RNA–Protein interactions for RNA: ENST00000405356.5

NOLC1-202, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best) BASIC

Gene NOLC1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-202ENST00000405356 CENPBP07199 599 aaPredicted RBP12.77□□□□□ -0.37
NOLC1-202ENST00000405356 KIF21AQ7Z4S6 1674 aa12.74□□□□□ -0.37
NOLC1-202ENST00000405356 KIF21BO75037 1637 aa12.74□□□□□ -0.37
NOLC1-202ENST00000405356 VPS8Q8N3P4 1428 aa12.74□□□□□ -0.37
NOLC1-202ENST00000405356 PRXQ9BXM0 1461 aa12.73□□□□□ -0.37
NOLC1-202ENST00000405356 ABCA10Q8WWZ4 1543 aa12.72□□□□□ -0.37
NOLC1-202ENST00000405356 FHOD3Q2V2M9 1422 aa12.71□□□□□ -0.37
NOLC1-202ENST00000405356 PRDM2Q13029 1718 aa12.71□□□□□ -0.37
NOLC1-202ENST00000405356 IFT140Q96RY7 1462 aa12.7□□□□□ -0.38
NOLC1-202ENST00000405356 MTUS2Q5JR59 1369 aa12.7□□□□□ -0.38
NOLC1-202ENST00000405356 CDK11AQ9UQ88 783 aaPredicted RBP12.69□□□□□ -0.38
NOLC1-202ENST00000405356 GRIN2BQ13224 1484 aa12.68□□□□□ -0.38
NOLC1-202ENST00000405356 MYT1LQ9UL68 1186 aa12.68□□□□□ -0.38
NOLC1-202ENST00000405356 KANK4Q5T7N3 995 aaPredicted RBP12.68□□□□□ -0.38
NOLC1-202ENST00000405356 ZNF777Q9ULD5 760 aaPredicted RBP12.68□□□□□ -0.38
NOLC1-202ENST00000405356 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
NOLC1-202ENST00000405356 ZNF608Q9ULD9 1512 aaPredicted RBP12.67□□□□□ -0.38
NOLC1-202ENST00000405356 FHAD1B1AJZ9 1412 aa12.66□□□□□ -0.38
NOLC1-202ENST00000405356 MYT1Q01538 1121 aa12.65□□□□□ -0.38
NOLC1-202ENST00000405356 JPH4Q96JJ6 628 aa12.63□□□□□ -0.39
NOLC1-202ENST00000405356 SNAPC4Q5SXM2 1469 aa12.62□□□□□ -0.39
NOLC1-202ENST00000405356 ARAP1Q96P48 1450 aa12.58□□□□□ -0.39
NOLC1-202ENST00000405356 FMN1Q68DA7 1419 aa12.58□□□□□ -0.39
NOLC1-202ENST00000405356 ARHGAP35Q9NRY4 1499 aa12.58□□□□□ -0.4
NOLC1-202ENST00000405356 CARMIL2Q6F5E8 1435 aa12.58□□□□□ -0.4
NOLC1-202ENST00000405356 TRIM52Q96A61 297 aa12.58□□□□□ -0.4
NOLC1-202ENST00000405356 KCNH8Q96L42 1107 aa12.58□□□□□ -0.4
NOLC1-202ENST00000405356 CHIC2Q9UKJ5 165 aa12.58□□□□□ -0.4
NOLC1-202ENST00000405356 PLEKHD1A6NEE1 506 aa12.56□□□□□ -0.4
NOLC1-202ENST00000405356 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
NOLC1-202ENST00000405356 CUL7Q14999 1698 aa12.54□□□□□ -0.4
NOLC1-202ENST00000405356 WDR62O43379 1518 aa12.52□□□□□ -0.41
NOLC1-202ENST00000405356 MIER1Q8N108 512 aa12.48□□□□□ -0.41
NOLC1-202ENST00000405356 CCNB3Q8WWL7 1395 aa12.48□□□□□ -0.41
NOLC1-202ENST00000405356 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
NOLC1-202ENST00000405356 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
NOLC1-202ENST00000405356 GRIN2AQ12879 1464 aa12.47□□□□□ -0.41
NOLC1-202ENST00000405356 CFDP1Q9UEE9 299 aaPredicted RBP12.47□□□□□ -0.41
NOLC1-202ENST00000405356 SYNJ2O15056 1496 aa12.46□□□□□ -0.41
NOLC1-202ENST00000405356 MAGI1Q96QZ7 1491 aaPredicted RBP12.46□□□□□ -0.42
NOLC1-202ENST00000405356 PTPRGP23470 1445 aa12.45□□□□□ -0.42
NOLC1-202ENST00000405356 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
NOLC1-202ENST00000405356 EIF4G3O43432 1585 aaKnown RBP12.45□□□□□ -0.42
NOLC1-202ENST00000405356 TARBP1Q13395 1621 aaKnown RBP12.45□□□□□ -0.42
NOLC1-202ENST00000405356 KIAA0586Q9BVV6 1533 aa12.44□□□□□ -0.42
NOLC1-202ENST00000405356 IQGAP2Q13576 1575 aa12.44□□□□□ -0.42
NOLC1-202ENST00000405356 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
NOLC1-202ENST00000405356 EFCAB5A4FU69 1503 aa12.43□□□□□ -0.42
NOLC1-202ENST00000405356 PRG4Q92954 1404 aaPredicted RBP12.42□□□□□ -0.42
NOLC1-202ENST00000405356 CASKIN1Q8WXD9 1431 aa12.41□□□□□ -0.42
NOLC1-202ENST00000405356 PBRM1Q86U86 1689 aa12.4□□□□□ -0.42
NOLC1-202ENST00000405356 ADAMTS12P58397 1594 aa12.4□□□□□ -0.42
NOLC1-202ENST00000405356 TSPY4P0CV99 314 aa12.4□□□□□ -0.42
NOLC1-202ENST00000405356 TSPY10P0CW01 314 aa12.4□□□□□ -0.42
NOLC1-202ENST00000405356 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
NOLC1-202ENST00000405356 LRRC9Q6ZRR7 1453 aa12.37□□□□□ -0.43
NOLC1-202ENST00000405356 FYCO1Q9BQS8 1478 aa12.37□□□□□ -0.43
NOLC1-202ENST00000405356 PCF11O94913 1555 aaKnown RBP12.36□□□□□ -0.43
NOLC1-202ENST00000405356 CTTNBP2Q8WZ74 1663 aa12.35□□□□□ -0.43
NOLC1-202ENST00000405356 PHLDB1Q86UU1 1377 aa12.35□□□□□ -0.43
NOLC1-202ENST00000405356 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
NOLC1-202ENST00000405356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.34□□□□□ -0.437e-8■■■□□ 18.5
NOLC1-202ENST00000405356 CYB5RLQ6IPT4 315 aa12.33□□□□□ -0.44
NOLC1-202ENST00000405356 TIAM1Q13009 1591 aa12.32□□□□□ -0.44
NOLC1-202ENST00000405356 WDR97A6NE52 1622 aa12.32□□□□□ -0.44
NOLC1-202ENST00000405356 CDK13Q14004 1512 aaKnown RBP12.31□□□□□ -0.44
NOLC1-202ENST00000405356 ZNF326Q5BKZ1 582 aaKnown RBP12.3□□□□□ -0.44
NOLC1-202ENST00000405356 PLB1Q6P1J6 1458 aa12.3□□□□□ -0.44
NOLC1-202ENST00000405356 NCOA2Q15596 1464 aa12.28□□□□□ -0.44
NOLC1-202ENST00000405356 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
NOLC1-202ENST00000405356 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.45
NOLC1-202ENST00000405356 HECW1Q76N89 1606 aa12.27□□□□□ -0.45
NOLC1-202ENST00000405356 EPRSP07814 1512 aaKnown RBP12.27□□□□□ -0.45
NOLC1-202ENST00000405356 SETD5Q9C0A6 1442 aa12.27□□□□□ -0.45
NOLC1-202ENST00000405356 RAB3GAP2Q9H2M9 1393 aa12.26□□□□□ -0.45
NOLC1-202ENST00000405356 POLR3GLQ9BT43 218 aa12.26□□□□□ -0.45
NOLC1-202ENST00000405356 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
NOLC1-202ENST00000405356 FGD6Q6ZV73 1430 aa12.26□□□□□ -0.45
NOLC1-202ENST00000405356 MYOM3Q5VTT5 1437 aa12.25□□□□□ -0.45
NOLC1-202ENST00000405356 SIN3AQ96ST3 1273 aa12.24□□□□□ -0.45
NOLC1-202ENST00000405356 TONSLQ96HA7 1378 aa12.23□□□□□ -0.45
NOLC1-202ENST00000405356 BCANQ96GW7 911 aa12.23□□□□□ -0.45
NOLC1-202ENST00000405356 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
NOLC1-202ENST00000405356 NUP160Q12769 1436 aa12.23□□□□□ -0.45
NOLC1-202ENST00000405356 EFCAB2Q5VUJ9 269 aa12.23□□□□□ -0.45
NOLC1-202ENST00000405356 UGGT2Q9NYU1 1516 aa12.22□□□□□ -0.45
NOLC1-202ENST00000405356 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
NOLC1-202ENST00000405356 KIAA0556O60303 1618 aa12.21□□□□□ -0.46
NOLC1-202ENST00000405356 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.46
NOLC1-202ENST00000405356 UACAQ9BZF9 1416 aa12.21□□□□□ -0.46
NOLC1-202ENST00000405356 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
NOLC1-202ENST00000405356 DISP1Q96F81 1524 aa12.2□□□□□ -0.46
NOLC1-202ENST00000405356 TROQ12816 1431 aaPredicted RBP12.19□□□□□ -0.46
NOLC1-202ENST00000405356 FOXD1Q16676 465 aa12.19□□□□□ -0.46
NOLC1-202ENST00000405356 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
NOLC1-202ENST00000405356 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
NOLC1-202ENST00000405356 MAP3K1Q13233 1512 aa12.16□□□□□ -0.46
NOLC1-202ENST00000405356 SAMD9Q5K651 1589 aa12.16□□□□□ -0.46
NOLC1-202ENST00000405356 RAPGEF6Q8TEU7 1601 aa12.16□□□□□ -0.46
NOLC1-202ENST00000405356 NUP153P49790 1475 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms