RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 KDM2AQ9Y2K7 1162 aa14.26□□□□□ -0.13
PBRM1-205ENST00000409057 TNIKQ9UKE5 1360 aa14.26□□□□□ -0.13
PBRM1-205ENST00000409057 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
PBRM1-205ENST00000409057 RRP7BPQ9NSQ0 103 aa14.24□□□□□ -0.13
PBRM1-205ENST00000409057 WDR43Q15061 677 aaKnown RBP eCLIP14.23□□□□□ -0.13
PBRM1-205ENST00000409057 ESF1Q9H501 851 aaKnown RBP14.23□□□□□ -0.13
PBRM1-205ENST00000409057 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
PBRM1-205ENST00000409057 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
PBRM1-205ENST00000409057 DDRGK1Q96HY6 314 aa14.21□□□□□ -0.13
PBRM1-205ENST00000409057 CHMP7Q8WUX9 453 aaPredicted RBP14.2□□□□□ -0.14
PBRM1-205ENST00000409057 CEP164Q9UPV0 1460 aa14.19□□□□□ -0.14
PBRM1-205ENST00000409057 ARXQ96QS3 562 aa14.19□□□□□ -0.14
PBRM1-205ENST00000409057 NACADO15069 1562 aa14.17□□□□□ -0.14
PBRM1-205ENST00000409057 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
PBRM1-205ENST00000409057 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
PBRM1-205ENST00000409057 BECN1Q14457 450 aa14.15□□□□□ -0.14
PBRM1-205ENST00000409057 BAZ1BQ9UIG0 1483 aaKnown RBP14.15□□□□□ -0.14
PBRM1-205ENST00000409057 PPM1GO15355 546 aaPredicted RBP14.12□□□□□ -0.15
PBRM1-205ENST00000409057 PPP4R2Q9NY27 417 aa14.11□□□□□ -0.15
PBRM1-205ENST00000409057 PLEKHD1A6NEE1 506 aa14.1□□□□□ -0.15
PBRM1-205ENST00000409057 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
PBRM1-205ENST00000409057 CECR2Q9BXF3 1484 aa14.08□□□□□ -0.16
PBRM1-205ENST00000409057 TRIM44Q96DX7 344 aaPredicted RBP14.07□□□□□ -0.16
PBRM1-205ENST00000409057 SIN3AQ96ST3 1273 aa14.06□□□□□ -0.16
PBRM1-205ENST00000409057 RGL3Q3MIN7 710 aa14.06□□□□□ -0.16
PBRM1-205ENST00000409057 CFDP1Q9UEE9 299 aaPredicted RBP14.06□□□□□ -0.16
PBRM1-205ENST00000409057 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
PBRM1-205ENST00000409057 MYH16Q9H6N6 1097 aa14.04□□□□□ -0.16
PBRM1-205ENST00000409057 NOP58Q9Y2X3 529 aaKnown RBP14.04□□□□□ -0.16
PBRM1-205ENST00000409057 KCNH8Q96L42 1107 aa14.03□□□□□ -0.16
PBRM1-205ENST00000409057 GOLGA6L22H0YM25 854 aa14.03□□□□□ -0.16
PBRM1-205ENST00000409057 PLPPR3Q6T4P5 718 aa14.02□□□□□ -0.16
PBRM1-205ENST00000409057 CCNB3Q8WWL7 1395 aa14.02□□□□□ -0.16
PBRM1-205ENST00000409057 SOGA1O94964 1423 aa14.02□□□□□ -0.17
PBRM1-205ENST00000409057 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
PBRM1-205ENST00000409057 SENP3-EIF4A1A0A087X0R7 540 aa13.99□□□□□ -0.17
PBRM1-205ENST00000409057 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
PBRM1-205ENST00000409057 FHAD1B1AJZ9 1412 aa13.97□□□□□ -0.17
PBRM1-205ENST00000409057 NCLP19338 710 aaKnown RBP13.96□□□□□ -0.17
PBRM1-205ENST00000409057 CDCA8Q53HL2 280 aa13.96□□□□□ -0.17
PBRM1-205ENST00000409057 TIMELESSQ9UNS1 1208 aa13.96□□□□□ -0.17
PBRM1-205ENST00000409057 KNSTRNQ9Y448 316 aa13.96□□□□□ -0.18
PBRM1-205ENST00000409057 CCER2I3L3R5 266 aa13.95□□□□□ -0.18
PBRM1-205ENST00000409057 B4GALNT3Q6L9W6 998 aa13.95□□□□□ -0.18
PBRM1-205ENST00000409057 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
PBRM1-205ENST00000409057 CARMIL1Q5VZK9 1371 aa13.94□□□□□ -0.18
PBRM1-205ENST00000409057 VPS8Q8N3P4 1428 aa13.93□□□□□ -0.18
PBRM1-205ENST00000409057 RTN4Q9NQC3 1192 aaKnown RBP13.92□□□□□ -0.18
PBRM1-205ENST00000409057 CFAP53Q96M91 514 aa13.92□□□□□ -0.18
PBRM1-205ENST00000409057 SENP3Q9H4L4 574 aaPredicted RBP13.91□□□□□ -0.18
PBRM1-205ENST00000409057 CUX2O14529 1486 aa13.91□□□□□ -0.18
PBRM1-205ENST00000409057 DEKP35659 375 aaKnown RBP13.9□□□□□ -0.18
PBRM1-205ENST00000409057 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
PBRM1-205ENST00000409057 RGS3P49796 1198 aa13.89□□□□□ -0.19
PBRM1-205ENST00000409057 PPP1R15AO75807 674 aaPredicted RBP13.89□□□□□ -0.19
PBRM1-205ENST00000409057 MROH2BQ7Z745 1585 aa13.89□□□□□ -0.19
PBRM1-205ENST00000409057 NAP1L5Q96NT1 182 aaPredicted RBP13.88□□□□□ -0.19
PBRM1-205ENST00000409057 PTMAP06454 111 aaKnown RBP13.88□□□□□ -0.19
PBRM1-205ENST00000409057 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
PBRM1-205ENST00000409057 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
PBRM1-205ENST00000409057 SETD5Q9C0A6 1442 aa13.86□□□□□ -0.19
PBRM1-205ENST00000409057 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
PBRM1-205ENST00000409057 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
PBRM1-205ENST00000409057 NEUROD2Q15784 382 aa13.84□□□□□ -0.19
PBRM1-205ENST00000409057 CASC1Q6TDU7 716 aa13.83□□□□□ -0.19
PBRM1-205ENST00000409057 DNTTIP2Q5QJE6 756 aaKnown RBP13.83□□□□□ -0.2
PBRM1-205ENST00000409057 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
PBRM1-205ENST00000409057 DCAF11Q8TEB1 546 aa13.81□□□□□ -0.2
PBRM1-205ENST00000409057 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
PBRM1-205ENST00000409057 MS4A1P11836 297 aa13.8□□□□□ -0.2
PBRM1-205ENST00000409057 FRAT1Q92837 279 aaPredicted RBP13.8□□□□□ -0.2
PBRM1-205ENST00000409057 ARHGAP35Q9NRY4 1499 aa13.79□□□□□ -0.2
PBRM1-205ENST00000409057 HSPA5P11021 654 aaKnown RBP13.79□□□□□ -0.2
PBRM1-205ENST00000409057 C14orf37Q86TY3 774 aa13.79□□□□□ -0.2
PBRM1-205ENST00000409057 NUDCQ9Y266 331 aa13.79□□□□□ -0.2
PBRM1-205ENST00000409057 MAPK8IP3Q9UPT6 1336 aa13.78□□□□□ -0.2
PBRM1-205ENST00000409057 L1TD1Q5T7N2 865 aaKnown RBP13.78□□□□□ -0.2
PBRM1-205ENST00000409057 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
PBRM1-205ENST00000409057 TMF1P82094 1093 aa13.78□□□□□ -0.2
PBRM1-205ENST00000409057 EIF4G1Q04637 1599 aaKnown RBP13.77□□□□□ -0.21
PBRM1-205ENST00000409057 RAB3GAP2Q9H2M9 1393 aa13.77□□□□□ -0.21
PBRM1-205ENST00000409057 HSP90AB1P08238 724 aaKnown RBP13.76□□□□□ -0.21
PBRM1-205ENST00000409057 ZBTB7CA1YPR0 619 aa13.76□□□□□ -0.21
PBRM1-205ENST00000409057 ZRSR1Q15695 479 aaKnown RBP13.76□□□□□ -0.21
PBRM1-205ENST00000409057 PLEKHG5O94827 1062 aa13.75□□□□□ -0.21
PBRM1-205ENST00000409057 POGKQ9P215 609 aa13.74□□□□□ -0.21
PBRM1-205ENST00000409057 ERCC6Q03468 1493 aa13.73□□□□□ -0.21
PBRM1-205ENST00000409057 PKD2Q13563 968 aa13.73□□□□□ -0.21
PBRM1-205ENST00000409057 HSCBQ8IWL3 235 aa13.73□□□□□ -0.21
PBRM1-205ENST00000409057 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
PBRM1-205ENST00000409057 FOXD1Q16676 465 aa13.72□□□□□ -0.21
PBRM1-205ENST00000409057 CDK11BP21127 795 aaKnown RBP13.71□□□□□ -0.22
PBRM1-205ENST00000409057 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
PBRM1-205ENST00000409057 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
PBRM1-205ENST00000409057 SMARCA2P51531 1590 aa13.69□□□□□ -0.22
PBRM1-205ENST00000409057 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
PBRM1-205ENST00000409057 PLCB2Q00722 1185 aa13.69□□□□□ -0.22
PBRM1-205ENST00000409057 ARID4BQ4LE39 1312 aaPredicted RBP13.68□□□□□ -0.22
PBRM1-205ENST00000409057 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
PBRM1-205ENST00000409057 TPRNQ4KMQ1 711 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 411.7 ms