RNA–Protein interactions for RNA: ENST00000407029.5

MKL1-205, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-205ENST00000407029 VPS8Q8N3P4 1428 aa18.44■□□□□ 0.54
MKL1-205ENST00000407029 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
MKL1-205ENST00000407029 KANK4Q5T7N3 995 aaPredicted RBP18.39■□□□□ 0.53
MKL1-205ENST00000407029 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
MKL1-205ENST00000407029 PRKCSHP14314 528 aaPredicted RBP18.36■□□□□ 0.53
MKL1-205ENST00000407029 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
MKL1-205ENST00000407029 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
MKL1-205ENST00000407029 BCANQ96GW7 911 aa18.34■□□□□ 0.53
MKL1-205ENST00000407029 GAPVD1Q14C86 1478 aa18.32■□□□□ 0.52
MKL1-205ENST00000407029 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.524e-6■□□□□ 10.8
MKL1-205ENST00000407029 POLA1P09884 1462 aaPredicted RBP18.31■□□□□ 0.52
MKL1-205ENST00000407029 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
MKL1-205ENST00000407029 FHOD3Q2V2M9 1422 aa18.3■□□□□ 0.52
MKL1-205ENST00000407029 MIER1Q8N108 512 aa18.28■□□□□ 0.52
MKL1-205ENST00000407029 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
MKL1-205ENST00000407029 DNMBPQ6XZF7 1577 aa18.22■□□□□ 0.51
MKL1-205ENST00000407029 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
MKL1-205ENST00000407029 KIF21BO75037 1637 aa18.21■□□□□ 0.51
MKL1-205ENST00000407029 KCNH8Q96L42 1107 aa18.21■□□□□ 0.51
MKL1-205ENST00000407029 PLEKHD1A6NEE1 506 aa18.21■□□□□ 0.51
MKL1-205ENST00000407029 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
MKL1-205ENST00000407029 NEFLP07196 543 aa18.2■□□□□ 0.5
MKL1-205ENST00000407029 RRP7BPQ9NSQ0 103 aa18.18■□□□□ 0.5
MKL1-205ENST00000407029 POLR3GLQ9BT43 218 aa18.16■□□□□ 0.5
MKL1-205ENST00000407029 NPM1P06748 294 aaKnown RBP eCLIP18.16■□□□□ 0.5
MKL1-205ENST00000407029 CCNB3Q8WWL7 1395 aa18.16■□□□□ 0.5
MKL1-205ENST00000407029 FMN1Q68DA7 1419 aa18.15■□□□□ 0.5
MKL1-205ENST00000407029 URB2Q14146 1524 aaKnown RBP18.15■□□□□ 0.5
MKL1-205ENST00000407029 JPH4Q96JJ6 628 aa18.15■□□□□ 0.5
MKL1-205ENST00000407029 TSHZ2Q9NRE2 1034 aa18.13■□□□□ 0.49
MKL1-205ENST00000407029 SUPT16HQ9Y5B9 1047 aaKnown RBP18.13■□□□□ 0.49
MKL1-205ENST00000407029 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
MKL1-205ENST00000407029 ZNF326Q5BKZ1 582 aaKnown RBP18.11■□□□□ 0.49
MKL1-205ENST00000407029 BIVM-ERCC5R4GMW8 1640 aa18.11■□□□□ 0.49
MKL1-205ENST00000407029 CFDP1Q9UEE9 299 aaPredicted RBP18.11■□□□□ 0.49
MKL1-205ENST00000407029 ARAP1Q96P48 1450 aa18.09■□□□□ 0.49
MKL1-205ENST00000407029 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.49
MKL1-205ENST00000407029 ABCA10Q8WWZ4 1543 aa18.08■□□□□ 0.49
MKL1-205ENST00000407029 CARMIL2Q6F5E8 1435 aa18.08■□□□□ 0.48
MKL1-205ENST00000407029 TSPY4P0CV99 314 aa18.07■□□□□ 0.48
MKL1-205ENST00000407029 TSPY10P0CW01 314 aa18.07■□□□□ 0.48
MKL1-205ENST00000407029 GRIN2BQ13224 1484 aa18.07■□□□□ 0.48
MKL1-205ENST00000407029 CLSPNQ9HAW4 1339 aa18.06■□□□□ 0.48
MKL1-205ENST00000407029 ARHGAP35Q9NRY4 1499 aa18.06■□□□□ 0.48
MKL1-205ENST00000407029 IFT140Q96RY7 1462 aa18.03■□□□□ 0.48
MKL1-205ENST00000407029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.47
MKL1-205ENST00000407029 TONSLQ96HA7 1378 aa17.97■□□□□ 0.47
MKL1-205ENST00000407029 ZNF608Q9ULD9 1512 aaPredicted RBP17.96■□□□□ 0.47
MKL1-205ENST00000407029 FKBP8Q14318 412 aa17.95■□□□□ 0.46
MKL1-205ENST00000407029 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
MKL1-205ENST00000407029 SLC4A1APQ9BWU0 796 aaKnown RBP17.92■□□□□ 0.46
MKL1-205ENST00000407029 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
MKL1-205ENST00000407029 PTPRGP23470 1445 aa17.87■□□□□ 0.45
MKL1-205ENST00000407029 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
MKL1-205ENST00000407029 HIRIP3Q9BW71 556 aaPredicted RBP17.87■□□□□ 0.45
MKL1-205ENST00000407029 RAB3GAP2Q9H2M9 1393 aa17.86■□□□□ 0.45
MKL1-205ENST00000407029 SETD5Q9C0A6 1442 aa17.85■□□□□ 0.45
MKL1-205ENST00000407029 PHLDB1Q86UU1 1377 aa17.84■□□□□ 0.45
MKL1-205ENST00000407029 CASKIN1Q8WXD9 1431 aa17.83■□□□□ 0.44
MKL1-205ENST00000407029 RBM19Q9Y4C8 960 aaKnown RBP17.83■□□□□ 0.44
MKL1-205ENST00000407029 LRRC9Q6ZRR7 1453 aa17.82■□□□□ 0.44
MKL1-205ENST00000407029 CUL7Q14999 1698 aa17.81■□□□□ 0.44
MKL1-205ENST00000407029 CCDC18Q5T9S5 1454 aa17.8■□□□□ 0.44
MKL1-205ENST00000407029 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
MKL1-205ENST00000407029 KDM2AQ9Y2K7 1162 aa17.78■□□□□ 0.44
MKL1-205ENST00000407029 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
MKL1-205ENST00000407029 OSCARQ8IYS5 282 aa17.77■□□□□ 0.44
MKL1-205ENST00000407029 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
MKL1-205ENST00000407029 FOXD1Q16676 465 aa17.76■□□□□ 0.43
MKL1-205ENST00000407029 RTL5Q5HYW3 569 aaPredicted RBP17.76■□□□□ 0.43
MKL1-205ENST00000407029 CHGAP10645 457 aaKnown RBP17.75■□□□□ 0.43
MKL1-205ENST00000407029 HNRNPMP52272 730 aaKnown RBP eCLIP17.75■□□□□ 0.43
MKL1-205ENST00000407029 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
MKL1-205ENST00000407029 PRG4Q92954 1404 aaPredicted RBP17.75■□□□□ 0.43
MKL1-205ENST00000407029 ZNF644Q9H582 1327 aaPredicted RBP17.74■□□□□ 0.43
MKL1-205ENST00000407029 KIAA0586Q9BVV6 1533 aa17.74■□□□□ 0.43
MKL1-205ENST00000407029 GRIN2AQ12879 1464 aa17.73■□□□□ 0.43
MKL1-205ENST00000407029 NBR1Q14596 966 aa17.72■□□□□ 0.43
MKL1-205ENST00000407029 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
MKL1-205ENST00000407029 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
MKL1-205ENST00000407029 DEKP35659 375 aaKnown RBP17.72■□□□□ 0.43
MKL1-205ENST00000407029 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
MKL1-205ENST00000407029 RGL3Q3MIN7 710 aa17.7■□□□□ 0.42
MKL1-205ENST00000407029 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
MKL1-205ENST00000407029 ANP32CO43423 234 aa17.69■□□□□ 0.42
MKL1-205ENST00000407029 EIF5BO60841 1220 aaKnown RBP17.69■□□□□ 0.42
MKL1-205ENST00000407029 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
MKL1-205ENST00000407029 NCOA2Q15596 1464 aa17.69■□□□□ 0.42
MKL1-205ENST00000407029 MAGI1Q96QZ7 1491 aaPredicted RBP17.68■□□□□ 0.42
MKL1-205ENST00000407029 PCF11O94913 1555 aaKnown RBP17.67■□□□□ 0.42
MKL1-205ENST00000407029 EFCAB2Q5VUJ9 269 aa17.67■□□□□ 0.42
MKL1-205ENST00000407029 DHX57Q6P158 1386 aaKnown RBP17.67■□□□□ 0.42
MKL1-205ENST00000407029 MYOM3Q5VTT5 1437 aa17.67■□□□□ 0.42
MKL1-205ENST00000407029 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
MKL1-205ENST00000407029 CYB5RLQ6IPT4 315 aa17.66■□□□□ 0.42
MKL1-205ENST00000407029 RTN4Q9NQC3 1192 aaKnown RBP17.65■□□□□ 0.42
MKL1-205ENST00000407029 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
MKL1-205ENST00000407029 CDK13Q14004 1512 aaKnown RBP17.63■□□□□ 0.41
MKL1-205ENST00000407029 MPHOSPH9Q99550 1183 aa17.63■□□□□ 0.41
MKL1-205ENST00000407029 RRBP1Q9P2E9 1410 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms