RNA–Protein interactions for RNA: ENST00000399609.7

SRL-201, Transcript of sarcalumenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRL, Length 4,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRL-201ENST00000399609 MTUS2Q5JR59 1369 aa12.32□□□□□ -0.44
SRL-201ENST00000399609 PTPRGP23470 1445 aa12.32□□□□□ -0.44
SRL-201ENST00000399609 A0A0G2JS52 829 aa12.32□□□□□ -0.44
SRL-201ENST00000399609 GGT6Q6P531 493 aa12.32□□□□□ -0.44
SRL-201ENST00000399609 CFDP1Q9UEE9 299 aaPredicted RBP12.32□□□□□ -0.44
SRL-201ENST00000399609 ZNF326Q5BKZ1 582 aaKnown RBP12.3□□□□□ -0.44
SRL-201ENST00000399609 BICRAQ9NZM4 1560 aa12.29□□□□□ -0.44
SRL-201ENST00000399609 BCL11AQ9H165 835 aa12.29□□□□□ -0.44
SRL-201ENST00000399609 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
SRL-201ENST00000399609 CHIC2Q9UKJ5 165 aa12.26□□□□□ -0.45
SRL-201ENST00000399609 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
SRL-201ENST00000399609 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
SRL-201ENST00000399609 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
SRL-201ENST00000399609 LMOD2Q6P5Q4 547 aa12.21□□□□□ -0.46
SRL-201ENST00000399609 GAPVD1Q14C86 1478 aa12.2□□□□□ -0.46
SRL-201ENST00000399609 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
SRL-201ENST00000399609 CNGB1Q14028 1251 aaPredicted RBP12.19□□□□□ -0.46
SRL-201ENST00000399609 WIZO95785 1651 aa12.18□□□□□ -0.46
SRL-201ENST00000399609 HDGFP51858 240 aaKnown RBP12.17□□□□□ -0.46
SRL-201ENST00000399609 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
SRL-201ENST00000399609 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
SRL-201ENST00000399609 CCER1Q8TC90 406 aaPredicted RBP12.15□□□□□ -0.46
SRL-201ENST00000399609 HMGXB3Q12766 1538 aa12.14□□□□□ -0.47
SRL-201ENST00000399609 ZBTB7CA1YPR0 619 aa12.13□□□□□ -0.47
SRL-201ENST00000399609 FGD5Q6ZNL6 1462 aa12.12□□□□□ -0.47
SRL-201ENST00000399609 PRG4Q92954 1404 aaPredicted RBP12.12□□□□□ -0.47
SRL-201ENST00000399609 LAMC3Q9Y6N6 1575 aa12.12□□□□□ -0.47
SRL-201ENST00000399609 EID1Q9Y6B2 187 aa12.11□□□□□ -0.47
SRL-201ENST00000399609 CLIP1P30622 1438 aa12.1□□□□□ -0.47
SRL-201ENST00000399609 CFTRP13569 1480 aa12.1□□□□□ -0.47
SRL-201ENST00000399609 CCNB3Q8WWL7 1395 aa12.07□□□□□ -0.48
SRL-201ENST00000399609 KIF3BO15066 747 aa12.06□□□□□ -0.48
SRL-201ENST00000399609 HRCP23327 699 aa12.06□□□□□ -0.48
SRL-201ENST00000399609 SPAG9O60271 1321 aaKnown RBP12.05□□□□□ -0.48
SRL-201ENST00000399609 MEX3CQ5U5Q3 659 aaKnown RBP12.05□□□□□ -0.48
SRL-201ENST00000399609 CCDC9Q9Y3X0 531 aaKnown RBP12.05□□□□□ -0.48
SRL-201ENST00000399609 SNAPC4Q5SXM2 1469 aa12.05□□□□□ -0.48
SRL-201ENST00000399609 WASHC2CQ9Y4E1 1318 aa12.04□□□□□ -0.48
SRL-201ENST00000399609 CENPBP07199 599 aaPredicted RBP12.03□□□□□ -0.48
SRL-201ENST00000399609 NEUROD1Q13562 356 aa12.03□□□□□ -0.48
SRL-201ENST00000399609 FHAD1B1AJZ9 1412 aa12.03□□□□□ -0.48
SRL-201ENST00000399609 EIF5BO60841 1220 aaKnown RBP12.02□□□□□ -0.48
SRL-201ENST00000399609 TOPBP1Q92547 1522 aa12.02□□□□□ -0.48
SRL-201ENST00000399609 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
SRL-201ENST00000399609 RRP7BPQ9NSQ0 103 aa12.01□□□□□ -0.49
SRL-201ENST00000399609 KANK1Q14678 1352 aa12.01□□□□□ -0.49
SRL-201ENST00000399609 PIP4K2BP78356 416 aa12□□□□□ -0.49
SRL-201ENST00000399609 EEA1Q15075 1411 aa12□□□□□ -0.49
SRL-201ENST00000399609 GOLGA3Q08378 1498 aa11.98□□□□□ -0.49
SRL-201ENST00000399609 RGL3Q3MIN7 710 aa11.97□□□□□ -0.49
SRL-201ENST00000399609 RAPGEF3O95398 923 aa11.97□□□□□ -0.49
SRL-201ENST00000399609 DMRT2Q9Y5R5 561 aa11.96□□□□□ -0.49
SRL-201ENST00000399609 HNRNPMP52272 730 aaKnown RBP eCLIP11.96□□□□□ -0.5
SRL-201ENST00000399609 KDM2AQ9Y2K7 1162 aa11.95□□□□□ -0.5
SRL-201ENST00000399609 POLA1P09884 1462 aaPredicted RBP11.95□□□□□ -0.5
SRL-201ENST00000399609 POGZQ7Z3K3 1410 aa11.95□□□□□ -0.5
SRL-201ENST00000399609 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
SRL-201ENST00000399609 POGKQ9P215 609 aa11.94□□□□□ -0.5
SRL-201ENST00000399609 ZNF608Q9ULD9 1512 aaPredicted RBP11.94□□□□□ -0.5
SRL-201ENST00000399609 RAPGEF2Q9Y4G8 1499 aa11.94□□□□□ -0.5
SRL-201ENST00000399609 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
SRL-201ENST00000399609 NEFMP07197 916 aa11.9□□□□□ -0.5
SRL-201ENST00000399609 SYNJ2O15056 1496 aa11.88□□□□□ -0.51
SRL-201ENST00000399609 UNC13AQ9UPW8 1703 aa11.88□□□□□ -0.51
SRL-201ENST00000399609 IGF1RP08069 1367 aa11.88□□□□□ -0.51
SRL-201ENST00000399609 SYNJ1O43426 1573 aa11.87□□□□□ -0.51
SRL-201ENST00000399609 FOXD1Q16676 465 aa11.87□□□□□ -0.51
SRL-201ENST00000399609 UBAP1LF5GYI3 381 aa11.86□□□□□ -0.51
SRL-201ENST00000399609 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
SRL-201ENST00000399609 FHOD3Q2V2M9 1422 aa11.85□□□□□ -0.51
SRL-201ENST00000399609 URB2Q14146 1524 aaKnown RBP11.85□□□□□ -0.51
SRL-201ENST00000399609 RSPH4AQ5TD94 716 aa11.84□□□□□ -0.51
SRL-201ENST00000399609 MAGI1Q96QZ7 1491 aaPredicted RBP11.84□□□□□ -0.51
SRL-201ENST00000399609 AFAP1Q8N556 730 aa11.84□□□□□ -0.51
SRL-201ENST00000399609 DNMBPQ6XZF7 1577 aa11.83□□□□□ -0.52
SRL-201ENST00000399609 ATF3P18847 181 aa11.83□□□□□ -0.52
SRL-201ENST00000399609 STK26Q9P289 416 aa11.83□□□□□ -0.52
SRL-201ENST00000399609 CD109Q6YHK3 1445 aa11.82□□□□□ -0.52
SRL-201ENST00000399609 HSPA2P54652 639 aa11.82□□□□□ -0.52
SRL-201ENST00000399609 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
SRL-201ENST00000399609 PROSER2Q86WR7 435 aaPredicted RBP11.81□□□□□ -0.52
SRL-201ENST00000399609 THEMISQ8N1K5 641 aaPredicted RBP11.81□□□□□ -0.52
SRL-201ENST00000399609 NUTM2DQ5VT03 806 aaPredicted RBP11.81□□□□□ -0.52
SRL-201ENST00000399609 SAFB2Q14151 953 aaKnown RBP eCLIP11.8□□□□□ -0.52
SRL-201ENST00000399609 SF3B2Q13435 895 aaKnown RBP11.8□□□□□ -0.52
SRL-201ENST00000399609 ANKLE2Q86XL3 938 aa11.8□□□□□ -0.52
SRL-201ENST00000399609 NUTM2FA1L443 756 aa11.78□□□□□ -0.52
SRL-201ENST00000399609 CEBPAP49715 358 aaPredicted RBP11.78□□□□□ -0.52
SRL-201ENST00000399609 TMC1Q8TDI8 760 aa11.78□□□□□ -0.52
SRL-201ENST00000399609 UACAQ9BZF9 1416 aa11.78□□□□□ -0.52
SRL-201ENST00000399609 NUTM2BA6NNL0 878 aaPredicted RBP11.77□□□□□ -0.52
SRL-201ENST00000399609 NUTM2EB1AL46 878 aaPredicted RBP11.77□□□□□ -0.52
SRL-201ENST00000399609 NUTM2AQ8IVF1 878 aaPredicted RBP11.77□□□□□ -0.52
SRL-201ENST00000399609 TOM1O60784 492 aa11.77□□□□□ -0.53
SRL-201ENST00000399609 SOX12O15370 315 aa11.76□□□□□ -0.53
SRL-201ENST00000399609 TXNDC2Q86VQ3 553 aa11.76□□□□□ -0.53
SRL-201ENST00000399609 CSB-PGBD3P0DP91 1061 aa11.76□□□□□ -0.53
SRL-201ENST00000399609 ARXQ96QS3 562 aa11.75□□□□□ -0.53
SRL-201ENST00000399609 GRIN2AQ12879 1464 aa11.74□□□□□ -0.53
SRL-201ENST00000399609 NPHP1O15259 732 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms