RNA–Protein interactions for RNA: ENST00000405497.1

PKMP3-201, Transcript of pyruvate kinase M1/2 pseudogene 3, humanhuman

BASIC

Gene PKMP3, Length 715 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMP3-201ENST00000405497 RIMBP3Q9UFD9 1639 aa13.09□□□□□ -0.31
PKMP3-201ENST00000405497 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
PKMP3-201ENST00000405497 CUL7Q14999 1698 aa13.07□□□□□ -0.32
PKMP3-201ENST00000405497 KIAA0586Q9BVV6 1533 aa13.04□□□□□ -0.32
PKMP3-201ENST00000405497 PRG4Q92954 1404 aaPredicted RBP13.03□□□□□ -0.32
PKMP3-201ENST00000405497 PRXQ9BXM0 1461 aa13.03□□□□□ -0.32
PKMP3-201ENST00000405497 EEA1Q15075 1411 aa13.02□□□□□ -0.33
PKMP3-201ENST00000405497 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
PKMP3-201ENST00000405497 ARAP1Q96P48 1450 aa13.01□□□□□ -0.33
PKMP3-201ENST00000405497 ERCC6L2Q5T890 1561 aa13□□□□□ -0.33
PKMP3-201ENST00000405497 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
PKMP3-201ENST00000405497 SHROOM2Q13796 1616 aa12.96□□□□□ -0.33
PKMP3-201ENST00000405497 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
PKMP3-201ENST00000405497 RANGAP1P46060 587 aaPredicted RBP12.93□□□□□ -0.34
PKMP3-201ENST00000405497 PTPRGP23470 1445 aa12.91□□□□□ -0.34
PKMP3-201ENST00000405497 CARMIL2Q6F5E8 1435 aa12.91□□□□□ -0.34
PKMP3-201ENST00000405497 P3H3Q8IVL6 736 aa12.91□□□□□ -0.34
PKMP3-201ENST00000405497 IQGAP2Q13576 1575 aa12.9□□□□□ -0.34
PKMP3-201ENST00000405497 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
PKMP3-201ENST00000405497 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
PKMP3-201ENST00000405497 TRHP20396 242 aaPredicted RBP12.87□□□□□ -0.35
PKMP3-201ENST00000405497 DISP1Q96F81 1524 aa12.87□□□□□ -0.35
PKMP3-201ENST00000405497 UGGT2Q9NYU1 1516 aa12.87□□□□□ -0.35
PKMP3-201ENST00000405497 KIF21BO75037 1637 aa12.82□□□□□ -0.36
PKMP3-201ENST00000405497 CTTNBP2Q8WZ74 1663 aa12.81□□□□□ -0.36
PKMP3-201ENST00000405497 GOLGA3Q08378 1498 aa12.81□□□□□ -0.36
PKMP3-201ENST00000405497 LOC105371045A0A1W2PR82 267 aa12.8□□□□□ -0.36
PKMP3-201ENST00000405497 UACAQ9BZF9 1416 aa12.79□□□□□ -0.36
PKMP3-201ENST00000405497 KIAA0556O60303 1618 aa12.77□□□□□ -0.36
PKMP3-201ENST00000405497 ARID3CA6NKF2 412 aa12.74□□□□□ -0.37
PKMP3-201ENST00000405497 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
PKMP3-201ENST00000405497 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
PKMP3-201ENST00000405497 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
PKMP3-201ENST00000405497 UHRF1BP1LA0JNW5 1464 aa12.72□□□□□ -0.37
PKMP3-201ENST00000405497 FHOD3Q2V2M9 1422 aa12.71□□□□□ -0.37
PKMP3-201ENST00000405497 ATP1B4Q9UN42 357 aaPredicted RBP12.7□□□□□ -0.38
PKMP3-201ENST00000405497 ABCC2Q92887 1545 aa12.7□□□□□ -0.38
PKMP3-201ENST00000405497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
PKMP3-201ENST00000405497 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
PKMP3-201ENST00000405497 SAMD9Q5K651 1589 aa12.69□□□□□ -0.38
PKMP3-201ENST00000405497 KCNH8Q96L42 1107 aa12.68□□□□□ -0.38
PKMP3-201ENST00000405497 KDM5BQ9UGL1 1544 aa12.67□□□□□ -0.38
PKMP3-201ENST00000405497 ARHGAP35Q9NRY4 1499 aa12.67□□□□□ -0.38
PKMP3-201ENST00000405497 ABCA8O94911 1581 aa12.67□□□□□ -0.38
PKMP3-201ENST00000405497 ASXL2Q76L83 1435 aa12.65□□□□□ -0.38
PKMP3-201ENST00000405497 ATP10BO94823 1461 aa12.65□□□□□ -0.38
PKMP3-201ENST00000405497 EFCAB5A4FU69 1503 aa12.64□□□□□ -0.39
PKMP3-201ENST00000405497 ABCC10Q5T3U5 1492 aa12.64□□□□□ -0.39
PKMP3-201ENST00000405497 MAPKBP1O60336 1514 aa12.63□□□□□ -0.39
PKMP3-201ENST00000405497 CLIP1P30622 1438 aa12.62□□□□□ -0.39
PKMP3-201ENST00000405497 PLEKHD1A6NEE1 506 aa12.62□□□□□ -0.39
PKMP3-201ENST00000405497 FMN1Q68DA7 1419 aa12.6□□□□□ -0.39
PKMP3-201ENST00000405497 NUP153P49790 1475 aaKnown RBP12.59□□□□□ -0.39
PKMP3-201ENST00000405497 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
PKMP3-201ENST00000405497 RAPGEF6Q8TEU7 1601 aa12.59□□□□□ -0.39
PKMP3-201ENST00000405497 CEP162Q5TB80 1403 aa12.56□□□□□ -0.4
PKMP3-201ENST00000405497 EPRSP07814 1512 aaKnown RBP12.56□□□□□ -0.4
PKMP3-201ENST00000405497 KIF13AQ9H1H9 1805 aa12.55□□□□□ -0.4
PKMP3-201ENST00000405497 WDR7Q9Y4E6 1490 aa12.55□□□□□ -0.4
PKMP3-201ENST00000405497 CDK11AQ9UQ88 783 aaPredicted RBP12.54□□□□□ -0.4
PKMP3-201ENST00000405497 DIP2BQ9P265 1576 aa12.54□□□□□ -0.4
PKMP3-201ENST00000405497 CASKIN1Q8WXD9 1431 aa12.52□□□□□ -0.41
PKMP3-201ENST00000405497 GLI2P10070 1586 aa12.52□□□□□ -0.41
PKMP3-201ENST00000405497 CD109Q6YHK3 1445 aa12.51□□□□□ -0.41
PKMP3-201ENST00000405497 CDK13Q14004 1512 aaKnown RBP12.5□□□□□ -0.41
PKMP3-201ENST00000405497 TSPOAP1O95153 1857 aa12.5□□□□□ -0.41
PKMP3-201ENST00000405497 HECW1Q76N89 1606 aa12.45□□□□□ -0.42
PKMP3-201ENST00000405497 MAP3K4Q9Y6R4 1608 aa12.43□□□□□ -0.42
PKMP3-201ENST00000405497 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
PKMP3-201ENST00000405497 FYCO1Q9BQS8 1478 aa12.42□□□□□ -0.42
PKMP3-201ENST00000405497 COL17A1Q9UMD9 1497 aaPredicted RBP12.42□□□□□ -0.42
PKMP3-201ENST00000405497 TROQ12816 1431 aaPredicted RBP12.42□□□□□ -0.42
PKMP3-201ENST00000405497 MAGI3Q5TCQ9 1506 aa12.42□□□□□ -0.42
PKMP3-201ENST00000405497 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.42
PKMP3-201ENST00000405497 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.42
PKMP3-201ENST00000405497 LRRIQ1Q96JM4 1722 aa12.4□□□□□ -0.42
PKMP3-201ENST00000405497 VPS8Q8N3P4 1428 aa12.4□□□□□ -0.42
PKMP3-201ENST00000405497 EFCAB2Q5VUJ9 269 aa12.4□□□□□ -0.42
PKMP3-201ENST00000405497 PPRC1Q5VV67 1664 aaKnown RBP12.4□□□□□ -0.42
PKMP3-201ENST00000405497 CFAP43Q8NDM7 1665 aa12.39□□□□□ -0.43
PKMP3-201ENST00000405497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.39□□□□□ -0.43
PKMP3-201ENST00000405497 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
PKMP3-201ENST00000405497 ABCA9Q8IUA7 1624 aa12.38□□□□□ -0.43
PKMP3-201ENST00000405497 APLP2Q06481 763 aa12.38□□□□□ -0.43
PKMP3-201ENST00000405497 KANK4Q5T7N3 995 aaPredicted RBP12.38□□□□□ -0.43
PKMP3-201ENST00000405497 MTUS2Q5JR59 1369 aa12.38□□□□□ -0.43
PKMP3-201ENST00000405497 PLCH2O75038 1416 aa12.37□□□□□ -0.43
PKMP3-201ENST00000405497 PHLDB1Q86UU1 1377 aa12.37□□□□□ -0.43
PKMP3-201ENST00000405497 KDM6BO15054 1643 aa12.35□□□□□ -0.43
PKMP3-201ENST00000405497 AKNAQ7Z591 1439 aa12.35□□□□□ -0.43
PKMP3-201ENST00000405497 ZNF777Q9ULD5 760 aaPredicted RBP12.34□□□□□ -0.43
PKMP3-201ENST00000405497 KIF14Q15058 1648 aa12.33□□□□□ -0.43
PKMP3-201ENST00000405497 TTC37Q6PGP7 1564 aa12.33□□□□□ -0.44
PKMP3-201ENST00000405497 NEO1Q92859 1461 aa12.33□□□□□ -0.44
PKMP3-201ENST00000405497 CFDP1Q9UEE9 299 aaPredicted RBP12.32□□□□□ -0.44
PKMP3-201ENST00000405497 FANCAO15360 1455 aa12.32□□□□□ -0.44
PKMP3-201ENST00000405497 ARAP3Q8WWN8 1544 aa12.32□□□□□ -0.44
PKMP3-201ENST00000405497 CCNB3Q8WWL7 1395 aa12.3□□□□□ -0.44
PKMP3-201ENST00000405497 SCAPERQ9BY12 1400 aa12.3□□□□□ -0.44
PKMP3-201ENST00000405497 AFAP1Q8N556 730 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms