RNA–Protein interactions for RNA: ENST00000401068.1

RSPO1-202, Transcript of R-spondin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO1, Length 2,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1-202ENST00000401068 VPS8Q8N3P4 1428 aa23.63■■□□□ 1.37
RSPO1-202ENST00000401068 RANGAP1P46060 587 aaPredicted RBP23.62■■□□□ 1.37
RSPO1-202ENST00000401068 CHMP7Q8WUX9 453 aaPredicted RBP23.61■■□□□ 1.37
RSPO1-202ENST00000401068 EFCAB5A4FU69 1503 aa23.61■■□□□ 1.37
RSPO1-202ENST00000401068 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
RSPO1-202ENST00000401068 KIAA0586Q9BVV6 1533 aa23.57■■□□□ 1.36
RSPO1-202ENST00000401068 IQGAP2Q13576 1575 aa23.56■■□□□ 1.36
RSPO1-202ENST00000401068 NUP160Q12769 1436 aa23.54■■□□□ 1.36
RSPO1-202ENST00000401068 SAMD9Q5K651 1589 aa23.52■■□□□ 1.35
RSPO1-202ENST00000401068 FBLN2P98095 1184 aa23.5■■□□□ 1.35
RSPO1-202ENST00000401068 CEP170Q5SW79 1584 aa23.49■■□□□ 1.35
RSPO1-202ENST00000401068 UGGT2Q9NYU1 1516 aa23.48■■□□□ 1.35
RSPO1-202ENST00000401068 CHD1O14646 1710 aa23.41■■□□□ 1.34
RSPO1-202ENST00000401068 FHOD3Q2V2M9 1422 aa23.41■■□□□ 1.34
RSPO1-202ENST00000401068 FMN1Q68DA7 1419 aa23.39■■□□□ 1.34
RSPO1-202ENST00000401068 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
RSPO1-202ENST00000401068 APLP2Q06481 763 aa23.37■■□□□ 1.33
RSPO1-202ENST00000401068 DISP1Q96F81 1524 aa23.33■■□□□ 1.33
RSPO1-202ENST00000401068 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
RSPO1-202ENST00000401068 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
RSPO1-202ENST00000401068 KIAA0556O60303 1618 aa23.32■■□□□ 1.32
RSPO1-202ENST00000401068 CASKIN1Q8WXD9 1431 aa23.32■■□□□ 1.32
RSPO1-202ENST00000401068 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
RSPO1-202ENST00000401068 FYCO1Q9BQS8 1478 aa23.31■■□□□ 1.32
RSPO1-202ENST00000401068 PCF11O94913 1555 aaKnown RBP23.28■■□□□ 1.32
RSPO1-202ENST00000401068 CARMIL2Q6F5E8 1435 aa23.27■■□□□ 1.32
RSPO1-202ENST00000401068 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
RSPO1-202ENST00000401068 SHROOM2Q13796 1616 aa23.22■■□□□ 1.31
RSPO1-202ENST00000401068 CLASP1Q7Z460 1538 aa23.21■■□□□ 1.31
RSPO1-202ENST00000401068 TIAM1Q13009 1591 aa23.21■■□□□ 1.31
RSPO1-202ENST00000401068 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
RSPO1-202ENST00000401068 CFAP43Q8NDM7 1665 aa23.17■■□□□ 1.3
RSPO1-202ENST00000401068 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
RSPO1-202ENST00000401068 HECW1Q76N89 1606 aa23.13■■□□□ 1.29
RSPO1-202ENST00000401068 KANK4Q5T7N3 995 aaPredicted RBP23.13■■□□□ 1.29
RSPO1-202ENST00000401068 ATP1B4Q9UN42 357 aaPredicted RBP23.11■■□□□ 1.29
RSPO1-202ENST00000401068 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
RSPO1-202ENST00000401068 LRRC9Q6ZRR7 1453 aa23.11■■□□□ 1.29
RSPO1-202ENST00000401068 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.28
RSPO1-202ENST00000401068 RAPGEF6Q8TEU7 1601 aa23.07■■□□□ 1.28
RSPO1-202ENST00000401068 LRRIQ1Q96JM4 1722 aa23.06■■□□□ 1.28
RSPO1-202ENST00000401068 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
RSPO1-202ENST00000401068 EPRSP07814 1512 aaKnown RBP23.04■■□□□ 1.28
RSPO1-202ENST00000401068 PTPRGP23470 1445 aa23.03■■□□□ 1.28
RSPO1-202ENST00000401068 NUP153P49790 1475 aaKnown RBP23.02■■□□□ 1.28
RSPO1-202ENST00000401068 ABCA8O94911 1581 aa23.01■■□□□ 1.27
RSPO1-202ENST00000401068 PLB1Q6P1J6 1458 aa23■■□□□ 1.27
RSPO1-202ENST00000401068 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
RSPO1-202ENST00000401068 MTUS2Q5JR59 1369 aa22.96■■□□□ 1.27
RSPO1-202ENST00000401068 EHBP1L1Q8N3D4 1523 aa22.95■■□□□ 1.26
RSPO1-202ENST00000401068 CDK13Q14004 1512 aaKnown RBP22.93■■□□□ 1.26
RSPO1-202ENST00000401068 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
RSPO1-202ENST00000401068 UACAQ9BZF9 1416 aa22.9■■□□□ 1.26
RSPO1-202ENST00000401068 CDK11AQ9UQ88 783 aaPredicted RBP22.9■■□□□ 1.26
RSPO1-202ENST00000401068 MAGI3Q5TCQ9 1506 aa22.89■■□□□ 1.25
RSPO1-202ENST00000401068 SUPT6HQ7KZ85 1726 aaKnown RBP22.87■■□□□ 1.25
RSPO1-202ENST00000401068 PHLDB1Q86UU1 1377 aa22.86■■□□□ 1.25
RSPO1-202ENST00000401068 ARHGEF11O15085 1522 aa22.84■■□□□ 1.25
RSPO1-202ENST00000401068 ABCC2Q92887 1545 aa22.84■■□□□ 1.25
RSPO1-202ENST00000401068 ATP10BO94823 1461 aa22.84■■□□□ 1.25
RSPO1-202ENST00000401068 UHRF1BP1LA0JNW5 1464 aa22.83■■□□□ 1.25
RSPO1-202ENST00000401068 NCOA2Q15596 1464 aa22.83■■□□□ 1.25
RSPO1-202ENST00000401068 CCNB3Q8WWL7 1395 aa22.83■■□□□ 1.25
RSPO1-202ENST00000401068 ARID3CA6NKF2 412 aa22.81■■□□□ 1.24
RSPO1-202ENST00000401068 HRCP23327 699 aa22.81■■□□□ 1.24
RSPO1-202ENST00000401068 TROQ12816 1431 aaPredicted RBP22.8■■□□□ 1.24
RSPO1-202ENST00000401068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.8■■□□□ 1.24
RSPO1-202ENST00000401068 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
RSPO1-202ENST00000401068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.23
RSPO1-202ENST00000401068 MYOM3Q5VTT5 1437 aa22.76■■□□□ 1.23
RSPO1-202ENST00000401068 PLEKHD1A6NEE1 506 aa22.74■■□□□ 1.23
RSPO1-202ENST00000401068 FGD6Q6ZV73 1430 aa22.74■■□□□ 1.23
RSPO1-202ENST00000401068 ADCY10Q96PN6 1610 aa22.74■■□□□ 1.23
RSPO1-202ENST00000401068 KDM5BQ9UGL1 1544 aa22.72■■□□□ 1.23
RSPO1-202ENST00000401068 MIA2Q96PC5 1412 aa22.68■■□□□ 1.22
RSPO1-202ENST00000401068 KIF14Q15058 1648 aa22.65■■□□□ 1.22
RSPO1-202ENST00000401068 ZCCHC11Q5TAX3 1644 aaKnown RBP22.65■■□□□ 1.22
RSPO1-202ENST00000401068 TCOF1Q13428 1488 aaKnown RBP22.63■■□□□ 1.21
RSPO1-202ENST00000401068 FAM50AQ14320 339 aaKnown RBP22.62■■□□□ 1.21
RSPO1-202ENST00000401068 PTPN23Q9H3S7 1636 aa22.61■■□□□ 1.21
RSPO1-202ENST00000401068 ABCC10Q5T3U5 1492 aa22.61■■□□□ 1.21
RSPO1-202ENST00000401068 ITSN2Q9NZM3 1697 aa22.59■■□□□ 1.21
RSPO1-202ENST00000401068 GPATCH8Q9UKJ3 1502 aaKnown RBP22.58■■□□□ 1.2
RSPO1-202ENST00000401068 RIMBP3CA6NJZ7 1639 aa22.52■■□□□ 1.2
RSPO1-202ENST00000401068 RIMBP3BA6NNM3 1639 aa22.52■■□□□ 1.2
RSPO1-202ENST00000401068 RIMBP3Q9UFD9 1639 aa22.52■■□□□ 1.2
RSPO1-202ENST00000401068 CFDP1Q9UEE9 299 aaPredicted RBP22.51■■□□□ 1.19
RSPO1-202ENST00000401068 CDC42BPAQ5VT25 1732 aa22.5■■□□□ 1.19
RSPO1-202ENST00000401068 ITGAEP38570 1179 aa22.49■■□□□ 1.19
RSPO1-202ENST00000401068 WDR7Q9Y4E6 1490 aa22.49■■□□□ 1.19
RSPO1-202ENST00000401068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.48■■□□□ 1.19
RSPO1-202ENST00000401068 NPM1P06748 294 aaKnown RBP eCLIP22.48■■□□□ 1.19
RSPO1-202ENST00000401068 PREX2Q70Z35 1606 aa22.45■■□□□ 1.18
RSPO1-202ENST00000401068 TTC37Q6PGP7 1564 aa22.45■■□□□ 1.18
RSPO1-202ENST00000401068 CAMSAP2Q08AD1 1489 aa22.44■■□□□ 1.18
RSPO1-202ENST00000401068 ASXL2Q76L83 1435 aa22.44■■□□□ 1.18
RSPO1-202ENST00000401068 PTPRKQ15262 1439 aa22.43■■□□□ 1.18
RSPO1-202ENST00000401068 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
RSPO1-202ENST00000401068 DNMT1P26358 1616 aaKnown RBP22.41■■□□□ 1.18
RSPO1-202ENST00000401068 ZNF644Q9H582 1327 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms