RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 GRIN2AQ12879 1464 aa40.1■■■■■ 4.01
HIST2H3A-201ENST00000403683 CTTNBP2Q8WZ74 1663 aa40.01■■■■■ 4
HIST2H3A-201ENST00000403683 CHD1O14646 1710 aa39.83■■■■□ 3.97
HIST2H3A-201ENST00000403683 KIAA0586Q9BVV6 1533 aa39.83■■■■□ 3.97
HIST2H3A-201ENST00000403683 IQGAP2Q13576 1575 aa39.83■■■■□ 3.97
HIST2H3A-201ENST00000403683 CEP170Q5SW79 1584 aa39.82■■■■□ 3.96
HIST2H3A-201ENST00000403683 NUP160Q12769 1436 aa39.8■■■■□ 3.96
HIST2H3A-201ENST00000403683 P3H3Q8IVL6 736 aa39.8■■■■□ 3.96
HIST2H3A-201ENST00000403683 ARHGAP35Q9NRY4 1499 aa39.79■■■■□ 3.96
HIST2H3A-201ENST00000403683 EFCAB5A4FU69 1503 aa39.69■■■■□ 3.94
HIST2H3A-201ENST00000403683 ARAP1Q96P48 1450 aa39.68■■■■□ 3.94
HIST2H3A-201ENST00000403683 VPS8Q8N3P4 1428 aa39.63■■■■□ 3.93
HIST2H3A-201ENST00000403683 JPH4Q96JJ6 628 aa39.63■■■■□ 3.93
HIST2H3A-201ENST00000403683 FHOD3Q2V2M9 1422 aa39.6■■■■□ 3.93
HIST2H3A-201ENST00000403683 UGGT2Q9NYU1 1516 aa39.59■■■■□ 3.93
HIST2H3A-201ENST00000403683 SAMD9Q5K651 1589 aa39.55■■■■□ 3.92
HIST2H3A-201ENST00000403683 APLP2Q06481 763 aa39.47■■■■□ 3.91
HIST2H3A-201ENST00000403683 CARMIL2Q6F5E8 1435 aa39.45■■■■□ 3.91
HIST2H3A-201ENST00000403683 OSCARQ8IYS5 282 aa39.45■■■■□ 3.91
HIST2H3A-201ENST00000403683 TTBK1Q5TCY1 1321 aaPredicted RBP39.44■■■■□ 3.9
HIST2H3A-201ENST00000403683 DISP1Q96F81 1524 aa39.43■■■■□ 3.9
HIST2H3A-201ENST00000403683 ATP1B4Q9UN42 357 aaPredicted RBP39.41■■■■□ 3.9
HIST2H3A-201ENST00000403683 FMN1Q68DA7 1419 aa39.41■■■■□ 3.9
HIST2H3A-201ENST00000403683 KIAA0556O60303 1618 aa39.39■■■■□ 3.9
HIST2H3A-201ENST00000403683 PRG4Q92954 1404 aaPredicted RBP39.38■■■■□ 3.89
HIST2H3A-201ENST00000403683 CLASP1Q7Z460 1538 aa39.36■■■■□ 3.89
HIST2H3A-201ENST00000403683 PPARGC1BQ86YN6 1023 aaKnown RBP39.36■■■■□ 3.89
HIST2H3A-201ENST00000403683 SHROOM2Q13796 1616 aa39.26■■■■□ 3.87
HIST2H3A-201ENST00000403683 CASKIN1Q8WXD9 1431 aa39.22■■■■□ 3.87
HIST2H3A-201ENST00000403683 PCF11O94913 1555 aaKnown RBP39.22■■■■□ 3.87
HIST2H3A-201ENST00000403683 FYCO1Q9BQS8 1478 aa39.18■■■■□ 3.86
HIST2H3A-201ENST00000403683 PTPRGP23470 1445 aa39.11■■■■□ 3.85
HIST2H3A-201ENST00000403683 ERCC6L2Q5T890 1561 aa39.08■■■■□ 3.85
HIST2H3A-201ENST00000403683 ARID3CA6NKF2 412 aa39■■■■□ 3.83
HIST2H3A-201ENST00000403683 HECW1Q76N89 1606 aa38.99■■■■□ 3.83
HIST2H3A-201ENST00000403683 KANK4Q5T7N3 995 aaPredicted RBP38.99■■■■□ 3.83
HIST2H3A-201ENST00000403683 PLB1Q6P1J6 1458 aa38.99■■■■□ 3.83
HIST2H3A-201ENST00000403683 RAPGEF6Q8TEU7 1601 aa38.97■■■■□ 3.83
HIST2H3A-201ENST00000403683 TIAM1Q13009 1591 aa38.97■■■■□ 3.83
HIST2H3A-201ENST00000403683 MAP3K1Q13233 1512 aa38.96■■■■□ 3.83
HIST2H3A-201ENST00000403683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.92■■■■□ 3.82
HIST2H3A-201ENST00000403683 HNRNPUL2Q1KMD3 747 aaKnown RBP38.92■■■■□ 3.82
HIST2H3A-201ENST00000403683 CCDC18Q5T9S5 1454 aa38.9■■■■□ 3.82
HIST2H3A-201ENST00000403683 TRIM26Q12899 539 aaPredicted RBP38.87■■■■□ 3.81
HIST2H3A-201ENST00000403683 EPRSP07814 1512 aaKnown RBP38.87■■■■□ 3.81
HIST2H3A-201ENST00000403683 CFAP43Q8NDM7 1665 aa38.87■■■■□ 3.81
HIST2H3A-201ENST00000403683 NUP153P49790 1475 aaKnown RBP38.86■■■■□ 3.81
HIST2H3A-201ENST00000403683 ABCA8O94911 1581 aa38.85■■■■□ 3.81
HIST2H3A-201ENST00000403683 UACAQ9BZF9 1416 aa38.83■■■■□ 3.81
HIST2H3A-201ENST00000403683 LRRC9Q6ZRR7 1453 aa38.83■■■■□ 3.81
HIST2H3A-201ENST00000403683 LRRIQ1Q96JM4 1722 aa38.82■■■■□ 3.81
HIST2H3A-201ENST00000403683 MTUS2Q5JR59 1369 aa38.81■■■■□ 3.8
HIST2H3A-201ENST00000403683 CDK13Q14004 1512 aaKnown RBP38.8■■■■□ 3.8
HIST2H3A-201ENST00000403683 PCGF6Q9BYE7 350 aa38.75■■■■□ 3.79
HIST2H3A-201ENST00000403683 CDK11AQ9UQ88 783 aaPredicted RBP38.75■■■■□ 3.79
HIST2H3A-201ENST00000403683 ABCC2Q92887 1545 aa38.67■■■■□ 3.78
HIST2H3A-201ENST00000403683 ARHGEF11O15085 1522 aa38.66■■■■□ 3.78
HIST2H3A-201ENST00000403683 ATP10BO94823 1461 aa38.64■■■■□ 3.78
HIST2H3A-201ENST00000403683 EHBP1L1Q8N3D4 1523 aa38.61■■■■□ 3.77
HIST2H3A-201ENST00000403683 PLEKHD1A6NEE1 506 aa38.59■■■■□ 3.77
HIST2H3A-201ENST00000403683 UHRF1BP1LA0JNW5 1464 aa38.59■■■■□ 3.77
HIST2H3A-201ENST00000403683 MAGI3Q5TCQ9 1506 aa38.57■■■■□ 3.77
HIST2H3A-201ENST00000403683 RIMBP3CA6NJZ7 1639 aa38.49■■■■□ 3.75
HIST2H3A-201ENST00000403683 RIMBP3BA6NNM3 1639 aa38.49■■■■□ 3.75
HIST2H3A-201ENST00000403683 RIMBP3Q9UFD9 1639 aa38.49■■■■□ 3.75
HIST2H3A-201ENST00000403683 SUPT6HQ7KZ85 1726 aaKnown RBP38.48■■■■□ 3.75
HIST2H3A-201ENST00000403683 TROQ12816 1431 aaPredicted RBP38.48■■■■□ 3.75
HIST2H3A-201ENST00000403683 CYB5RLQ6IPT4 315 aa38.47■■■■□ 3.75
HIST2H3A-201ENST00000403683 NCOA2Q15596 1464 aa38.47■■■■□ 3.75
HIST2H3A-201ENST00000403683 PHLDB1Q86UU1 1377 aa38.46■■■■□ 3.75
HIST2H3A-201ENST00000403683 ADCY10Q96PN6 1610 aa38.46■■■■□ 3.75
HIST2H3A-201ENST00000403683 NPM1P06748 294 aaKnown RBP eCLIP38.44■■■■□ 3.74
HIST2H3A-201ENST00000403683 KDM5BQ9UGL1 1544 aa38.43■■■■□ 3.74
HIST2H3A-201ENST00000403683 ZCCHC11Q5TAX3 1644 aaKnown RBP38.39■■■■□ 3.74
HIST2H3A-201ENST00000403683 CCNB3Q8WWL7 1395 aa38.33■■■■□ 3.73
HIST2H3A-201ENST00000403683 RRBP1Q9P2E9 1410 aaKnown RBP38.31■■■■□ 3.72
HIST2H3A-201ENST00000403683 KCNH8Q96L42 1107 aa38.3■■■■□ 3.72
HIST2H3A-201ENST00000403683 FAM50AQ14320 339 aaKnown RBP38.29■■■■□ 3.72
HIST2H3A-201ENST00000403683 MYOM3Q5VTT5 1437 aa38.28■■■■□ 3.72
HIST2H3A-201ENST00000403683 KIF14Q15058 1648 aa38.27■■■■□ 3.72
HIST2H3A-201ENST00000403683 FGD6Q6ZV73 1430 aa38.23■■■■□ 3.71
HIST2H3A-201ENST00000403683 ITGAEP38570 1179 aa38.17■■■■□ 3.7
HIST2H3A-201ENST00000403683 ASXL2Q76L83 1435 aa38.14■■■■□ 3.7
HIST2H3A-201ENST00000403683 WDR7Q9Y4E6 1490 aa38.14■■■■□ 3.7
HIST2H3A-201ENST00000403683 CFDP1Q9UEE9 299 aaPredicted RBP38.12■■■■□ 3.69
HIST2H3A-201ENST00000403683 MIA2Q96PC5 1412 aa38.1■■■■□ 3.69
HIST2H3A-201ENST00000403683 ABCC10Q5T3U5 1492 aa38.1■■■■□ 3.69
HIST2H3A-201ENST00000403683 GPATCH8Q9UKJ3 1502 aaKnown RBP38.08■■■■□ 3.69
HIST2H3A-201ENST00000403683 ZNF777Q9ULD5 760 aaPredicted RBP38.05■■■■□ 3.68
HIST2H3A-201ENST00000403683 PTPN23Q9H3S7 1636 aa38.04■■■■□ 3.68
HIST2H3A-201ENST00000403683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.04■■■■□ 3.68
HIST2H3A-201ENST00000403683 ITSN2Q9NZM3 1697 aa38.03■■■■□ 3.68
HIST2H3A-201ENST00000403683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.03■■■■□ 3.68
HIST2H3A-201ENST00000403683 TTC37Q6PGP7 1564 aa37.98■■■■□ 3.67
HIST2H3A-201ENST00000403683 ZNF644Q9H582 1327 aaPredicted RBP37.96■■■■□ 3.67
HIST2H3A-201ENST00000403683 CDC42BPAQ5VT25 1732 aa37.95■■■■□ 3.67
HIST2H3A-201ENST00000403683 TCOF1Q13428 1488 aaKnown RBP37.95■■■■□ 3.67
HIST2H3A-201ENST00000403683 MAPKBP1O60336 1514 aa37.89■■■■□ 3.66
HIST2H3A-201ENST00000403683 DNAJC5Q9H3Z4 198 aa37.88■■■■□ 3.66
HIST2H3A-201ENST00000403683 ARHGAP5Q13017 1502 aa37.87■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms