RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
CDC42-203ENST00000400259 RRBP1Q9P2E9 1410 aaKnown RBP23.79■■□□□ 1.4
CDC42-203ENST00000400259 CFAP43Q8NDM7 1665 aa23.79■■□□□ 1.4
CDC42-203ENST00000400259 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
CDC42-203ENST00000400259 PBRM1Q86U86 1689 aa23.77■■□□□ 1.4
CDC42-203ENST00000400259 PCF11O94913 1555 aaKnown RBP23.75■■□□□ 1.39
CDC42-203ENST00000400259 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
CDC42-203ENST00000400259 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.391e-6■■■■□ 23.9
CDC42-203ENST00000400259 SAMD9Q5K651 1589 aa23.7■■□□□ 1.38
CDC42-203ENST00000400259 WDR62O43379 1518 aa23.7■■□□□ 1.38
CDC42-203ENST00000400259 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
CDC42-203ENST00000400259 LRRC9Q6ZRR7 1453 aa23.67■■□□□ 1.38
CDC42-203ENST00000400259 FHOD3Q2V2M9 1422 aa23.66■■□□□ 1.38
CDC42-203ENST00000400259 CASKIN1Q8WXD9 1431 aa23.64■■□□□ 1.38
CDC42-203ENST00000400259 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
CDC42-203ENST00000400259 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
CDC42-203ENST00000400259 FMN1Q68DA7 1419 aa23.61■■□□□ 1.37
CDC42-203ENST00000400259 IFT140Q96RY7 1462 aa23.61■■□□□ 1.37
CDC42-203ENST00000400259 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
CDC42-203ENST00000400259 GRIN2BQ13224 1484 aa23.57■■□□□ 1.36
CDC42-203ENST00000400259 P3H3Q8IVL6 736 aa23.56■■□□□ 1.36
CDC42-203ENST00000400259 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
CDC42-203ENST00000400259 LRRIQ1Q96JM4 1722 aa23.51■■□□□ 1.35
CDC42-203ENST00000400259 IQGAP2Q13576 1575 aa23.5■■□□□ 1.35
CDC42-203ENST00000400259 CLSPNQ9HAW4 1339 aa23.49■■□□□ 1.35
CDC42-203ENST00000400259 PHLDB1Q86UU1 1377 aa23.47■■□□□ 1.35
CDC42-203ENST00000400259 ZNF608Q9ULD9 1512 aaPredicted RBP23.47■■□□□ 1.35
CDC42-203ENST00000400259 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
CDC42-203ENST00000400259 PELP1Q8IZL8 1130 aaKnown RBP23.44■■□□□ 1.34
CDC42-203ENST00000400259 DHX57Q6P158 1386 aaKnown RBP23.44■■□□□ 1.34
CDC42-203ENST00000400259 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
CDC42-203ENST00000400259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.39■■□□□ 1.348e-13■■□□□ 13.2
CDC42-203ENST00000400259 UGGT2Q9NYU1 1516 aa23.39■■□□□ 1.34
CDC42-203ENST00000400259 ATP1B4Q9UN42 357 aaPredicted RBP23.36■■□□□ 1.33
CDC42-203ENST00000400259 HECW1Q76N89 1606 aa23.34■■□□□ 1.33
CDC42-203ENST00000400259 CCDC18Q5T9S5 1454 aa23.34■■□□□ 1.33
CDC42-203ENST00000400259 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.33
CDC42-203ENST00000400259 SUPT6HQ7KZ85 1726 aaKnown RBP23.32■■□□□ 1.32
CDC42-203ENST00000400259 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
CDC42-203ENST00000400259 KIAA0586Q9BVV6 1533 aa23.32■■□□□ 1.32
CDC42-203ENST00000400259 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
CDC42-203ENST00000400259 MTUS2Q5JR59 1369 aa23.29■■□□□ 1.32
CDC42-203ENST00000400259 FGD6Q6ZV73 1430 aa23.28■■□□□ 1.32
CDC42-203ENST00000400259 SETD5Q9C0A6 1442 aa23.27■■□□□ 1.32
CDC42-203ENST00000400259 RAB3GAP2Q9H2M9 1393 aa23.27■■□□□ 1.32
CDC42-203ENST00000400259 ARHGEF11O15085 1522 aa23.26■■□□□ 1.31
CDC42-203ENST00000400259 ZNF316A6NFI3 1004 aaPredicted RBP23.26■■□□□ 1.31
CDC42-203ENST00000400259 KIAA0556O60303 1618 aa23.26■■□□□ 1.31
CDC42-203ENST00000400259 NCOA2Q15596 1464 aa23.24■■□□□ 1.31
CDC42-203ENST00000400259 ITGAEP38570 1179 aa23.24■■□□□ 1.31
CDC42-203ENST00000400259 MAGI3Q5TCQ9 1506 aa23.22■■□□□ 1.31
CDC42-203ENST00000400259 FAM50AQ14320 339 aaKnown RBP23.22■■□□□ 1.31
CDC42-203ENST00000400259 DISP1Q96F81 1524 aa23.22■■□□□ 1.31
CDC42-203ENST00000400259 SYNJ2O15056 1496 aa23.21■■□□□ 1.31
CDC42-203ENST00000400259 EPRSP07814 1512 aaKnown RBP23.21■■□□□ 1.31
CDC42-203ENST00000400259 DIEXFQ68CQ4 756 aaKnown RBP23.21■■□□□ 1.31
CDC42-203ENST00000400259 MYOM3Q5VTT5 1437 aa23.2■■□□□ 1.3
CDC42-203ENST00000400259 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
CDC42-203ENST00000400259 CEP170Q5SW79 1584 aa23.17■■□□□ 1.3
CDC42-203ENST00000400259 PTPN23Q9H3S7 1636 aa23.14■■□□□ 1.29
CDC42-203ENST00000400259 RAPGEF6Q8TEU7 1601 aa23.12■■□□□ 1.29
CDC42-203ENST00000400259 NUP160Q12769 1436 aa23.11■■□□□ 1.29
CDC42-203ENST00000400259 CDK13Q14004 1512 aaKnown RBP23.11■■□□□ 1.29
CDC42-203ENST00000400259 TCOF1Q13428 1488 aaKnown RBP23.1■■□□□ 1.29
CDC42-203ENST00000400259 HFM1A2PYH4 1435 aa23.06■■□□□ 1.28
CDC42-203ENST00000400259 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
CDC42-203ENST00000400259 NUP153P49790 1475 aaKnown RBP23.05■■□□□ 1.28
CDC42-203ENST00000400259 PTPRKQ15262 1439 aa23.05■■□□□ 1.28
CDC42-203ENST00000400259 MIA2Q96PC5 1412 aa23.03■■□□□ 1.28
CDC42-203ENST00000400259 GCC2Q8IWJ2 1684 aa22.99■■□□□ 1.27
CDC42-203ENST00000400259 NAIPQ13075 1403 aa22.97■■□□□ 1.27
CDC42-203ENST00000400259 CARMIL2Q6F5E8 1435 aa22.96■■□□□ 1.27
CDC42-203ENST00000400259 AKNAQ7Z591 1439 aa22.95■■□□□ 1.26
CDC42-203ENST00000400259 SCAF1Q9H7N4 1312 aaKnown RBP22.95■■□□□ 1.26
CDC42-203ENST00000400259 UACAQ9BZF9 1416 aa22.93■■□□□ 1.26
CDC42-203ENST00000400259 ADCY10Q96PN6 1610 aa22.92■■□□□ 1.26
CDC42-203ENST00000400259 JPH4Q96JJ6 628 aa22.89■■□□□ 1.26
CDC42-203ENST00000400259 TIMELESSQ9UNS1 1208 aa22.89■■□□□ 1.26
CDC42-203ENST00000400259 FBLN2P98095 1184 aa22.89■■□□□ 1.25
CDC42-203ENST00000400259 PLB1Q6P1J6 1458 aa22.89■■□□□ 1.25
CDC42-203ENST00000400259 ABCA8O94911 1581 aa22.88■■□□□ 1.25
CDC42-203ENST00000400259 ITSN2Q9NZM3 1697 aa22.87■■□□□ 1.25
CDC42-203ENST00000400259 MYT1Q01538 1121 aa22.87■■□□□ 1.25
CDC42-203ENST00000400259 TROQ12816 1431 aaPredicted RBP22.87■■□□□ 1.25
CDC42-203ENST00000400259 CDK11AQ9UQ88 783 aaPredicted RBP22.87■■□□□ 1.25
CDC42-203ENST00000400259 CHD1O14646 1710 aa22.86■■□□□ 1.25
CDC42-203ENST00000400259 DNMT1P26358 1616 aaKnown RBP22.86■■□□□ 1.25
CDC42-203ENST00000400259 ARID3CA6NKF2 412 aa22.82■■□□□ 1.24
CDC42-203ENST00000400259 NEUROD1Q13562 356 aa22.8■■□□□ 1.24
CDC42-203ENST00000400259 SIN3AQ96ST3 1273 aa22.79■■□□□ 1.24
CDC42-203ENST00000400259 PRG4Q92954 1404 aaPredicted RBP22.79■■□□□ 1.24
CDC42-203ENST00000400259 KIF14Q15058 1648 aa22.78■■□□□ 1.24
CDC42-203ENST00000400259 DAPK1P53355 1430 aa22.78■■□□□ 1.24
CDC42-203ENST00000400259 ROCK1Q13464 1354 aa22.78■■□□□ 1.24
CDC42-203ENST00000400259 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
CDC42-203ENST00000400259 ACIN1Q9UKV3 1341 aaKnown RBP22.76■■□□□ 1.23
CDC42-203ENST00000400259 KDM6BO15054 1643 aa22.76■■□□□ 1.23
CDC42-203ENST00000400259 MIER1Q8N108 512 aa22.74■■□□□ 1.23
CDC42-203ENST00000400259 ABCC5O15440 1437 aa22.74■■□□□ 1.23
CDC42-203ENST00000400259 GPATCH8Q9UKJ3 1502 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms