RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
SNORD88B-201ENST00000408454 KIAA0586Q9BVV6 1533 aa21.98■■□□□ 1.11
SNORD88B-201ENST00000408454 NPM1P06748 294 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNORD88B-201ENST00000408454 CARMIL1Q5VZK9 1371 aa21.93■■□□□ 1.1
SNORD88B-201ENST00000408454 CARMIL2Q6F5E8 1435 aa21.9■■□□□ 1.1
SNORD88B-201ENST00000408454 ERCC6L2Q5T890 1561 aa21.87■■□□□ 1.09
SNORD88B-201ENST00000408454 RAPGEF2Q9Y4G8 1499 aa21.79■■□□□ 1.08
SNORD88B-201ENST00000408454 FAM9AQ8IZU1 332 aaPredicted RBP21.79■■□□□ 1.08
SNORD88B-201ENST00000408454 IQGAP2Q13576 1575 aa21.78■■□□□ 1.08
SNORD88B-201ENST00000408454 TNIKQ9UKE5 1360 aa21.74■■□□□ 1.07
SNORD88B-201ENST00000408454 PTPRGP23470 1445 aa21.74■■□□□ 1.07
SNORD88B-201ENST00000408454 MAPKBP1O60336 1514 aa21.74■■□□□ 1.07
SNORD88B-201ENST00000408454 GOLGA3Q08378 1498 aa21.65■■□□□ 1.06
SNORD88B-201ENST00000408454 ABCC10Q5T3U5 1492 aa21.64■■□□□ 1.06
SNORD88B-201ENST00000408454 UGGT2Q9NYU1 1516 aa21.63■■□□□ 1.05
SNORD88B-201ENST00000408454 ADCY10Q96PN6 1610 aa21.62■■□□□ 1.05
SNORD88B-201ENST00000408454 FAM69CQ0P6D2 419 aa21.61■■□□□ 1.05
SNORD88B-201ENST00000408454 EEA1Q15075 1411 aa21.61■■□□□ 1.05
SNORD88B-201ENST00000408454 UHRF1BP1LA0JNW5 1464 aa21.6■■□□□ 1.05
SNORD88B-201ENST00000408454 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
SNORD88B-201ENST00000408454 PLB1Q6P1J6 1458 aa21.58■■□□□ 1.05
SNORD88B-201ENST00000408454 UACAQ9BZF9 1416 aa21.57■■□□□ 1.04
SNORD88B-201ENST00000408454 CTTNBP2Q8WZ74 1663 aa21.56■■□□□ 1.04
SNORD88B-201ENST00000408454 DIP2BQ9P265 1576 aa21.54■■□□□ 1.04
SNORD88B-201ENST00000408454 KIF13AQ9H1H9 1805 aa21.54■■□□□ 1.04
SNORD88B-201ENST00000408454 DISP1Q96F81 1524 aa21.53■■□□□ 1.04
SNORD88B-201ENST00000408454 TTBK1Q5TCY1 1321 aaPredicted RBP21.53■■□□□ 1.04
SNORD88B-201ENST00000408454 PRXQ9BXM0 1461 aa21.52■■□□□ 1.04
SNORD88B-201ENST00000408454 KIAA0556O60303 1618 aa21.52■■□□□ 1.04
SNORD88B-201ENST00000408454 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
SNORD88B-201ENST00000408454 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
SNORD88B-201ENST00000408454 ASXL2Q76L83 1435 aa21.45■■□□□ 1.02
SNORD88B-201ENST00000408454 KDM5BQ9UGL1 1544 aa21.45■■□□□ 1.02
SNORD88B-201ENST00000408454 GLI2P10070 1586 aa21.43■■□□□ 1.02
SNORD88B-201ENST00000408454 TEX14Q8IWB6 1497 aa21.4■■□□□ 1.02
SNORD88B-201ENST00000408454 KDM6BO15054 1643 aa21.4■■□□□ 1.02
SNORD88B-201ENST00000408454 ZCCHC11Q5TAX3 1644 aaKnown RBP21.33■■□□□ 1.01
SNORD88B-201ENST00000408454 WDR7Q9Y4E6 1490 aa21.33■■□□□ 1.01
SNORD88B-201ENST00000408454 EPRSP07814 1512 aaKnown RBP21.31■■□□□ 1
SNORD88B-201ENST00000408454 ABCA8O94911 1581 aa21.29■■□□□ 1
SNORD88B-201ENST00000408454 TSPOAP1O95153 1857 aa21.27■■□□□ 1
SNORD88B-201ENST00000408454 KIF21BO75037 1637 aa21.24■□□□□ 0.99
SNORD88B-201ENST00000408454 MAP3K4Q9Y6R4 1608 aa21.23■□□□□ 0.99
SNORD88B-201ENST00000408454 EFCAB5A4FU69 1503 aa21.23■□□□□ 0.99
SNORD88B-201ENST00000408454 SAMD9Q5K651 1589 aa21.23■□□□□ 0.99
SNORD88B-201ENST00000408454 CFAP43Q8NDM7 1665 aa21.21■□□□□ 0.99
SNORD88B-201ENST00000408454 PHLDB1Q86UU1 1377 aa21.18■□□□□ 0.98
SNORD88B-201ENST00000408454 CD109Q6YHK3 1445 aa21.18■□□□□ 0.98
SNORD88B-201ENST00000408454 MAGI3Q5TCQ9 1506 aa21.18■□□□□ 0.98
SNORD88B-201ENST00000408454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
SNORD88B-201ENST00000408454 HNRNPUL2Q1KMD3 747 aaKnown RBP21.15■□□□□ 0.98
SNORD88B-201ENST00000408454 RAPGEF6Q8TEU7 1601 aa21.15■□□□□ 0.98
SNORD88B-201ENST00000408454 P3H3Q8IVL6 736 aa21.14■□□□□ 0.97
SNORD88B-201ENST00000408454 KCNH8Q96L42 1107 aa21.14■□□□□ 0.97
SNORD88B-201ENST00000408454 PPRC1Q5VV67 1664 aaKnown RBP21.12■□□□□ 0.97
SNORD88B-201ENST00000408454 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
SNORD88B-201ENST00000408454 ATP10BO94823 1461 aa21.09■□□□□ 0.97
SNORD88B-201ENST00000408454 PLEKHD1A6NEE1 506 aa21.07■□□□□ 0.96
SNORD88B-201ENST00000408454 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
SNORD88B-201ENST00000408454 FMN1Q68DA7 1419 aa21.06■□□□□ 0.96
SNORD88B-201ENST00000408454 CDK11AQ9UQ88 783 aaPredicted RBP21.04■□□□□ 0.96
SNORD88B-201ENST00000408454 RANGAP1P46060 587 aaPredicted RBP21.03■□□□□ 0.96
SNORD88B-201ENST00000408454 ABCA9Q8IUA7 1624 aa21.03■□□□□ 0.96
SNORD88B-201ENST00000408454 FHOD3Q2V2M9 1422 aa21.03■□□□□ 0.96
SNORD88B-201ENST00000408454 NEO1Q92859 1461 aa21.01■□□□□ 0.95
SNORD88B-201ENST00000408454 NUP153P49790 1475 aaKnown RBP21■□□□□ 0.95
SNORD88B-201ENST00000408454 ARAP3Q8WWN8 1544 aa20.99■□□□□ 0.95
SNORD88B-201ENST00000408454 ARID3CA6NKF2 412 aa20.98■□□□□ 0.95
SNORD88B-201ENST00000408454 CFAP74Q9C0B2 1584 aa20.97■□□□□ 0.95
SNORD88B-201ENST00000408454 HECW1Q76N89 1606 aa20.94■□□□□ 0.94
SNORD88B-201ENST00000408454 COL17A1Q9UMD9 1497 aaPredicted RBP20.93■□□□□ 0.94
SNORD88B-201ENST00000408454 ADGRL1O94910 1474 aa20.91■□□□□ 0.94
SNORD88B-201ENST00000408454 KDM4FA0A1W2PPD8 638 aa20.89■□□□□ 0.93
SNORD88B-201ENST00000408454 CLIP1P30622 1438 aa20.88■□□□□ 0.93
SNORD88B-201ENST00000408454 ATP1B4Q9UN42 357 aaPredicted RBP20.87■□□□□ 0.93
SNORD88B-201ENST00000408454 ARHGAP35Q9NRY4 1499 aa20.84■□□□□ 0.93
SNORD88B-201ENST00000408454 FANCAO15360 1455 aa20.83■□□□□ 0.93
SNORD88B-201ENST00000408454 DENND4BO75064 1496 aaPredicted RBP20.82■□□□□ 0.92
SNORD88B-201ENST00000408454 CCDC18Q5T9S5 1454 aa20.81■□□□□ 0.92
SNORD88B-201ENST00000408454 EHMT2Q96KQ7 1210 aa20.79■□□□□ 0.92
SNORD88B-201ENST00000408454 AKNAQ7Z591 1439 aa20.78■□□□□ 0.92
SNORD88B-201ENST00000408454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.78■□□□□ 0.92
SNORD88B-201ENST00000408454 KIF14Q15058 1648 aa20.78■□□□□ 0.92
SNORD88B-201ENST00000408454 MAGI2Q86UL8 1455 aa20.77■□□□□ 0.92
SNORD88B-201ENST00000408454 EFCAB2Q5VUJ9 269 aa20.77■□□□□ 0.92
SNORD88B-201ENST00000408454 POGZQ7Z3K3 1410 aa20.77■□□□□ 0.91
SNORD88B-201ENST00000408454 CDK13Q14004 1512 aaKnown RBP20.76■□□□□ 0.91
SNORD88B-201ENST00000408454 PLCH2O75038 1416 aa20.75■□□□□ 0.91
SNORD88B-201ENST00000408454 TROQ12816 1431 aaPredicted RBP20.75■□□□□ 0.91
SNORD88B-201ENST00000408454 CASKIN1Q8WXD9 1431 aa20.73■□□□□ 0.91
SNORD88B-201ENST00000408454 RAPGEF3O95398 923 aa20.73■□□□□ 0.91
SNORD88B-201ENST00000408454 ARID4BQ4LE39 1312 aaPredicted RBP20.72■□□□□ 0.91
SNORD88B-201ENST00000408454 FYCO1Q9BQS8 1478 aa20.71■□□□□ 0.91
SNORD88B-201ENST00000408454 TTC37Q6PGP7 1564 aa20.71■□□□□ 0.91
SNORD88B-201ENST00000408454 MYO5CQ9NQX4 1742 aa20.7■□□□□ 0.9
SNORD88B-201ENST00000408454 ZMYM4Q5VZL5 1548 aa20.69■□□□□ 0.9
SNORD88B-201ENST00000408454 ARHGEF40Q8TER5 1519 aa20.69■□□□□ 0.9
SNORD88B-201ENST00000408454 RICTORQ6R327 1708 aa20.65■□□□□ 0.9
SNORD88B-201ENST00000408454 ZFYVE16Q7Z3T8 1539 aa20.65■□□□□ 0.9
SNORD88B-201ENST00000408454 ZNF518AQ6AHZ1 1483 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms