RNA–Protein interactions for RNA: ENST00000399759.7

TRPV1-203, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-203ENST00000399759 KANK4Q5T7N3 995 aaPredicted RBP13.26□□□□□ -0.29
TRPV1-203ENST00000399759 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
TRPV1-203ENST00000399759 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
TRPV1-203ENST00000399759 CFDP1Q9UEE9 299 aaPredicted RBP13.24□□□□□ -0.29
TRPV1-203ENST00000399759 RAPGEF2Q9Y4G8 1499 aa13.24□□□□□ -0.29
TRPV1-203ENST00000399759 CLSPNQ9HAW4 1339 aa13.22□□□□□ -0.29
TRPV1-203ENST00000399759 EIF4G1Q04637 1599 aaKnown RBP13.22□□□□□ -0.29
TRPV1-203ENST00000399759 NCAPD3P42695 1498 aa13.21□□□□□ -0.29
TRPV1-203ENST00000399759 HIRIP3Q9BW71 556 aaPredicted RBP13.21□□□□□ -0.29
TRPV1-203ENST00000399759 CHGAP10645 457 aaKnown RBP13.19□□□□□ -0.3
TRPV1-203ENST00000399759 MIER1Q8N108 512 aa13.18□□□□□ -0.3
TRPV1-203ENST00000399759 FANCD2Q9BXW9 1451 aa13.18□□□□□ -0.3
TRPV1-203ENST00000399759 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
TRPV1-203ENST00000399759 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
TRPV1-203ENST00000399759 SIN3AQ96ST3 1273 aa13.15□□□□□ -0.3
TRPV1-203ENST00000399759 EIF4G2P78344 907 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRPV1-203ENST00000399759 FMN1Q68DA7 1419 aa13.12□□□□□ -0.31
TRPV1-203ENST00000399759 ESF1Q9H501 851 aaKnown RBP13.11□□□□□ -0.31
TRPV1-203ENST00000399759 FHOD3Q2V2M9 1422 aa13.1□□□□□ -0.31
TRPV1-203ENST00000399759 HNRNPUQ00839 825 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRPV1-203ENST00000399759 IGF1RP08069 1367 aa13.09□□□□□ -0.31
TRPV1-203ENST00000399759 ARHGAP35Q9NRY4 1499 aa13.08□□□□□ -0.32
TRPV1-203ENST00000399759 FAM9BQ8IZU0 186 aa13.08□□□□□ -0.32
TRPV1-203ENST00000399759 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
TRPV1-203ENST00000399759 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
TRPV1-203ENST00000399759 RGL3Q3MIN7 710 aa13.06□□□□□ -0.32
TRPV1-203ENST00000399759 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
TRPV1-203ENST00000399759 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
TRPV1-203ENST00000399759 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
TRPV1-203ENST00000399759 ANP32EQ9BTT0 268 aa13.04□□□□□ -0.32
TRPV1-203ENST00000399759 CFTRP13569 1480 aa13.03□□□□□ -0.32
TRPV1-203ENST00000399759 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
TRPV1-203ENST00000399759 RAD54L2Q9Y4B4 1467 aa13.02□□□□□ -0.32
TRPV1-203ENST00000399759 FKBP8Q14318 412 aa13.02□□□□□ -0.32
TRPV1-203ENST00000399759 TMC1Q8TDI8 760 aa13.02□□□□□ -0.33
TRPV1-203ENST00000399759 MRS2Q9HD23 443 aa13.02□□□□□ -0.33
TRPV1-203ENST00000399759 RAB3GAP2Q9H2M9 1393 aa13.01□□□□□ -0.33
TRPV1-203ENST00000399759 JPH4Q96JJ6 628 aa13□□□□□ -0.33
TRPV1-203ENST00000399759 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
TRPV1-203ENST00000399759 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
TRPV1-203ENST00000399759 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
TRPV1-203ENST00000399759 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
TRPV1-203ENST00000399759 SALL2Q9Y467 1007 aaPredicted RBP12.97□□□□□ -0.33
TRPV1-203ENST00000399759 HMGXB3Q12766 1538 aa12.96□□□□□ -0.33
TRPV1-203ENST00000399759 NEFMP07197 916 aa12.95□□□□□ -0.34
TRPV1-203ENST00000399759 CARD11Q9BXL7 1154 aa12.95□□□□□ -0.34
TRPV1-203ENST00000399759 CANXP27824 592 aaKnown RBP12.93□□□□□ -0.34
TRPV1-203ENST00000399759 NESP48681 1621 aa12.93□□□□□ -0.34
TRPV1-203ENST00000399759 FOXD1Q16676 465 aa12.93□□□□□ -0.34
TRPV1-203ENST00000399759 BCL11AQ9H165 835 aa12.92□□□□□ -0.34
TRPV1-203ENST00000399759 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
TRPV1-203ENST00000399759 PKD2Q13563 968 aa12.9□□□□□ -0.34
TRPV1-203ENST00000399759 MPHOSPH9Q99550 1183 aa12.9□□□□□ -0.34
TRPV1-203ENST00000399759 SENP3Q9H4L4 574 aaPredicted RBP12.9□□□□□ -0.34
TRPV1-203ENST00000399759 KIF21BO75037 1637 aa12.9□□□□□ -0.35
TRPV1-203ENST00000399759 UNC13AQ9UPW8 1703 aa12.89□□□□□ -0.35
TRPV1-203ENST00000399759 DCAF11Q8TEB1 546 aa12.88□□□□□ -0.35
TRPV1-203ENST00000399759 AQRO60306 1485 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■■■□□ 17.3
TRPV1-203ENST00000399759 CUX1P39880 1505 aa12.88□□□□□ -0.35
TRPV1-203ENST00000399759 CCDC18Q5T9S5 1454 aa12.87□□□□□ -0.35
TRPV1-203ENST00000399759 EFCAB2Q5VUJ9 269 aa12.87□□□□□ -0.35
TRPV1-203ENST00000399759 PRXQ9BXM0 1461 aa12.87□□□□□ -0.35
TRPV1-203ENST00000399759 TOP2BQ02880 1626 aa12.87□□□□□ -0.35
TRPV1-203ENST00000399759 WDR43Q15061 677 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRPV1-203ENST00000399759 DHX57Q6P158 1386 aaKnown RBP12.86□□□□□ -0.35
TRPV1-203ENST00000399759 PPP1R15AO75807 674 aaPredicted RBP12.85□□□□□ -0.35
TRPV1-203ENST00000399759 ANKRD30AQ9BXX3 1397 aa12.85□□□□□ -0.35
TRPV1-203ENST00000399759 ERICH3Q5RHP9 1530 aa12.85□□□□□ -0.35
TRPV1-203ENST00000399759 HNRNPMP52272 730 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRPV1-203ENST00000399759 NUP155O75694 1391 aa12.84□□□□□ -0.35
TRPV1-203ENST00000399759 ARAP1Q96P48 1450 aa12.84□□□□□ -0.35
TRPV1-203ENST00000399759 ANP32AP39687 249 aaKnown RBP12.83□□□□□ -0.35
TRPV1-203ENST00000399759 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
TRPV1-203ENST00000399759 SUPT16HQ9Y5B9 1047 aaKnown RBP12.83□□□□□ -0.36
TRPV1-203ENST00000399759 TOPBP1Q92547 1522 aa12.82□□□□□ -0.36
TRPV1-203ENST00000399759 HSPA5P11021 654 aaKnown RBP12.82□□□□□ -0.36
TRPV1-203ENST00000399759 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
TRPV1-203ENST00000399759 PTPRGP23470 1445 aa12.81□□□□□ -0.36
TRPV1-203ENST00000399759 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
TRPV1-203ENST00000399759 DNAJC5BQ9UF47 199 aa12.81□□□□□ -0.36
TRPV1-203ENST00000399759 IRX6P78412 446 aaPredicted RBP12.8□□□□□ -0.36
TRPV1-203ENST00000399759 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
TRPV1-203ENST00000399759 SENP3-EIF4A1A0A087X0R7 540 aa12.79□□□□□ -0.36
TRPV1-203ENST00000399759 L3MBTL2Q969R5 705 aa12.79□□□□□ -0.36
TRPV1-203ENST00000399759 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
TRPV1-203ENST00000399759 PHLDB1Q86UU1 1377 aa12.79□□□□□ -0.36
TRPV1-203ENST00000399759 RSPH4AQ5TD94 716 aa12.79□□□□□ -0.36
TRPV1-203ENST00000399759 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
TRPV1-203ENST00000399759 ARID4BQ4LE39 1312 aaPredicted RBP12.79□□□□□ -0.36
TRPV1-203ENST00000399759 KANK1Q14678 1352 aa12.79□□□□□ -0.36
TRPV1-203ENST00000399759 GGT6Q6P531 493 aa12.78□□□□□ -0.36
TRPV1-203ENST00000399759 GRIN2BQ13224 1484 aa12.77□□□□□ -0.36
TRPV1-203ENST00000399759 LRRC9Q6ZRR7 1453 aa12.77□□□□□ -0.37
TRPV1-203ENST00000399759 CCDC136Q96JN2 1154 aa12.77□□□□□ -0.37
TRPV1-203ENST00000399759 EIF5BO60841 1220 aaKnown RBP12.75□□□□□ -0.37
TRPV1-203ENST00000399759 CASKIN1Q8WXD9 1431 aa12.75□□□□□ -0.37
TRPV1-203ENST00000399759 NBR1Q14596 966 aa12.75□□□□□ -0.37
TRPV1-203ENST00000399759 FGD6Q6ZV73 1430 aa12.74□□□□□ -0.37
TRPV1-203ENST00000399759 MRC2Q9UBG0 1479 aa12.73□□□□□ -0.37
TRPV1-203ENST00000399759 SPAG9O60271 1321 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms