RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 ARAP1Q96P48 1450 aa26.79■■□□□ 1.88
CSNK2A1-203ENST00000400217 SYNJ2O15056 1496 aa26.78■■□□□ 1.88
CSNK2A1-203ENST00000400217 GRIN2AQ12879 1464 aa26.76■■□□□ 1.87
CSNK2A1-203ENST00000400217 CHMP7Q8WUX9 453 aaPredicted RBP26.75■■□□□ 1.87
CSNK2A1-203ENST00000400217 EFCAB5A4FU69 1503 aa26.69■■□□□ 1.86
CSNK2A1-203ENST00000400217 FBLN2P98095 1184 aa26.68■■□□□ 1.86
CSNK2A1-203ENST00000400217 IQGAP2Q13576 1575 aa26.65■■□□□ 1.86
CSNK2A1-203ENST00000400217 KIAA0586Q9BVV6 1533 aa26.64■■□□□ 1.85
CSNK2A1-203ENST00000400217 P3H3Q8IVL6 736 aa26.62■■□□□ 1.85
CSNK2A1-203ENST00000400217 PPARGC1BQ86YN6 1023 aaKnown RBP26.62■■□□□ 1.85
CSNK2A1-203ENST00000400217 SAMD9Q5K651 1589 aa26.59■■□□□ 1.85
CSNK2A1-203ENST00000400217 TRIM26Q12899 539 aaPredicted RBP26.59■■□□□ 1.85
CSNK2A1-203ENST00000400217 APLP2Q06481 763 aa26.58■■□□□ 1.85
CSNK2A1-203ENST00000400217 CEP170Q5SW79 1584 aa26.58■■□□□ 1.85
CSNK2A1-203ENST00000400217 NUP160Q12769 1436 aa26.57■■□□□ 1.84
CSNK2A1-203ENST00000400217 FHOD3Q2V2M9 1422 aa26.57■■□□□ 1.84
CSNK2A1-203ENST00000400217 UGGT2Q9NYU1 1516 aa26.54■■□□□ 1.84
CSNK2A1-203ENST00000400217 PCGF6Q9BYE7 350 aa26.52■■□□□ 1.84
CSNK2A1-203ENST00000400217 CHD1O14646 1710 aa26.48■■□□□ 1.83
CSNK2A1-203ENST00000400217 FMN1Q68DA7 1419 aa26.47■■□□□ 1.83
CSNK2A1-203ENST00000400217 JPH4Q96JJ6 628 aa26.42■■□□□ 1.82
CSNK2A1-203ENST00000400217 TTBK1Q5TCY1 1321 aaPredicted RBP26.41■■□□□ 1.82
CSNK2A1-203ENST00000400217 CASKIN1Q8WXD9 1431 aa26.4■■□□□ 1.82
CSNK2A1-203ENST00000400217 DISP1Q96F81 1524 aa26.4■■□□□ 1.82
CSNK2A1-203ENST00000400217 PCF11O94913 1555 aaKnown RBP26.39■■□□□ 1.82
CSNK2A1-203ENST00000400217 FYCO1Q9BQS8 1478 aa26.38■■□□□ 1.81
CSNK2A1-203ENST00000400217 KIAA0556O60303 1618 aa26.37■■□□□ 1.81
CSNK2A1-203ENST00000400217 MAP3K1Q13233 1512 aa26.36■■□□□ 1.81
CSNK2A1-203ENST00000400217 ATP1B4Q9UN42 357 aaPredicted RBP26.34■■□□□ 1.81
CSNK2A1-203ENST00000400217 KANK4Q5T7N3 995 aaPredicted RBP26.32■■□□□ 1.8
CSNK2A1-203ENST00000400217 CARMIL2Q6F5E8 1435 aa26.32■■□□□ 1.8
CSNK2A1-203ENST00000400217 TIAM1Q13009 1591 aa26.3■■□□□ 1.8
CSNK2A1-203ENST00000400217 CFAP43Q8NDM7 1665 aa26.23■■□□□ 1.79
CSNK2A1-203ENST00000400217 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
CSNK2A1-203ENST00000400217 LRRC9Q6ZRR7 1453 aa26.2■■□□□ 1.79
CSNK2A1-203ENST00000400217 SHROOM2Q13796 1616 aa26.2■■□□□ 1.78
CSNK2A1-203ENST00000400217 CLASP1Q7Z460 1538 aa26.19■■□□□ 1.78
CSNK2A1-203ENST00000400217 HECW1Q76N89 1606 aa26.18■■□□□ 1.78
CSNK2A1-203ENST00000400217 LRRIQ1Q96JM4 1722 aa26.14■■□□□ 1.78
CSNK2A1-203ENST00000400217 CCDC18Q5T9S5 1454 aa26.14■■□□□ 1.77
CSNK2A1-203ENST00000400217 RAPGEF6Q8TEU7 1601 aa26.11■■□□□ 1.77
CSNK2A1-203ENST00000400217 EPRSP07814 1512 aaKnown RBP26.1■■□□□ 1.77
CSNK2A1-203ENST00000400217 PTPRGP23470 1445 aa26.07■■□□□ 1.76
CSNK2A1-203ENST00000400217 PLB1Q6P1J6 1458 aa26.06■■□□□ 1.76
CSNK2A1-203ENST00000400217 MTUS2Q5JR59 1369 aa26.06■■□□□ 1.76
CSNK2A1-203ENST00000400217 NUP153P49790 1475 aaKnown RBP26.05■■□□□ 1.76
CSNK2A1-203ENST00000400217 OSCARQ8IYS5 282 aa26.04■■□□□ 1.76
CSNK2A1-203ENST00000400217 CDK13Q14004 1512 aaKnown RBP26.02■■□□□ 1.76
CSNK2A1-203ENST00000400217 ABCA8O94911 1581 aa26.01■■□□□ 1.75
CSNK2A1-203ENST00000400217 ERCC6L2Q5T890 1561 aa26.01■■□□□ 1.75
CSNK2A1-203ENST00000400217 ARID3CA6NKF2 412 aa25.99■■□□□ 1.75
CSNK2A1-203ENST00000400217 EHBP1L1Q8N3D4 1523 aa25.99■■□□□ 1.75
CSNK2A1-203ENST00000400217 RRBP1Q9P2E9 1410 aaKnown RBP25.99■■□□□ 1.75
CSNK2A1-203ENST00000400217 PHLDB1Q86UU1 1377 aa25.95■■□□□ 1.75
CSNK2A1-203ENST00000400217 MAGI3Q5TCQ9 1506 aa25.95■■□□□ 1.75
CSNK2A1-203ENST00000400217 CDK11AQ9UQ88 783 aaPredicted RBP25.93■■□□□ 1.74
CSNK2A1-203ENST00000400217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.92■■□□□ 1.74
CSNK2A1-203ENST00000400217 HNRNPUL2Q1KMD3 747 aaKnown RBP25.92■■□□□ 1.74
CSNK2A1-203ENST00000400217 CCNB3Q8WWL7 1395 aa25.91■■□□□ 1.74
CSNK2A1-203ENST00000400217 UACAQ9BZF9 1416 aa25.91■■□□□ 1.74
CSNK2A1-203ENST00000400217 SUPT6HQ7KZ85 1726 aaKnown RBP25.91■■□□□ 1.74
CSNK2A1-203ENST00000400217 NCOA2Q15596 1464 aa25.89■■□□□ 1.74
CSNK2A1-203ENST00000400217 ATP10BO94823 1461 aa25.86■■□□□ 1.73
CSNK2A1-203ENST00000400217 ARHGEF11O15085 1522 aa25.84■■□□□ 1.73
CSNK2A1-203ENST00000400217 TROQ12816 1431 aaPredicted RBP25.81■■□□□ 1.72
CSNK2A1-203ENST00000400217 ABCC2Q92887 1545 aa25.81■■□□□ 1.72
CSNK2A1-203ENST00000400217 MYOM3Q5VTT5 1437 aa25.79■■□□□ 1.72
CSNK2A1-203ENST00000400217 PLEKHD1A6NEE1 506 aa25.79■■□□□ 1.72
CSNK2A1-203ENST00000400217 FGD6Q6ZV73 1430 aa25.78■■□□□ 1.72
CSNK2A1-203ENST00000400217 UHRF1BP1LA0JNW5 1464 aa25.77■■□□□ 1.72
CSNK2A1-203ENST00000400217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.76■■□□□ 1.71
CSNK2A1-203ENST00000400217 FAM50AQ14320 339 aaKnown RBP25.76■■□□□ 1.71
CSNK2A1-203ENST00000400217 ADCY10Q96PN6 1610 aa25.7■■□□□ 1.7
CSNK2A1-203ENST00000400217 HRCP23327 699 aa25.67■■□□□ 1.7
CSNK2A1-203ENST00000400217 ITGAEP38570 1179 aa25.67■■□□□ 1.7
CSNK2A1-203ENST00000400217 MIA2Q96PC5 1412 aa25.67■■□□□ 1.7
CSNK2A1-203ENST00000400217 KDM5BQ9UGL1 1544 aa25.66■■□□□ 1.7
CSNK2A1-203ENST00000400217 KIF14Q15058 1648 aa25.65■■□□□ 1.7
CSNK2A1-203ENST00000400217 PTPN23Q9H3S7 1636 aa25.64■■□□□ 1.7
CSNK2A1-203ENST00000400217 TCOF1Q13428 1488 aaKnown RBP25.62■■□□□ 1.69
CSNK2A1-203ENST00000400217 ZCCHC11Q5TAX3 1644 aaKnown RBP25.62■■□□□ 1.69
CSNK2A1-203ENST00000400217 ABCC10Q5T3U5 1492 aa25.58■■□□□ 1.69
CSNK2A1-203ENST00000400217 GPATCH8Q9UKJ3 1502 aaKnown RBP25.58■■□□□ 1.68
CSNK2A1-203ENST00000400217 ITSN2Q9NZM3 1697 aa25.56■■□□□ 1.68
CSNK2A1-203ENST00000400217 CCER1Q8TC90 406 aaPredicted RBP25.54■■□□□ 1.68
CSNK2A1-203ENST00000400217 CFDP1Q9UEE9 299 aaPredicted RBP25.53■■□□□ 1.68
CSNK2A1-203ENST00000400217 CDC42BPAQ5VT25 1732 aa25.49■■□□□ 1.67
CSNK2A1-203ENST00000400217 ZEB1P37275 1124 aaPredicted RBP25.48■■□□□ 1.67
CSNK2A1-203ENST00000400217 PTPRKQ15262 1439 aa25.48■■□□□ 1.67
CSNK2A1-203ENST00000400217 KCNH8Q96L42 1107 aa25.47■■□□□ 1.67
CSNK2A1-203ENST00000400217 ZNF644Q9H582 1327 aaPredicted RBP25.47■■□□□ 1.67
CSNK2A1-203ENST00000400217 SETD5Q9C0A6 1442 aa25.46■■□□□ 1.67
CSNK2A1-203ENST00000400217 NPM1P06748 294 aaKnown RBP eCLIP25.46■■□□□ 1.67
CSNK2A1-203ENST00000400217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.45■■□□□ 1.66
CSNK2A1-203ENST00000400217 CAMSAP2Q08AD1 1489 aa25.43■■□□□ 1.66
CSNK2A1-203ENST00000400217 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
CSNK2A1-203ENST00000400217 RIMBP3CA6NJZ7 1639 aa25.42■■□□□ 1.66
CSNK2A1-203ENST00000400217 RIMBP3BA6NNM3 1639 aa25.42■■□□□ 1.66
CSNK2A1-203ENST00000400217 RIMBP3Q9UFD9 1639 aa25.42■■□□□ 1.66
CSNK2A1-203ENST00000400217 WDR7Q9Y4E6 1490 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms