RNA–Protein interactions for RNA: ENST00000409422.5

ATG9A-204, Transcript of autophagy related 9A, humanhuman

TSL 5 BASIC

Gene ATG9A, Length 2,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-204ENST00000409422 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
ATG9A-204ENST00000409422 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
ATG9A-204ENST00000409422 RAPGEF2Q9Y4G8 1499 aa21.68■■□□□ 1.06
ATG9A-204ENST00000409422 CHD1O14646 1710 aa21.65■■□□□ 1.06
ATG9A-204ENST00000409422 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
ATG9A-204ENST00000409422 CLIP1P30622 1438 aa21.63■■□□□ 1.05
ATG9A-204ENST00000409422 GRIN2AQ12879 1464 aa21.6■■□□□ 1.05
ATG9A-204ENST00000409422 CTTNBP2Q8WZ74 1663 aa21.56■■□□□ 1.04
ATG9A-204ENST00000409422 VPS8Q8N3P4 1428 aa21.54■■□□□ 1.04
ATG9A-204ENST00000409422 CEP170Q5SW79 1584 aa21.52■■□□□ 1.04
ATG9A-204ENST00000409422 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
ATG9A-204ENST00000409422 RANGAP1P46060 587 aaPredicted RBP21.49■■□□□ 1.03
ATG9A-204ENST00000409422 NUP160Q12769 1436 aa21.48■■□□□ 1.03
ATG9A-204ENST00000409422 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
ATG9A-204ENST00000409422 HNRNPUL2Q1KMD3 747 aaKnown RBP21.45■■□□□ 1.02
ATG9A-204ENST00000409422 FBLN2P98095 1184 aa21.43■■□□□ 1.02
ATG9A-204ENST00000409422 DIEXFQ68CQ4 756 aaKnown RBP21.43■■□□□ 1.02
ATG9A-204ENST00000409422 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
ATG9A-204ENST00000409422 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.01
ATG9A-204ENST00000409422 KIAA0586Q9BVV6 1533 aa21.37■■□□□ 1.01
ATG9A-204ENST00000409422 APLP2Q06481 763 aa21.35■■□□□ 1.01
ATG9A-204ENST00000409422 ARAP1Q96P48 1450 aa21.33■■□□□ 1
ATG9A-204ENST00000409422 SHROOM2Q13796 1616 aa21.32■■□□□ 1
ATG9A-204ENST00000409422 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
ATG9A-204ENST00000409422 SAMD9Q5K651 1589 aa21.28■■□□□ 1
ATG9A-204ENST00000409422 ZNF316A6NFI3 1004 aaPredicted RBP21.27■■□□□ 1
ATG9A-204ENST00000409422 NEUROD1Q13562 356 aa21.27■■□□□ 1
ATG9A-204ENST00000409422 ACIN1Q9UKV3 1341 aaKnown RBP21.25■□□□□ 0.99
ATG9A-204ENST00000409422 KANK4Q5T7N3 995 aaPredicted RBP21.24■□□□□ 0.99
ATG9A-204ENST00000409422 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
ATG9A-204ENST00000409422 ARHGAP35Q9NRY4 1499 aa21.23■□□□□ 0.99
ATG9A-204ENST00000409422 DISP1Q96F81 1524 aa21.21■□□□□ 0.99
ATG9A-204ENST00000409422 KIAA0556O60303 1618 aa21.21■□□□□ 0.99
ATG9A-204ENST00000409422 OSCARQ8IYS5 282 aa21.2■□□□□ 0.98
ATG9A-204ENST00000409422 ERCC6L2Q5T890 1561 aa21.16■□□□□ 0.98
ATG9A-204ENST00000409422 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
ATG9A-204ENST00000409422 PRG4Q92954 1404 aaPredicted RBP21.13■□□□□ 0.97
ATG9A-204ENST00000409422 FHOD3Q2V2M9 1422 aa21.11■□□□□ 0.97
ATG9A-204ENST00000409422 CARMIL2Q6F5E8 1435 aa21.07■□□□□ 0.96
ATG9A-204ENST00000409422 RRBP1Q9P2E9 1410 aaKnown RBP21.06■□□□□ 0.96
ATG9A-204ENST00000409422 DHX57Q6P158 1386 aaKnown RBP21.06■□□□□ 0.96
ATG9A-204ENST00000409422 CENPBP07199 599 aaPredicted RBP21.04■□□□□ 0.96
ATG9A-204ENST00000409422 P3H3Q8IVL6 736 aa21.04■□□□□ 0.96
ATG9A-204ENST00000409422 MIER1Q8N108 512 aa21.02■□□□□ 0.95
ATG9A-204ENST00000409422 GTF3C3Q9Y5Q9 886 aa21.01■□□□□ 0.95
ATG9A-204ENST00000409422 ARHGEF11O15085 1522 aa21■□□□□ 0.95
ATG9A-204ENST00000409422 PCF11O94913 1555 aaKnown RBP21■□□□□ 0.95
ATG9A-204ENST00000409422 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
ATG9A-204ENST00000409422 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
ATG9A-204ENST00000409422 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
ATG9A-204ENST00000409422 CLSPNQ9HAW4 1339 aa20.97■□□□□ 0.95
ATG9A-204ENST00000409422 FMN1Q68DA7 1419 aa20.96■□□□□ 0.95
ATG9A-204ENST00000409422 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
ATG9A-204ENST00000409422 LRRIQ1Q96JM4 1722 aa20.95■□□□□ 0.94
ATG9A-204ENST00000409422 ABCA8O94911 1581 aa20.93■□□□□ 0.94
ATG9A-204ENST00000409422 RAPGEF6Q8TEU7 1601 aa20.93■□□□□ 0.94
ATG9A-204ENST00000409422 FYCO1Q9BQS8 1478 aa20.91■□□□□ 0.94
ATG9A-204ENST00000409422 YTHDC1Q96MU7 727 aaKnown RBP20.91■□□□□ 0.94
ATG9A-204ENST00000409422 PTPRGP23470 1445 aa20.9■□□□□ 0.94
ATG9A-204ENST00000409422 PLB1Q6P1J6 1458 aa20.9■□□□□ 0.94
ATG9A-204ENST00000409422 CASKIN1Q8WXD9 1431 aa20.9■□□□□ 0.94
ATG9A-204ENST00000409422 TIAM1Q13009 1591 aa20.88■□□□□ 0.93
ATG9A-204ENST00000409422 HECW1Q76N89 1606 aa20.88■□□□□ 0.93
ATG9A-204ENST00000409422 ITGAEP38570 1179 aa20.86■□□□□ 0.93
ATG9A-204ENST00000409422 MAP3K1Q13233 1512 aa20.85■□□□□ 0.93
ATG9A-204ENST00000409422 NUP153P49790 1475 aaKnown RBP20.85■□□□□ 0.93
ATG9A-204ENST00000409422 CFAP43Q8NDM7 1665 aa20.84■□□□□ 0.93
ATG9A-204ENST00000409422 ADCY10Q96PN6 1610 aa20.84■□□□□ 0.93
ATG9A-204ENST00000409422 ABCC2Q92887 1545 aa20.83■□□□□ 0.93
ATG9A-204ENST00000409422 PELP1Q8IZL8 1130 aaKnown RBP20.82■□□□□ 0.92
ATG9A-204ENST00000409422 UACAQ9BZF9 1416 aa20.82■□□□□ 0.92
ATG9A-204ENST00000409422 LRRC9Q6ZRR7 1453 aa20.82■□□□□ 0.92
ATG9A-204ENST00000409422 UHRF1BP1LA0JNW5 1464 aa20.81■□□□□ 0.92
ATG9A-204ENST00000409422 PHLDB1Q86UU1 1377 aa20.79■□□□□ 0.92
ATG9A-204ENST00000409422 RAB3GAP2Q9H2M9 1393 aa20.78■□□□□ 0.92
ATG9A-204ENST00000409422 EPRSP07814 1512 aaKnown RBP20.78■□□□□ 0.92
ATG9A-204ENST00000409422 CDK13Q14004 1512 aaKnown RBP20.77■□□□□ 0.91
ATG9A-204ENST00000409422 CCDC18Q5T9S5 1454 aa20.75■□□□□ 0.91
ATG9A-204ENST00000409422 ZCCHC11Q5TAX3 1644 aaKnown RBP20.74■□□□□ 0.91
ATG9A-204ENST00000409422 MAPKBP1O60336 1514 aa20.73■□□□□ 0.91
ATG9A-204ENST00000409422 KDM5BQ9UGL1 1544 aa20.72■□□□□ 0.91
ATG9A-204ENST00000409422 ATP10BO94823 1461 aa20.71■□□□□ 0.91
ATG9A-204ENST00000409422 MAGI3Q5TCQ9 1506 aa20.69■□□□□ 0.9
ATG9A-204ENST00000409422 DNAJC5Q9H3Z4 198 aa20.69■□□□□ 0.9
ATG9A-204ENST00000409422 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
ATG9A-204ENST00000409422 SETD5Q9C0A6 1442 aa20.67■□□□□ 0.9
ATG9A-204ENST00000409422 ARID3CA6NKF2 412 aa20.65■□□□□ 0.9
ATG9A-204ENST00000409422 FAM50AQ14320 339 aaKnown RBP20.65■□□□□ 0.9
ATG9A-204ENST00000409422 CYB5RLQ6IPT4 315 aa20.65■□□□□ 0.9
ATG9A-204ENST00000409422 EHBP1L1Q8N3D4 1523 aa20.62■□□□□ 0.89
ATG9A-204ENST00000409422 SIN3AQ96ST3 1273 aa20.57■□□□□ 0.88
ATG9A-204ENST00000409422 KIF14Q15058 1648 aa20.56■□□□□ 0.88
ATG9A-204ENST00000409422 SUPT6HQ7KZ85 1726 aaKnown RBP20.55■□□□□ 0.88
ATG9A-204ENST00000409422 TROQ12816 1431 aaPredicted RBP20.55■□□□□ 0.88
ATG9A-204ENST00000409422 MTUS2Q5JR59 1369 aa20.53■□□□□ 0.88
ATG9A-204ENST00000409422 WDR7Q9Y4E6 1490 aa20.51■□□□□ 0.87
ATG9A-204ENST00000409422 ASXL2Q76L83 1435 aa20.51■□□□□ 0.87
ATG9A-204ENST00000409422 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.5■□□□□ 0.87
ATG9A-204ENST00000409422 CDK11AQ9UQ88 783 aaPredicted RBP20.48■□□□□ 0.87
ATG9A-204ENST00000409422 NCOA2Q15596 1464 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms