RNA–Protein interactions for RNA: ENST00000400188.7

GABRB3-203, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 1,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-203ENST00000400188 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
GABRB3-203ENST00000400188 KIAA0586Q9BVV6 1533 aa15.93■□□□□ 0.14
GABRB3-203ENST00000400188 ERCC6L2Q5T890 1561 aa15.93■□□□□ 0.14
GABRB3-203ENST00000400188 JPH4Q96JJ6 628 aa15.92■□□□□ 0.14
GABRB3-203ENST00000400188 RIMBP3CA6NJZ7 1639 aa15.91■□□□□ 0.14
GABRB3-203ENST00000400188 RIMBP3BA6NNM3 1639 aa15.91■□□□□ 0.14
GABRB3-203ENST00000400188 KIF21BO75037 1637 aa15.91■□□□□ 0.14
GABRB3-203ENST00000400188 RIMBP3Q9UFD9 1639 aa15.91■□□□□ 0.14
GABRB3-203ENST00000400188 SHROOM2Q13796 1616 aa15.89■□□□□ 0.13
GABRB3-203ENST00000400188 IQGAP2Q13576 1575 aa15.88■□□□□ 0.13
GABRB3-203ENST00000400188 PRG4Q92954 1404 aaPredicted RBP15.87■□□□□ 0.13
GABRB3-203ENST00000400188 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
GABRB3-203ENST00000400188 RANGAP1P46060 587 aaPredicted RBP15.85■□□□□ 0.13
GABRB3-203ENST00000400188 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
GABRB3-203ENST00000400188 UBTFP17480 764 aaKnown RBP15.84■□□□□ 0.13
GABRB3-203ENST00000400188 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
GABRB3-203ENST00000400188 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
GABRB3-203ENST00000400188 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
GABRB3-203ENST00000400188 DISP1Q96F81 1524 aa15.8■□□□□ 0.12
GABRB3-203ENST00000400188 TTBK1Q5TCY1 1321 aaPredicted RBP15.79■□□□□ 0.12
GABRB3-203ENST00000400188 UGGT2Q9NYU1 1516 aa15.79■□□□□ 0.12
GABRB3-203ENST00000400188 P3H3Q8IVL6 736 aa15.76■□□□□ 0.11
GABRB3-203ENST00000400188 KIAA0556O60303 1618 aa15.74■□□□□ 0.11
GABRB3-203ENST00000400188 CARMIL2Q6F5E8 1435 aa15.73■□□□□ 0.11
GABRB3-203ENST00000400188 TNIKQ9UKE5 1360 aa15.69■□□□□ 0.1
GABRB3-203ENST00000400188 SAMD9Q5K651 1589 aa15.69■□□□□ 0.1
GABRB3-203ENST00000400188 PTPRGP23470 1445 aa15.69■□□□□ 0.1
GABRB3-203ENST00000400188 FHOD3Q2V2M9 1422 aa15.67■□□□□ 0.1
GABRB3-203ENST00000400188 ARHGAP35Q9NRY4 1499 aa15.65■□□□□ 0.1
GABRB3-203ENST00000400188 PLB1Q6P1J6 1458 aa15.62■□□□□ 0.09
GABRB3-203ENST00000400188 ADCY10Q96PN6 1610 aa15.62■□□□□ 0.09
GABRB3-203ENST00000400188 EFCAB5A4FU69 1503 aa15.61■□□□□ 0.09
GABRB3-203ENST00000400188 CLIP1P30622 1438 aa15.6■□□□□ 0.09
GABRB3-203ENST00000400188 CEP162Q5TB80 1403 aa15.59■□□□□ 0.09
GABRB3-203ENST00000400188 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
GABRB3-203ENST00000400188 ARID3CA6NKF2 412 aa15.57■□□□□ 0.08
GABRB3-203ENST00000400188 ABCA8O94911 1581 aa15.55■□□□□ 0.08
GABRB3-203ENST00000400188 ABCC2Q92887 1545 aa15.54■□□□□ 0.08
GABRB3-203ENST00000400188 UHRF1BP1LA0JNW5 1464 aa15.52■□□□□ 0.08
GABRB3-203ENST00000400188 RAPGEF6Q8TEU7 1601 aa15.5■□□□□ 0.07
GABRB3-203ENST00000400188 NUP153P49790 1475 aaKnown RBP15.49■□□□□ 0.07
GABRB3-203ENST00000400188 FMN1Q68DA7 1419 aa15.48■□□□□ 0.07
GABRB3-203ENST00000400188 KDM5BQ9UGL1 1544 aa15.48■□□□□ 0.07
GABRB3-203ENST00000400188 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
GABRB3-203ENST00000400188 ATP1B4Q9UN42 357 aaPredicted RBP15.47■□□□□ 0.07
GABRB3-203ENST00000400188 ZCCHC11Q5TAX3 1644 aaKnown RBP15.47■□□□□ 0.07
GABRB3-203ENST00000400188 ATP10BO94823 1461 aa15.45■□□□□ 0.06
GABRB3-203ENST00000400188 PCF11O94913 1555 aaKnown RBP15.45■□□□□ 0.06
GABRB3-203ENST00000400188 CDK13Q14004 1512 aaKnown RBP15.43■□□□□ 0.06
GABRB3-203ENST00000400188 ASXL2Q76L83 1435 aa15.43■□□□□ 0.06
GABRB3-203ENST00000400188 MAPKBP1O60336 1514 aa15.42■□□□□ 0.06
GABRB3-203ENST00000400188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-203ENST00000400188 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
GABRB3-203ENST00000400188 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
GABRB3-203ENST00000400188 LRRIQ1Q96JM4 1722 aa15.41■□□□□ 0.06
GABRB3-203ENST00000400188 CASKIN1Q8WXD9 1431 aa15.4■□□□□ 0.06
GABRB3-203ENST00000400188 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
GABRB3-203ENST00000400188 EPRSP07814 1512 aaKnown RBP15.38■□□□□ 0.05
GABRB3-203ENST00000400188 FYCO1Q9BQS8 1478 aa15.37■□□□□ 0.05
GABRB3-203ENST00000400188 VPS8Q8N3P4 1428 aa15.36■□□□□ 0.05
GABRB3-203ENST00000400188 KCNH8Q96L42 1107 aa15.36■□□□□ 0.05
GABRB3-203ENST00000400188 WDR7Q9Y4E6 1490 aa15.35■□□□□ 0.05
GABRB3-203ENST00000400188 FAM69CQ0P6D2 419 aa15.35■□□□□ 0.05
GABRB3-203ENST00000400188 ABCC10Q5T3U5 1492 aa15.34■□□□□ 0.05
GABRB3-203ENST00000400188 DIP2BQ9P265 1576 aa15.34■□□□□ 0.05
GABRB3-203ENST00000400188 KIF13AQ9H1H9 1805 aa15.33■□□□□ 0.05
GABRB3-203ENST00000400188 MAGI3Q5TCQ9 1506 aa15.31■□□□□ 0.04
GABRB3-203ENST00000400188 PLEKHD1A6NEE1 506 aa15.3■□□□□ 0.04
GABRB3-203ENST00000400188 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
GABRB3-203ENST00000400188 KIF14Q15058 1648 aa15.24■□□□□ 0.03
GABRB3-203ENST00000400188 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
GABRB3-203ENST00000400188 GLI2P10070 1586 aa15.24■□□□□ 0.03
GABRB3-203ENST00000400188 TSPOAP1O95153 1857 aa15.24■□□□□ 0.03
GABRB3-203ENST00000400188 TROQ12816 1431 aaPredicted RBP15.24■□□□□ 0.03
GABRB3-203ENST00000400188 CDK11AQ9UQ88 783 aaPredicted RBP15.23■□□□□ 0.03
GABRB3-203ENST00000400188 TIAM1Q13009 1591 aa15.22■□□□□ 0.03
GABRB3-203ENST00000400188 KANK4Q5T7N3 995 aaPredicted RBP15.22■□□□□ 0.03
GABRB3-203ENST00000400188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.22■□□□□ 0.03
GABRB3-203ENST00000400188 TTC37Q6PGP7 1564 aa15.22■□□□□ 0.03
GABRB3-203ENST00000400188 MAP3K4Q9Y6R4 1608 aa15.22■□□□□ 0.03
GABRB3-203ENST00000400188 CFAP43Q8NDM7 1665 aa15.21■□□□□ 0.03
GABRB3-203ENST00000400188 PPRC1Q5VV67 1664 aaKnown RBP15.2■□□□□ 0.02
GABRB3-203ENST00000400188 CD109Q6YHK3 1445 aa15.2■□□□□ 0.02
GABRB3-203ENST00000400188 ABCA9Q8IUA7 1624 aa15.2■□□□□ 0.02
GABRB3-203ENST00000400188 MTUS2Q5JR59 1369 aa15.19■□□□□ 0.02
GABRB3-203ENST00000400188 LRRC9Q6ZRR7 1453 aa15.16■□□□□ 0.02
GABRB3-203ENST00000400188 PPARGC1BQ86YN6 1023 aaKnown RBP15.15■□□□□ 0.02
GABRB3-203ENST00000400188 EHBP1L1Q8N3D4 1523 aa15.15■□□□□ 0.02
GABRB3-203ENST00000400188 APLP2Q06481 763 aa15.14■□□□□ 0.01
GABRB3-203ENST00000400188 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
GABRB3-203ENST00000400188 PLCH2O75038 1416 aa15.1■□□□□ 0.01
GABRB3-203ENST00000400188 NCOA2Q15596 1464 aa15.1■□□□□ 0.01
GABRB3-203ENST00000400188 COL17A1Q9UMD9 1497 aaPredicted RBP15.1■□□□□ 0.01
GABRB3-203ENST00000400188 GPATCH8Q9UKJ3 1502 aaKnown RBP15.08■□□□□ 0.01
GABRB3-203ENST00000400188 MYO5CQ9NQX4 1742 aa15.08■□□□□ 0.01
GABRB3-203ENST00000400188 FANCAO15360 1455 aa15.08■□□□□ 0
GABRB3-203ENST00000400188 TEX14Q8IWB6 1497 aa15.08■□□□□ 0
GABRB3-203ENST00000400188 CDC42BPAQ5VT25 1732 aa15.08■□□□□ 0
GABRB3-203ENST00000400188 SUPT6HQ7KZ85 1726 aaKnown RBP15.07■□□□□ 0
GABRB3-203ENST00000400188 CDC42BPBQ9Y5S2 1711 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms