RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 SUPT16HQ9Y5B9 1047 aaKnown RBP18.79■□□□□ 0.6
GSE1-203ENST00000405402 RTL5Q5HYW3 569 aaPredicted RBP18.78■□□□□ 0.6
GSE1-203ENST00000405402 NPM2Q86SE8 214 aaKnown RBP18.78■□□□□ 0.6
GSE1-203ENST00000405402 CUX2O14529 1486 aa18.78■□□□□ 0.6
GSE1-203ENST00000405402 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
GSE1-203ENST00000405402 CARMIL1Q5VZK9 1371 aa18.76■□□□□ 0.59
GSE1-203ENST00000405402 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
GSE1-203ENST00000405402 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.591e-6■■■□□ 16.9
GSE1-203ENST00000405402 TMC1Q8TDI8 760 aa18.71■□□□□ 0.59
GSE1-203ENST00000405402 BCL11AQ9H165 835 aa18.7■□□□□ 0.58
GSE1-203ENST00000405402 FOXD1Q16676 465 aa18.7■□□□□ 0.58
GSE1-203ENST00000405402 CHMP7Q8WUX9 453 aaPredicted RBP18.68■□□□□ 0.58
GSE1-203ENST00000405402 RAB3GAP2Q9H2M9 1393 aa18.67■□□□□ 0.58
GSE1-203ENST00000405402 RGL3Q3MIN7 710 aa18.66■□□□□ 0.58
GSE1-203ENST00000405402 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
GSE1-203ENST00000405402 TSPY4P0CV99 314 aa18.63■□□□□ 0.57
GSE1-203ENST00000405402 TSPY10P0CW01 314 aa18.63■□□□□ 0.57
GSE1-203ENST00000405402 CCDC136Q96JN2 1154 aa18.62■□□□□ 0.57
GSE1-203ENST00000405402 SMARCA4P51532 1647 aa18.62■□□□□ 0.57
GSE1-203ENST00000405402 CHGAP10645 457 aaKnown RBP18.6■□□□□ 0.57
GSE1-203ENST00000405402 ATAD2BQ9ULI0 1458 aa18.59■□□□□ 0.57
GSE1-203ENST00000405402 NBR1Q14596 966 aa18.59■□□□□ 0.57
GSE1-203ENST00000405402 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
GSE1-203ENST00000405402 SETD5Q9C0A6 1442 aa18.58■□□□□ 0.56
GSE1-203ENST00000405402 DHX57Q6P158 1386 aaKnown RBP18.57■□□□□ 0.56
GSE1-203ENST00000405402 CFDP1Q9UEE9 299 aaPredicted RBP18.57■□□□□ 0.56
GSE1-203ENST00000405402 ANP32AP39687 249 aaKnown RBP18.56■□□□□ 0.56
GSE1-203ENST00000405402 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
GSE1-203ENST00000405402 CANXP27824 592 aaKnown RBP18.53■□□□□ 0.56
GSE1-203ENST00000405402 FHAD1B1AJZ9 1412 aa18.5■□□□□ 0.55
GSE1-203ENST00000405402 PPP1R15AO75807 674 aaPredicted RBP18.49■□□□□ 0.55
GSE1-203ENST00000405402 B4GALNT3Q6L9W6 998 aa18.49■□□□□ 0.55
GSE1-203ENST00000405402 FHOD3Q2V2M9 1422 aa18.49■□□□□ 0.55
GSE1-203ENST00000405402 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
GSE1-203ENST00000405402 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
GSE1-203ENST00000405402 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
GSE1-203ENST00000405402 EIF4G1Q04637 1599 aaKnown RBP18.45■□□□□ 0.54
GSE1-203ENST00000405402 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
GSE1-203ENST00000405402 ARHGAP35Q9NRY4 1499 aa18.4■□□□□ 0.54
GSE1-203ENST00000405402 ANP32EQ9BTT0 268 aa18.4■□□□□ 0.54
GSE1-203ENST00000405402 TSHZ2Q9NRE2 1034 aa18.39■□□□□ 0.53
GSE1-203ENST00000405402 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
GSE1-203ENST00000405402 MPHOSPH9Q99550 1183 aa18.37■□□□□ 0.53
GSE1-203ENST00000405402 L3MBTL2Q969R5 705 aa18.36■□□□□ 0.53
GSE1-203ENST00000405402 DCAF11Q8TEB1 546 aa18.36■□□□□ 0.53
GSE1-203ENST00000405402 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
GSE1-203ENST00000405402 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
GSE1-203ENST00000405402 TIMELESSQ9UNS1 1208 aa18.35■□□□□ 0.53
GSE1-203ENST00000405402 CCER2I3L3R5 266 aa18.33■□□□□ 0.53
GSE1-203ENST00000405402 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.534e-6■■■□□ 15.6
GSE1-203ENST00000405402 IGF1RP08069 1367 aa18.32■□□□□ 0.52
GSE1-203ENST00000405402 CC2D1BQ5T0F9 858 aaKnown RBP18.32■□□□□ 0.52
GSE1-203ENST00000405402 PKD2Q13563 968 aa18.32■□□□□ 0.52
GSE1-203ENST00000405402 KIF21BO75037 1637 aa18.31■□□□□ 0.52
GSE1-203ENST00000405402 PPP4R2Q9NY27 417 aa18.29■□□□□ 0.52
GSE1-203ENST00000405402 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
GSE1-203ENST00000405402 SYNJ1O43426 1573 aa18.28■□□□□ 0.52
GSE1-203ENST00000405402 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.52
GSE1-203ENST00000405402 ERCC6Q03468 1493 aa18.27■□□□□ 0.51
GSE1-203ENST00000405402 PHLDB1Q86UU1 1377 aa18.25■□□□□ 0.51
GSE1-203ENST00000405402 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
GSE1-203ENST00000405402 NEUROD2Q15784 382 aa18.24■□□□□ 0.51
GSE1-203ENST00000405402 FMN1Q68DA7 1419 aa18.22■□□□□ 0.51
GSE1-203ENST00000405402 ARXQ96QS3 562 aa18.21■□□□□ 0.51
GSE1-203ENST00000405402 TNNT2P45379 298 aaPredicted RBP18.21■□□□□ 0.51
GSE1-203ENST00000405402 RAD54L2Q9Y4B4 1467 aa18.21■□□□□ 0.51
GSE1-203ENST00000405402 STAG3Q9UJ98 1225 aa18.19■□□□□ 0.5
GSE1-203ENST00000405402 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.55e-8■■■■■ 57.5
GSE1-203ENST00000405402 KNSTRNQ9Y448 316 aa18.17■□□□□ 0.5
GSE1-203ENST00000405402 NEFMP07197 916 aa18.16■□□□□ 0.5
GSE1-203ENST00000405402 BICRAQ9NZM4 1560 aa18.15■□□□□ 0.5
GSE1-203ENST00000405402 ZNF644Q9H582 1327 aaPredicted RBP18.15■□□□□ 0.5
GSE1-203ENST00000405402 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
GSE1-203ENST00000405402 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.5
GSE1-203ENST00000405402 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.492e-6■■■□□ 16.3
GSE1-203ENST00000405402 FANCD2Q9BXW9 1451 aa18.13■□□□□ 0.49
GSE1-203ENST00000405402 NUP155O75694 1391 aa18.13■□□□□ 0.49
GSE1-203ENST00000405402 RGS3P49796 1198 aa18.12■□□□□ 0.49
GSE1-203ENST00000405402 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.11■□□□□ 0.49
GSE1-203ENST00000405402 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
GSE1-203ENST00000405402 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
GSE1-203ENST00000405402 CCDC18Q5T9S5 1454 aa18.06■□□□□ 0.48
GSE1-203ENST00000405402 ST20-MTHFSA0A0A6YYL1 179 aa18.05■□□□□ 0.48
GSE1-203ENST00000405402 EIF5BO60841 1220 aaKnown RBP18.04■□□□□ 0.48
GSE1-203ENST00000405402 FRAT1Q92837 279 aaPredicted RBP18.04■□□□□ 0.48
GSE1-203ENST00000405402 LRRC9Q6ZRR7 1453 aa18.03■□□□□ 0.48
GSE1-203ENST00000405402 PRXQ9BXM0 1461 aa18.03■□□□□ 0.48
GSE1-203ENST00000405402 NESP48681 1621 aa18.03■□□□□ 0.48
GSE1-203ENST00000405402 PPM1GO15355 546 aaPredicted RBP18.03■□□□□ 0.48
GSE1-203ENST00000405402 NOP58Q9Y2X3 529 aaKnown RBP18.03■□□□□ 0.48
GSE1-203ENST00000405402 SAFB2Q14151 953 aaKnown RBP eCLIP18.01■□□□□ 0.472e-7■□□□□ 9.6
GSE1-203ENST00000405402 JPH4Q96JJ6 628 aa18.01■□□□□ 0.47
GSE1-203ENST00000405402 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
GSE1-203ENST00000405402 UPF2Q9HAU5 1272 aaKnown RBP18■□□□□ 0.47
GSE1-203ENST00000405402 PLEKHG5O94827 1062 aa18■□□□□ 0.47
GSE1-203ENST00000405402 TMF1P82094 1093 aa18■□□□□ 0.47
GSE1-203ENST00000405402 RTN4Q9NQC3 1192 aaKnown RBP17.99■□□□□ 0.47
GSE1-203ENST00000405402 HSP90AA1P07900 732 aaKnown RBP17.99■□□□□ 0.47
GSE1-203ENST00000405402 FGD6Q6ZV73 1430 aa17.99■□□□□ 0.47
GSE1-203ENST00000405402 RRBP1Q9P2E9 1410 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms