENST00000409627 ARAP1Q96P48 1450 aa26.88■■□□□ 1.89
SUMO1-208ENST00000409627 RANGAP1P46060 587 aaPredicted RBP26.85■■□□□ 1.89
SUMO1-208ENST00000409627 ARHGAP35Q9NRY4 1499 aa26.85■■□□□ 1.89
SUMO1-208ENST00000409627 CLIP1P30622 1438 aa26.82■■□□□ 1.88
SUMO1-208ENST00000409627 CEP162Q5TB80 1403 aa26.82■■□□□ 1.88
SUMO1-208ENST00000409627 PTPRGP23470 1445 aa26.79■■□□□ 1.88
SUMO1-208ENST00000409627 FHOD3Q2V2M9 1422 aa26.78■■□□□ 1.88
SUMO1-208ENST00000409627 P3H3Q8IVL6 736 aa26.76■■□□□ 1.87
SUMO1-208ENST00000409627 CYB5RLQ6IPT4 315 aa26.7■■□□□ 1.86
SUMO1-208ENST00000409627 TTBK1Q5TCY1 1321 aaPredicted RBP26.67■■□□□ 1.86
SUMO1-208ENST00000409627 ABCA8O94911 1581 aa26.67■■□□□ 1.86
SUMO1-208ENST00000409627 FMN1Q68DA7 1419 aa26.65■■□□□ 1.86
SUMO1-208ENST00000409627 UACAQ9BZF9 1416 aa26.65■■□□□ 1.86
SUMO1-208ENST00000409627 ADCY10Q96PN6 1610 aa26.64■■□□□ 1.85
SUMO1-208ENST00000409627 UHRF1BP1LA0JNW5 1464 aa26.63■■□□□ 1.85
SUMO1-208ENST00000409627 RAPGEF6Q8TEU7 1601 aa26.63■■□□□ 1.85
SUMO1-208ENST00000409627 ABCC2Q92887 1545 aa26.63■■□□□ 1.85
SUMO1-208ENST00000409627 PLB1Q6P1J6 1458 aa26.62■■□□□ 1.85
SUMO1-208ENST00000409627 PCF11O94913 1555 aaKnown RBP26.53■■□□□ 1.84
SUMO1-208ENST00000409627 HECW1Q76N89 1606 aa26.52■■□□□ 1.84
SUMO1-208ENST00000409627 KDM5BQ9UGL1 1544 aa26.49■■□□□ 1.83
SUMO1-208ENST00000409627 NUP153P49790 1475 aaKnown RBP26.49■■□□□ 1.83
SUMO1-208ENST00000409627 CASKIN1Q8WXD9 1431 aa26.49■■□□□ 1.83
SUMO1-208ENST00000409627 FYCO1Q9BQS8 1478 aa26.49■■□□□ 1.83
SUMO1-208ENST00000409627 VPS8Q8N3P4 1428 aa26.48■■□□□ 1.83
SUMO1-208ENST00000409627 ZCCHC11Q5TAX3 1644 aaKnown RBP26.47■■□□□ 1.83
SUMO1-208ENST00000409627 LRRIQ1Q96JM4 1722 aa26.44■■□□□ 1.82
SUMO1-208ENST00000409627 NPM1P06748 294 aaKnown RBP eCLIP26.41■■□□□ 1.82
SUMO1-208ENST00000409627 ATP10BO94823 1461 aa26.41■■□□□ 1.82
SUMO1-208ENST00000409627 MAPKBP1O60336 1514 aa26.39■■□□□ 1.81
SUMO1-208ENST00000409627 EPRSP07814 1512 aaKnown RBP26.39■■□□□ 1.81
SUMO1-208ENST00000409627 CCDC18Q5T9S5 1454 aa26.37■■□□□ 1.81
SUMO1-208ENST00000409627 CDK13Q14004 1512 aaKnown RBP26.35■■□□□ 1.81
SUMO1-208ENST00000409627 ATP1B4Q9UN42 357 aaPredicted RBP26.34■■□□□ 1.81
SUMO1-208ENST00000409627 ARID3CA6NKF2 412 aa26.31■■□□□ 1.8
SUMO1-208ENST00000409627 ASXL2Q76L83 1435 aa26.3■■□□□ 1.8
SUMO1-208ENST00000409627 CFAP43Q8NDM7 1665 aa26.29■■□□□ 1.8
SUMO1-208ENST00000409627 WDR7Q9Y4E6 1490 aa26.25■■□□□ 1.79
SUMO1-208ENST00000409627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.25■■□□□ 1.79
SUMO1-208ENST00000409627 HNRNPUL2Q1KMD3 747 aaKnown RBP26.25■■□□□ 1.79
SUMO1-208ENST00000409627 TIAM1Q13009 1591 aa26.24■■□□□ 1.79
SUMO1-208ENST00000409627 MAP3K1Q13233 1512 aa26.24■■□□□ 1.79
SUMO1-208ENST00000409627 CDK11AQ9UQ88 783 aaPredicted RBP26.19■■□□□ 1.78
SUMO1-208ENST00000409627 DIP2BQ9P265 1576 aa26.18■■□□□ 1.78
SUMO1-208ENST00000409627 PLEKHD1A6NEE1 506 aa26.17■■□□□ 1.78
SUMO1-208ENST00000409627 MAGI3Q5TCQ9 1506 aa26.17■■□□□ 1.78
SUMO1-208ENST00000409627 ABCC10Q5T3U5 1492 aa26.17■■□□□ 1.78
SUMO1-208ENST00000409627 KIF13AQ9H1H9 1805 aa26.16■■□□□ 1.78
SUMO1-208ENST00000409627 TROQ12816 1431 aaPredicted RBP26.15■■□□□ 1.78
SUMO1-208ENST00000409627 GLI2P10070 1586 aa26.13■■□□□ 1.77
SUMO1-208ENST00000409627 EHBP1L1Q8N3D4 1523 aa26.13■■□□□ 1.77
SUMO1-208ENST00000409627 KIF14Q15058 1648 aa26.1■■□□□ 1.77
SUMO1-208ENST00000409627 APLP2Q06481 763 aa26.1■■□□□ 1.77
SUMO1-208ENST00000409627 MTUS2Q5JR59 1369 aa26.08■■□□□ 1.77
SUMO1-208ENST00000409627 LRRC9Q6ZRR7 1453 aa26.08■■□□□ 1.77
SUMO1-208ENST00000409627 ABCA9Q8IUA7 1624 aa26.07■■□□□ 1.76
SUMO1-208ENST00000409627 KCNH8Q96L42 1107 aa26.05■■□□□ 1.76
SUMO1-208ENST00000409627 MAP3K4Q9Y6R4 1608 aa26.05■■□□□ 1.76
SUMO1-208ENST00000409627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.04■■□□□ 1.76
SUMO1-208ENST00000409627 SUPT6HQ7KZ85 1726 aaKnown RBP26.02■■□□□ 1.76
SUMO1-208ENST00000409627 FAM69CQ0P6D2 419 aa26.02■■□□□ 1.76
SUMO1-208ENST00000409627 TTC37Q6PGP7 1564 aa26.02■■□□□ 1.76
SUMO1-208ENST00000409627 TRHP20396 242 aaPredicted RBP25.99■■□□□ 1.75
SUMO1-208ENST00000409627 KANK4Q5T7N3 995 aaPredicted RBP25.99■■□□□ 1.75
SUMO1-208ENST00000409627 MYO5CQ9NQX4 1742 aa25.96■■□□□ 1.75
SUMO1-208ENST00000409627 PPRC1Q5VV67 1664 aaKnown RBP25.93■■□□□ 1.74
SUMO1-208ENST00000409627 NCOA2Q15596 1464 aa25.93■■□□□ 1.74
SUMO1-208ENST00000409627 CD109Q6YHK3 1445 aa25.93■■□□□ 1.74
SUMO1-208ENST00000409627 TSPOAP1O95153 1857 aa25.93■■□□□ 1.74
SUMO1-208ENST00000409627 CDC42BPAQ5VT25 1732 aa25.91■■□□□ 1.74
SUMO1-208ENST00000409627 PREX2Q70Z35 1606 aa25.9■■□□□ 1.74
SUMO1-208ENST00000409627 ARAP3Q8WWN8 1544 aa25.89■■□□□ 1.74
SUMO1-208ENST00000409627 ITSN2Q9NZM3 1697 aa25.89■■□□□ 1.73
SUMO1-208ENST00000409627 CDC42BPBQ9Y5S2 1711 aa25.87■■□□□ 1.73
SUMO1-208ENST00000409627 PLCH2O75038 1416 aa25.86■■□□□ 1.73
SUMO1-208ENST00000409627 TEX14Q8IWB6 1497 aa25.85■■□□□ 1.73
SUMO1-208ENST00000409627 CCNB3Q8WWL7 1395 aa25.84■■□□□ 1.73
SUMO1-208ENST00000409627 GPATCH8Q9UKJ3 1502 aaKnown RBP25.84■■□□□ 1.73
SUMO1-208ENST00000409627 CFAP74Q9C0B2 1584 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms