RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 ERCC6Q03468 1493 aa19.47■□□□□ 0.71
PRAME-203ENST00000402697 ARHGAP35Q9NRY4 1499 aa19.47■□□□□ 0.71
PRAME-203ENST00000402697 CTTNBP2Q8WZ74 1663 aa19.46■□□□□ 0.71
PRAME-203ENST00000402697 RRBP1Q9P2E9 1410 aaKnown RBP19.43■□□□□ 0.7
PRAME-203ENST00000402697 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
PRAME-203ENST00000402697 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
PRAME-203ENST00000402697 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.69
PRAME-203ENST00000402697 ZNF316A6NFI3 1004 aaPredicted RBP19.37■□□□□ 0.69
PRAME-203ENST00000402697 AQRO60306 1485 aaKnown RBP eCLIP19.36■□□□□ 0.692e-41■■■■■ 46.3
PRAME-203ENST00000402697 ADAMTS12P58397 1594 aa19.36■□□□□ 0.69
PRAME-203ENST00000402697 FHAD1B1AJZ9 1412 aa19.35■□□□□ 0.69
PRAME-203ENST00000402697 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
PRAME-203ENST00000402697 EIF4G3O43432 1585 aaKnown RBP19.33■□□□□ 0.68
PRAME-203ENST00000402697 GRIN2BQ13224 1484 aa19.32■□□□□ 0.68
PRAME-203ENST00000402697 EFCAB5A4FU69 1503 aa19.31■□□□□ 0.68
PRAME-203ENST00000402697 TIAM1Q13009 1591 aa19.3■□□□□ 0.68
PRAME-203ENST00000402697 KANK4Q5T7N3 995 aaPredicted RBP19.3■□□□□ 0.68
PRAME-203ENST00000402697 CCNB3Q8WWL7 1395 aa19.29■□□□□ 0.68
PRAME-203ENST00000402697 SAMD9Q5K651 1589 aa19.25■□□□□ 0.67
PRAME-203ENST00000402697 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
PRAME-203ENST00000402697 CFAP43Q8NDM7 1665 aa19.22■□□□□ 0.67
PRAME-203ENST00000402697 LRRC9Q6ZRR7 1453 aa19.21■□□□□ 0.67
PRAME-203ENST00000402697 PCF11O94913 1555 aaKnown RBP19.21■□□□□ 0.67
PRAME-203ENST00000402697 CENPBP07199 599 aaPredicted RBP19.21■□□□□ 0.67
PRAME-203ENST00000402697 SNAPC4Q5SXM2 1469 aa19.2■□□□□ 0.66
PRAME-203ENST00000402697 FHOD3Q2V2M9 1422 aa19.19■□□□□ 0.66
PRAME-203ENST00000402697 FYCO1Q9BQS8 1478 aa19.19■□□□□ 0.66
PRAME-203ENST00000402697 P3H3Q8IVL6 736 aa19.18■□□□□ 0.66
PRAME-203ENST00000402697 IQGAP2Q13576 1575 aa19.17■□□□□ 0.66
PRAME-203ENST00000402697 CASKIN1Q8WXD9 1431 aa19.15■□□□□ 0.66
PRAME-203ENST00000402697 MAGI1Q96QZ7 1491 aaPredicted RBP19.15■□□□□ 0.66
PRAME-203ENST00000402697 ACIN1Q9UKV3 1341 aaKnown RBP19.15■□□□□ 0.66
PRAME-203ENST00000402697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.14■□□□□ 0.663e-13■■■■■ 30.1
PRAME-203ENST00000402697 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
PRAME-203ENST00000402697 GRIN2AQ12879 1464 aa19.12■□□□□ 0.65
PRAME-203ENST00000402697 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
PRAME-203ENST00000402697 SYNJ2O15056 1496 aa19.07■□□□□ 0.64
PRAME-203ENST00000402697 LRRIQ1Q96JM4 1722 aa19.06■□□□□ 0.64
PRAME-203ENST00000402697 UGGT2Q9NYU1 1516 aa19.06■□□□□ 0.64
PRAME-203ENST00000402697 SETD5Q9C0A6 1442 aa19.04■□□□□ 0.64
PRAME-203ENST00000402697 KIAA0586Q9BVV6 1533 aa19.04■□□□□ 0.64
PRAME-203ENST00000402697 CEP170Q5SW79 1584 aa19.03■□□□□ 0.64
PRAME-203ENST00000402697 PHLDB1Q86UU1 1377 aa19.02■□□□□ 0.64
PRAME-203ENST00000402697 RAB3GAP2Q9H2M9 1393 aa19.01■□□□□ 0.63
PRAME-203ENST00000402697 KIAA0556O60303 1618 aa18.99■□□□□ 0.63
PRAME-203ENST00000402697 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
PRAME-203ENST00000402697 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
PRAME-203ENST00000402697 PELP1Q8IZL8 1130 aaKnown RBP18.97■□□□□ 0.63
PRAME-203ENST00000402697 TIMELESSQ9UNS1 1208 aa18.97■□□□□ 0.63
PRAME-203ENST00000402697 NUP160Q12769 1436 aa18.96■□□□□ 0.63
PRAME-203ENST00000402697 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
PRAME-203ENST00000402697 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
PRAME-203ENST00000402697 HECW1Q76N89 1606 aa18.92■□□□□ 0.62
PRAME-203ENST00000402697 MAPKBP1O60336 1514 aa18.92■□□□□ 0.62
PRAME-203ENST00000402697 MIER1Q8N108 512 aa18.89■□□□□ 0.62
PRAME-203ENST00000402697 CHD1O14646 1710 aa18.89■□□□□ 0.62
PRAME-203ENST00000402697 FGD6Q6ZV73 1430 aa18.89■□□□□ 0.61
PRAME-203ENST00000402697 CCDC18Q5T9S5 1454 aa18.89■□□□□ 0.61
PRAME-203ENST00000402697 EHBP1L1Q8N3D4 1523 aa18.88■□□□□ 0.61
PRAME-203ENST00000402697 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
PRAME-203ENST00000402697 ITGAEP38570 1179 aa18.88■□□□□ 0.61
PRAME-203ENST00000402697 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
PRAME-203ENST00000402697 FBLN2P98095 1184 aa18.86■□□□□ 0.61
PRAME-203ENST00000402697 SUPT6HQ7KZ85 1726 aaKnown RBP18.86■□□□□ 0.61
PRAME-203ENST00000402697 MAGI3Q5TCQ9 1506 aa18.83■□□□□ 0.61
PRAME-203ENST00000402697 EPRSP07814 1512 aaKnown RBP18.83■□□□□ 0.6
PRAME-203ENST00000402697 MYOM3Q5VTT5 1437 aa18.82■□□□□ 0.6
PRAME-203ENST00000402697 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
PRAME-203ENST00000402697 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
PRAME-203ENST00000402697 CDK13Q14004 1512 aaKnown RBP18.8■□□□□ 0.6
PRAME-203ENST00000402697 HFM1A2PYH4 1435 aa18.8■□□□□ 0.6
PRAME-203ENST00000402697 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
PRAME-203ENST00000402697 GTF3C3Q9Y5Q9 886 aa18.79■□□□□ 0.6
PRAME-203ENST00000402697 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.59
PRAME-203ENST00000402697 CARMIL2Q6F5E8 1435 aa18.75■□□□□ 0.59
PRAME-203ENST00000402697 JPH4Q96JJ6 628 aa18.75■□□□□ 0.59
PRAME-203ENST00000402697 TCOF1Q13428 1488 aaKnown RBP18.74■□□□□ 0.59
PRAME-203ENST00000402697 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
PRAME-203ENST00000402697 SHROOM2Q13796 1616 aa18.73■□□□□ 0.59
PRAME-203ENST00000402697 AKNAQ7Z591 1439 aa18.73■□□□□ 0.59
PRAME-203ENST00000402697 PTPN23Q9H3S7 1636 aa18.72■□□□□ 0.59
PRAME-203ENST00000402697 MIA2Q96PC5 1412 aa18.71■□□□□ 0.59
PRAME-203ENST00000402697 PLB1Q6P1J6 1458 aa18.71■□□□□ 0.59
PRAME-203ENST00000402697 ABCA8O94911 1581 aa18.68■□□□□ 0.58
PRAME-203ENST00000402697 NAIPQ13075 1403 aa18.67■□□□□ 0.58
PRAME-203ENST00000402697 ARID3CA6NKF2 412 aa18.66■□□□□ 0.58
PRAME-203ENST00000402697 PRG4Q92954 1404 aaPredicted RBP18.65■□□□□ 0.58
PRAME-203ENST00000402697 YTHDC1Q96MU7 727 aaKnown RBP18.64■□□□□ 0.57
PRAME-203ENST00000402697 GCC2Q8IWJ2 1684 aa18.64■□□□□ 0.57
PRAME-203ENST00000402697 PTPRKQ15262 1439 aa18.64■□□□□ 0.57
PRAME-203ENST00000402697 PPP1R15AO75807 674 aaPredicted RBP18.64■□□□□ 0.57
PRAME-203ENST00000402697 CLASP1Q7Z460 1538 aa18.63■□□□□ 0.57
PRAME-203ENST00000402697 ADCY10Q96PN6 1610 aa18.6■□□□□ 0.57
PRAME-203ENST00000402697 SIN3AQ96ST3 1273 aa18.6■□□□□ 0.57
PRAME-203ENST00000402697 TONSLQ96HA7 1378 aa18.58■□□□□ 0.56
PRAME-203ENST00000402697 ERCC6L2Q5T890 1561 aa18.58■□□□□ 0.56
PRAME-203ENST00000402697 TROQ12816 1431 aaPredicted RBP18.56■□□□□ 0.56
PRAME-203ENST00000402697 CDK11AQ9UQ88 783 aaPredicted RBP18.55■□□□□ 0.56
PRAME-203ENST00000402697 KIF14Q15058 1648 aa18.55■□□□□ 0.56
PRAME-203ENST00000402697 ROCK1Q13464 1354 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms