RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 TDRD9Q8NDG6 1382 aaKnown RBP10.82□□□□□ -0.68
CX3CR1-202ENST00000399220 CFAP43Q8NDM7 1665 aa10.82□□□□□ -0.68
CX3CR1-202ENST00000399220 UGGT2Q9NYU1 1516 aa10.81□□□□□ -0.68
CX3CR1-202ENST00000399220 IQGAP2Q13576 1575 aa10.79□□□□□ -0.68
CX3CR1-202ENST00000399220 SYNJ2O15056 1496 aa10.78□□□□□ -0.68
CX3CR1-202ENST00000399220 TRIM26Q12899 539 aaPredicted RBP10.78□□□□□ -0.68
CX3CR1-202ENST00000399220 GRIN2AQ12879 1464 aa10.78□□□□□ -0.68
CX3CR1-202ENST00000399220 SNAPC4Q5SXM2 1469 aa10.77□□□□□ -0.68
CX3CR1-202ENST00000399220 FYCO1Q9BQS8 1478 aa10.76□□□□□ -0.69
CX3CR1-202ENST00000399220 KIAA0586Q9BVV6 1533 aa10.76□□□□□ -0.69
CX3CR1-202ENST00000399220 NUP160Q12769 1436 aa10.75□□□□□ -0.69
CX3CR1-202ENST00000399220 TIAM1Q13009 1591 aa10.74□□□□□ -0.69
CX3CR1-202ENST00000399220 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
CX3CR1-202ENST00000399220 PCF11O94913 1555 aaKnown RBP10.73□□□□□ -0.69
CX3CR1-202ENST00000399220 CASKIN1Q8WXD9 1431 aa10.73□□□□□ -0.69
CX3CR1-202ENST00000399220 LRRIQ1Q96JM4 1722 aa10.72□□□□□ -0.69
CX3CR1-202ENST00000399220 FMN1Q68DA7 1419 aa10.71□□□□□ -0.69
CX3CR1-202ENST00000399220 KIAA0556O60303 1618 aa10.71□□□□□ -0.69
CX3CR1-202ENST00000399220 SHROOM2Q13796 1616 aa10.7□□□□□ -0.7
CX3CR1-202ENST00000399220 DISP1Q96F81 1524 aa10.68□□□□□ -0.7
CX3CR1-202ENST00000399220 CHD1O14646 1710 aa10.68□□□□□ -0.7
CX3CR1-202ENST00000399220 EHMT2Q96KQ7 1210 aa10.67□□□□□ -0.7
CX3CR1-202ENST00000399220 HECW1Q76N89 1606 aa10.66□□□□□ -0.7
CX3CR1-202ENST00000399220 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.7
CX3CR1-202ENST00000399220 RRBP1Q9P2E9 1410 aaKnown RBP10.64□□□□□ -0.71
CX3CR1-202ENST00000399220 LRRC9Q6ZRR7 1453 aa10.64□□□□□ -0.71
CX3CR1-202ENST00000399220 FHOD3Q2V2M9 1422 aa10.63□□□□□ -0.71
CX3CR1-202ENST00000399220 ARHGEF11O15085 1522 aa10.63□□□□□ -0.71
CX3CR1-202ENST00000399220 CLASP1Q7Z460 1538 aa10.62□□□□□ -0.71
CX3CR1-202ENST00000399220 RAPGEF6Q8TEU7 1601 aa10.61□□□□□ -0.71
CX3CR1-202ENST00000399220 EHBP1L1Q8N3D4 1523 aa10.6□□□□□ -0.71
CX3CR1-202ENST00000399220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.6□□□□□ -0.71
CX3CR1-202ENST00000399220 PCGF6Q9BYE7 350 aa10.6□□□□□ -0.71
CX3CR1-202ENST00000399220 ADCY10Q96PN6 1610 aa10.59□□□□□ -0.71
CX3CR1-202ENST00000399220 ABCA8O94911 1581 aa10.58□□□□□ -0.72
CX3CR1-202ENST00000399220 SUPT6HQ7KZ85 1726 aaKnown RBP10.57□□□□□ -0.72
CX3CR1-202ENST00000399220 EPRSP07814 1512 aaKnown RBP10.55□□□□□ -0.72
CX3CR1-202ENST00000399220 CARMIL2Q6F5E8 1435 aa10.54□□□□□ -0.72
CX3CR1-202ENST00000399220 HRCP23327 699 aa10.54□□□□□ -0.72
CX3CR1-202ENST00000399220 APLP2Q06481 763 aa10.54□□□□□ -0.72
CX3CR1-202ENST00000399220 MAGI3Q5TCQ9 1506 aa10.53□□□□□ -0.72
CX3CR1-202ENST00000399220 NUP153P49790 1475 aaKnown RBP10.52□□□□□ -0.72
CX3CR1-202ENST00000399220 CHMP7Q8WUX9 453 aaPredicted RBP10.52□□□□□ -0.72
CX3CR1-202ENST00000399220 KANK4Q5T7N3 995 aaPredicted RBP10.52□□□□□ -0.73
CX3CR1-202ENST00000399220 TCOF1Q13428 1488 aaKnown RBP10.51□□□□□ -0.73
CX3CR1-202ENST00000399220 CCNB3Q8WWL7 1395 aa10.48□□□□□ -0.73
CX3CR1-202ENST00000399220 UHRF1BP1LA0JNW5 1464 aa10.48□□□□□ -0.73
CX3CR1-202ENST00000399220 ITSN2Q9NZM3 1697 aa10.47□□□□□ -0.73
CX3CR1-202ENST00000399220 NCOA2Q15596 1464 aa10.47□□□□□ -0.73
CX3CR1-202ENST00000399220 JPH4Q96JJ6 628 aa10.47□□□□□ -0.73
CX3CR1-202ENST00000399220 PHLDB1Q86UU1 1377 aa10.46□□□□□ -0.73
CX3CR1-202ENST00000399220 MIA2Q96PC5 1412 aa10.46□□□□□ -0.74
CX3CR1-202ENST00000399220 MYOM3Q5VTT5 1437 aa10.45□□□□□ -0.74
CX3CR1-202ENST00000399220 PRG4Q92954 1404 aaPredicted RBP10.44□□□□□ -0.74
CX3CR1-202ENST00000399220 CDK13Q14004 1512 aaKnown RBP10.44□□□□□ -0.74
CX3CR1-202ENST00000399220 ZEB1P37275 1124 aaPredicted RBP10.44□□□□□ -0.74
CX3CR1-202ENST00000399220 FGD6Q6ZV73 1430 aa10.44□□□□□ -0.74
CX3CR1-202ENST00000399220 PTPN23Q9H3S7 1636 aa10.44□□□□□ -0.74
CX3CR1-202ENST00000399220 RANGAP1P46060 587 aaPredicted RBP10.43□□□□□ -0.74
CX3CR1-202ENST00000399220 ABCC2Q92887 1545 aa10.43□□□□□ -0.74
CX3CR1-202ENST00000399220 TROQ12816 1431 aaPredicted RBP10.42□□□□□ -0.74
CX3CR1-202ENST00000399220 AKNAQ7Z591 1439 aa10.42□□□□□ -0.74
CX3CR1-202ENST00000399220 PLB1Q6P1J6 1458 aa10.42□□□□□ -0.74
CX3CR1-202ENST00000399220 P3H3Q8IVL6 736 aa10.42□□□□□ -0.74
CX3CR1-202ENST00000399220 GCC2Q8IWJ2 1684 aa10.41□□□□□ -0.74
CX3CR1-202ENST00000399220 PPARGC1BQ86YN6 1023 aaKnown RBP10.41□□□□□ -0.74
CX3CR1-202ENST00000399220 MTUS2Q5JR59 1369 aa10.41□□□□□ -0.74
CX3CR1-202ENST00000399220 CROCC2H7BZ55 1655 aa10.4□□□□□ -0.74
CX3CR1-202ENST00000399220 KDM5BQ9UGL1 1544 aa10.4□□□□□ -0.75
CX3CR1-202ENST00000399220 ABCC10Q5T3U5 1492 aa10.4□□□□□ -0.75
CX3CR1-202ENST00000399220 CDC42BPAQ5VT25 1732 aa10.4□□□□□ -0.75
CX3CR1-202ENST00000399220 KIF14Q15058 1648 aa10.39□□□□□ -0.75
CX3CR1-202ENST00000399220 ERCC6L2Q5T890 1561 aa10.39□□□□□ -0.75
CX3CR1-202ENST00000399220 ATP10BO94823 1461 aa10.39□□□□□ -0.75
CX3CR1-202ENST00000399220 UACAQ9BZF9 1416 aa10.39□□□□□ -0.75
CX3CR1-202ENST00000399220 DNMT1P26358 1616 aaKnown RBP10.39□□□□□ -0.75
CX3CR1-202ENST00000399220 CLSPNQ9HAW4 1339 aa10.38□□□□□ -0.75
CX3CR1-202ENST00000399220 PTPRGP23470 1445 aa10.37□□□□□ -0.75
CX3CR1-202ENST00000399220 PREX2Q70Z35 1606 aa10.37□□□□□ -0.75
CX3CR1-202ENST00000399220 ZCCHC11Q5TAX3 1644 aaKnown RBP10.36□□□□□ -0.75
CX3CR1-202ENST00000399220 ADGBQ8N7X0 1667 aa10.36□□□□□ -0.75
CX3CR1-202ENST00000399220 ARAP3Q8WWN8 1544 aa10.35□□□□□ -0.75
CX3CR1-202ENST00000399220 ARHGEF5Q12774 1597 aa10.34□□□□□ -0.75
CX3CR1-202ENST00000399220 HFM1A2PYH4 1435 aa10.33□□□□□ -0.76
CX3CR1-202ENST00000399220 CDK11AQ9UQ88 783 aaPredicted RBP10.33□□□□□ -0.76
CX3CR1-202ENST00000399220 FBLN2P98095 1184 aa10.33□□□□□ -0.76
CX3CR1-202ENST00000399220 GPATCH8Q9UKJ3 1502 aaKnown RBP10.33□□□□□ -0.76
CX3CR1-202ENST00000399220 CDC42BPBQ9Y5S2 1711 aa10.33□□□□□ -0.76
CX3CR1-202ENST00000399220 ACIN1Q9UKV3 1341 aaKnown RBP10.32□□□□□ -0.76
CX3CR1-202ENST00000399220 SHANK2Q9UPX8 1470 aa10.32□□□□□ -0.76
CX3CR1-202ENST00000399220 ROCK1Q13464 1354 aa10.32□□□□□ -0.76
CX3CR1-202ENST00000399220 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
CX3CR1-202ENST00000399220 SETD5Q9C0A6 1442 aa10.31□□□□□ -0.76
CX3CR1-202ENST00000399220 MYO5CQ9NQX4 1742 aa10.31□□□□□ -0.76
CX3CR1-202ENST00000399220 MAST1Q9Y2H9 1570 aa10.31□□□□□ -0.76
CX3CR1-202ENST00000399220 PTPRKQ15262 1439 aa10.29□□□□□ -0.76
CX3CR1-202ENST00000399220 DHX57Q6P158 1386 aaKnown RBP10.29□□□□□ -0.76
CX3CR1-202ENST00000399220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.28□□□□□ -0.76
CX3CR1-202ENST00000399220 CAMSAP2Q08AD1 1489 aa10.28□□□□□ -0.76
CX3CR1-202ENST00000399220 ABCA9Q8IUA7 1624 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms