RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 CCNB3Q8WWL7 1395 aa10.01□□□□□ -0.81
HDAC9-202ENST00000405010 FANCIQ9NVI1 1328 aa9.99□□□□□ -0.81
HDAC9-202ENST00000405010 KANK4Q5T7N3 995 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-202ENST00000405010 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.81
HDAC9-202ENST00000405010 ERICH6BQ5W0A0 696 aa9.96□□□□□ -0.81
HDAC9-202ENST00000405010 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.82
HDAC9-202ENST00000405010 BAZ1AQ9NRL2 1556 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-202ENST00000405010 LAS1LQ9Y4W2 734 aaKnown RBP9.95□□□□□ -0.82
HDAC9-202ENST00000405010 NEFMP07197 916 aa9.95□□□□□ -0.82
HDAC9-202ENST00000405010 RUSC2Q8N2Y8 1516 aa9.95□□□□□ -0.82
HDAC9-202ENST00000405010 WIZO95785 1651 aa9.94□□□□□ -0.82
HDAC9-202ENST00000405010 RAB3GAP2Q9H2M9 1393 aa9.94□□□□□ -0.82
HDAC9-202ENST00000405010 TMC1Q8TDI8 760 aa9.94□□□□□ -0.82
HDAC9-202ENST00000405010 SALL2Q9Y467 1007 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-202ENST00000405010 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
HDAC9-202ENST00000405010 PPM1GO15355 546 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-202ENST00000405010 SETD5Q9C0A6 1442 aa9.91□□□□□ -0.82
HDAC9-202ENST00000405010 GLIPR1L2Q4G1C9 344 aa9.91□□□□□ -0.82
HDAC9-202ENST00000405010 PPP1R15AO75807 674 aaPredicted RBP9.9□□□□□ -0.82
HDAC9-202ENST00000405010 CHIC2Q9UKJ5 165 aa9.9□□□□□ -0.83
HDAC9-202ENST00000405010 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-202ENST00000405010 DDRGK1Q96HY6 314 aa9.88□□□□□ -0.83
HDAC9-202ENST00000405010 IPO9Q96P70 1041 aaKnown RBP9.87□□□□□ -0.83
HDAC9-202ENST00000405010 NACADO15069 1562 aa9.87□□□□□ -0.83
HDAC9-202ENST00000405010 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
HDAC9-202ENST00000405010 MSH5O43196 834 aa9.86□□□□□ -0.83
HDAC9-202ENST00000405010 MTUS2Q5JR59 1369 aa9.85□□□□□ -0.83
HDAC9-202ENST00000405010 RAPGEF2Q9Y4G8 1499 aa9.85□□□□□ -0.83
HDAC9-202ENST00000405010 RRP7BPQ9NSQ0 103 aa9.85□□□□□ -0.83
HDAC9-202ENST00000405010 ARXQ96QS3 562 aa9.83□□□□□ -0.84
HDAC9-202ENST00000405010 HSPA5P11021 654 aaKnown RBP9.83□□□□□ -0.84
HDAC9-202ENST00000405010 KIF27Q86VH2 1401 aa9.82□□□□□ -0.84
HDAC9-202ENST00000405010 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
HDAC9-202ENST00000405010 TOP2AP11388 1531 aaKnown RBP9.82□□□□□ -0.84
HDAC9-202ENST00000405010 BAZ1BQ9UIG0 1483 aaKnown RBP9.81□□□□□ -0.84
HDAC9-202ENST00000405010 ANO8Q9HCE9 1232 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-202ENST00000405010 CANXP27824 592 aaKnown RBP9.8□□□□□ -0.84
HDAC9-202ENST00000405010 UPF2Q9HAU5 1272 aaKnown RBP9.77□□□□□ -0.85
HDAC9-202ENST00000405010 PAK3O75914 559 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-202ENST00000405010 TCERG1O14776 1098 aaKnown RBP9.76□□□□□ -0.85
HDAC9-202ENST00000405010 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-202ENST00000405010 SLC4A1APQ9BWU0 796 aaKnown RBP9.75□□□□□ -0.85
HDAC9-202ENST00000405010 NUDCQ9Y266 331 aa9.75□□□□□ -0.85
HDAC9-202ENST00000405010 USP35Q9P2H5 1018 aa9.75□□□□□ -0.85
HDAC9-202ENST00000405010 ZBED9Q6R2W3 1325 aa9.74□□□□□ -0.85
HDAC9-202ENST00000405010 FHAD1B1AJZ9 1412 aa9.74□□□□□ -0.85
HDAC9-202ENST00000405010 KIF21BO75037 1637 aa9.74□□□□□ -0.85
HDAC9-202ENST00000405010 IL27Q8NEV9 243 aa9.73□□□□□ -0.85
HDAC9-202ENST00000405010 PRKRIP1Q9H875 184 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-202ENST00000405010 ZNF777Q9ULD5 760 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-202ENST00000405010 BECN1Q14457 450 aa9.72□□□□□ -0.85
HDAC9-202ENST00000405010 KDM2AQ9Y2K7 1162 aa9.72□□□□□ -0.85
HDAC9-202ENST00000405010 NAP1L5Q96NT1 182 aaPredicted RBP9.71□□□□□ -0.85
HDAC9-202ENST00000405010 ARHGAP35Q9NRY4 1499 aa9.71□□□□□ -0.86
HDAC9-202ENST00000405010 RGS3P49796 1198 aa9.71□□□□□ -0.86
HDAC9-202ENST00000405010 SMARCA2P51531 1590 aa9.7□□□□□ -0.86
HDAC9-202ENST00000405010 RRBP1Q9P2E9 1410 aaKnown RBP9.7□□□□□ -0.86
HDAC9-202ENST00000405010 ANP32BQ92688 251 aaKnown RBP9.69□□□□□ -0.86
HDAC9-202ENST00000405010 RCAN3Q9UKA8 241 aa9.69□□□□□ -0.86
HDAC9-202ENST00000405010 PDE4AP27815 886 aa9.69□□□□□ -0.86
HDAC9-202ENST00000405010 WDR43Q15061 677 aaKnown RBP eCLIP9.68□□□□□ -0.86
HDAC9-202ENST00000405010 GSE1Q14687 1217 aa9.68□□□□□ -0.86
HDAC9-202ENST00000405010 CARMIL1Q5VZK9 1371 aa9.67□□□□□ -0.86
HDAC9-202ENST00000405010 HSP90AA1P07900 732 aaKnown RBP9.67□□□□□ -0.86
HDAC9-202ENST00000405010 L3MBTL2Q969R5 705 aa9.67□□□□□ -0.86
HDAC9-202ENST00000405010 WDR97A6NE52 1622 aa9.66□□□□□ -0.86
HDAC9-202ENST00000405010 FOXD1Q16676 465 aa9.66□□□□□ -0.86
HDAC9-202ENST00000405010 CARD11Q9BXL7 1154 aa9.66□□□□□ -0.86
HDAC9-202ENST00000405010 TRIM44Q96DX7 344 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-202ENST00000405010 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
HDAC9-202ENST00000405010 CUX2O14529 1486 aa9.64□□□□□ -0.87
HDAC9-202ENST00000405010 EXOC6Q8TAG9 804 aa9.64□□□□□ -0.87
HDAC9-202ENST00000405010 FMN1Q68DA7 1419 aa9.64□□□□□ -0.87
HDAC9-202ENST00000405010 SLC4A3P48751 1232 aa9.64□□□□□ -0.87
HDAC9-202ENST00000405010 WASHC2AQ641Q2 1341 aa9.64□□□□□ -0.87
HDAC9-202ENST00000405010 L1TD1Q5T7N2 865 aaKnown RBP9.63□□□□□ -0.87
HDAC9-202ENST00000405010 RSPH6AQ9H0K4 717 aa9.63□□□□□ -0.87
HDAC9-202ENST00000405010 MPHOSPH9Q99550 1183 aa9.63□□□□□ -0.87
HDAC9-202ENST00000405010 ARAP1Q96P48 1450 aa9.62□□□□□ -0.87
HDAC9-202ENST00000405010 BRPF3Q9ULD4 1205 aa9.62□□□□□ -0.87
HDAC9-202ENST00000405010 PHLDB1Q86UU1 1377 aa9.61□□□□□ -0.87
HDAC9-202ENST00000405010 CCDC184Q52MB2 194 aa9.61□□□□□ -0.87
HDAC9-202ENST00000405010 MS4A1P11836 297 aa9.61□□□□□ -0.87
HDAC9-202ENST00000405010 RRP1P56182 461 aaKnown RBP9.61□□□□□ -0.87
HDAC9-202ENST00000405010 PNNQ9H307 717 aaKnown RBP9.61□□□□□ -0.87
HDAC9-202ENST00000405010 CCDC18Q5T9S5 1454 aa9.6□□□□□ -0.87
HDAC9-202ENST00000405010 CNTLNQ9NXG0 1405 aa9.6□□□□□ -0.87
HDAC9-202ENST00000405010 SLKQ9H2G2 1235 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-202ENST00000405010 NFKBIBQ15653 356 aa9.58□□□□□ -0.88
HDAC9-202ENST00000405010 CCDC7Q96M83 1385 aa9.58□□□□□ -0.88
HDAC9-202ENST00000405010 CC2D1BQ5T0F9 858 aaKnown RBP9.58□□□□□ -0.88
HDAC9-202ENST00000405010 AKNAQ7Z591 1439 aa9.58□□□□□ -0.88
HDAC9-202ENST00000405010 PDE3BQ13370 1112 aa9.57□□□□□ -0.88
HDAC9-202ENST00000405010 SYNJ1O43426 1573 aa9.57□□□□□ -0.88
HDAC9-202ENST00000405010 RALBP1Q15311 655 aa9.57□□□□□ -0.88
HDAC9-202ENST00000405010 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
HDAC9-202ENST00000405010 PLIN1O60240 522 aa9.56□□□□□ -0.88
HDAC9-202ENST00000405010 RGL3Q3MIN7 710 aa9.56□□□□□ -0.88
HDAC9-202ENST00000405010 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
HDAC9-202ENST00000405010 FRAT1Q92837 279 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms