RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 PPP4R2Q9NY27 417 aa11.45□□□□□ -0.58
CTNND1-205ENST00000399050 LAS1LQ9Y4W2 734 aaKnown RBP11.45□□□□□ -0.58
CTNND1-205ENST00000399050 GOLGA3Q08378 1498 aa11.43□□□□□ -0.58
CTNND1-205ENST00000399050 DEKP35659 375 aaKnown RBP11.43□□□□□ -0.58
CTNND1-205ENST00000399050 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
CTNND1-205ENST00000399050 SENP3-EIF4A1A0A087X0R7 540 aa11.41□□□□□ -0.58
CTNND1-205ENST00000399050 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
CTNND1-205ENST00000399050 ERICH6BQ5W0A0 696 aa11.4□□□□□ -0.58
CTNND1-205ENST00000399050 NAP1L5Q96NT1 182 aaPredicted RBP11.39□□□□□ -0.59
CTNND1-205ENST00000399050 MTUS2Q5JR59 1369 aa11.38□□□□□ -0.59
CTNND1-205ENST00000399050 B4GALNT3Q6L9W6 998 aa11.37□□□□□ -0.59
CTNND1-205ENST00000399050 CHGAP10645 457 aaKnown RBP11.37□□□□□ -0.59
CTNND1-205ENST00000399050 RRP7BPQ9NSQ0 103 aa11.36□□□□□ -0.59
CTNND1-205ENST00000399050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.35□□□□□ -0.591e-8■■□□□ 13.5
CTNND1-205ENST00000399050 EEA1Q15075 1411 aa11.35□□□□□ -0.59
CTNND1-205ENST00000399050 GOLGA6L22H0YM25 854 aa11.34□□□□□ -0.59
CTNND1-205ENST00000399050 TNIKQ9UKE5 1360 aa11.34□□□□□ -0.59
CTNND1-205ENST00000399050 MYH16Q9H6N6 1097 aa11.33□□□□□ -0.6
CTNND1-205ENST00000399050 NCLP19338 710 aaKnown RBP11.33□□□□□ -0.6
CTNND1-205ENST00000399050 TNNT2P45379 298 aaPredicted RBP11.33□□□□□ -0.6
CTNND1-205ENST00000399050 TSHZ2Q9NRE2 1034 aa11.32□□□□□ -0.6
CTNND1-205ENST00000399050 SIN3AQ96ST3 1273 aa11.32□□□□□ -0.6
CTNND1-205ENST00000399050 RSF1Q96T23 1441 aaPredicted RBP11.31□□□□□ -0.6
CTNND1-205ENST00000399050 PTMAP06454 111 aaKnown RBP11.29□□□□□ -0.6
CTNND1-205ENST00000399050 RGS3P49796 1198 aa11.28□□□□□ -0.6
CTNND1-205ENST00000399050 DNTTIP2Q5QJE6 756 aaKnown RBP11.28□□□□□ -0.6
CTNND1-205ENST00000399050 CCER2I3L3R5 266 aa11.27□□□□□ -0.61
CTNND1-205ENST00000399050 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
CTNND1-205ENST00000399050 TSPY4P0CV99 314 aa11.26□□□□□ -0.61
CTNND1-205ENST00000399050 TSPY10P0CW01 314 aa11.26□□□□□ -0.61
CTNND1-205ENST00000399050 STAG3Q9UJ98 1225 aa11.24□□□□□ -0.61
CTNND1-205ENST00000399050 L1TD1Q5T7N2 865 aaKnown RBP11.22□□□□□ -0.61
CTNND1-205ENST00000399050 FTSJ3Q8IY81 847 aaKnown RBP11.22□□□□□ -0.61
CTNND1-205ENST00000399050 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
CTNND1-205ENST00000399050 RB1CC1Q8TDY2 1594 aa11.22□□□□□ -0.61
CTNND1-205ENST00000399050 CARD11Q9BXL7 1154 aa11.22□□□□□ -0.61
CTNND1-205ENST00000399050 TPRNQ4KMQ1 711 aa11.21□□□□□ -0.61
CTNND1-205ENST00000399050 WRNQ14191 1432 aaPredicted RBP eCLIP11.21□□□□□ -0.61
CTNND1-205ENST00000399050 KNSTRNQ9Y448 316 aa11.2□□□□□ -0.62
CTNND1-205ENST00000399050 HSP90AB1P08238 724 aaKnown RBP11.2□□□□□ -0.62
CTNND1-205ENST00000399050 CASC1Q6TDU7 716 aa11.2□□□□□ -0.62
CTNND1-205ENST00000399050 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
CTNND1-205ENST00000399050 RGL3Q3MIN7 710 aa11.19□□□□□ -0.62
CTNND1-205ENST00000399050 FRAT1Q92837 279 aaPredicted RBP11.17□□□□□ -0.62
CTNND1-205ENST00000399050 CC2D1BQ5T0F9 858 aaKnown RBP11.17□□□□□ -0.62
CTNND1-205ENST00000399050 CFAP53Q96M91 514 aa11.16□□□□□ -0.62
CTNND1-205ENST00000399050 NEUROD2Q15784 382 aa11.16□□□□□ -0.62
CTNND1-205ENST00000399050 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
CTNND1-205ENST00000399050 MSNP26038 577 aaKnown RBP11.15□□□□□ -0.63
CTNND1-205ENST00000399050 CDCA8Q53HL2 280 aa11.14□□□□□ -0.63
CTNND1-205ENST00000399050 HSCBQ8IWL3 235 aa11.14□□□□□ -0.63
CTNND1-205ENST00000399050 ESF1Q9H501 851 aaKnown RBP11.14□□□□□ -0.63
CTNND1-205ENST00000399050 PLCB2Q00722 1185 aa11.14□□□□□ -0.63
CTNND1-205ENST00000399050 TIMELESSQ9UNS1 1208 aa11.14□□□□□ -0.63
CTNND1-205ENST00000399050 IPO9Q96P70 1041 aaKnown RBP11.13□□□□□ -0.63
CTNND1-205ENST00000399050 ARID4BQ4LE39 1312 aaPredicted RBP11.13□□□□□ -0.63
CTNND1-205ENST00000399050 HSPA5P11021 654 aaKnown RBP11.13□□□□□ -0.63
CTNND1-205ENST00000399050 SETD5Q9C0A6 1442 aa11.13□□□□□ -0.63
CTNND1-205ENST00000399050 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
CTNND1-205ENST00000399050 ZRSR1Q15695 479 aaKnown RBP11.11□□□□□ -0.63
CTNND1-205ENST00000399050 TCERG1O14776 1098 aaKnown RBP11.11□□□□□ -0.63
CTNND1-205ENST00000399050 CDK11BP21127 795 aaKnown RBP11.11□□□□□ -0.63
CTNND1-205ENST00000399050 SOGA1O94964 1423 aa11.11□□□□□ -0.63
CTNND1-205ENST00000399050 SENP3Q9H4L4 574 aaPredicted RBP11.1□□□□□ -0.63
CTNND1-205ENST00000399050 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
CTNND1-205ENST00000399050 VPS8Q8N3P4 1428 aa11.07□□□□□ -0.64
CTNND1-205ENST00000399050 MS4A1P11836 297 aa11.07□□□□□ -0.64
CTNND1-205ENST00000399050 GZF1Q9H116 711 aaPredicted RBP11.07□□□□□ -0.64
CTNND1-205ENST00000399050 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
CTNND1-205ENST00000399050 CHAF1AQ13111 956 aaPredicted RBP11.07□□□□□ -0.64
CTNND1-205ENST00000399050 CFDP1Q9UEE9 299 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-205ENST00000399050 PNNQ9H307 717 aaKnown RBP11.06□□□□□ -0.64
CTNND1-205ENST00000399050 PLPPR3Q6T4P5 718 aa11.05□□□□□ -0.64
CTNND1-205ENST00000399050 SLKQ9H2G2 1235 aaPredicted RBP11.05□□□□□ -0.64
CTNND1-205ENST00000399050 RAB3GAP2Q9H2M9 1393 aa11.05□□□□□ -0.64
CTNND1-205ENST00000399050 GOLGA6L6A8MZA4 724 aa11.04□□□□□ -0.64
CTNND1-205ENST00000399050 CHMP4BQ9H444 224 aaKnown RBP11.04□□□□□ -0.64
CTNND1-205ENST00000399050 KCNH8Q96L42 1107 aa11.04□□□□□ -0.64
CTNND1-205ENST00000399050 PLEKHD1A6NEE1 506 aa11.03□□□□□ -0.64
CTNND1-205ENST00000399050 FHAD1B1AJZ9 1412 aa11.03□□□□□ -0.64
CTNND1-205ENST00000399050 NUDCQ9Y266 331 aa11.03□□□□□ -0.64
CTNND1-205ENST00000399050 TMF1P82094 1093 aa11.03□□□□□ -0.64
CTNND1-205ENST00000399050 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
CTNND1-205ENST00000399050 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
CTNND1-205ENST00000399050 CHMP7Q8WUX9 453 aaPredicted RBP11.03□□□□□ -0.64
CTNND1-205ENST00000399050 GOLGA6L3A6NEY3 463 aa11.03□□□□□ -0.64
CTNND1-205ENST00000399050 ARID3AQ99856 593 aa11.03□□□□□ -0.64
CTNND1-205ENST00000399050 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.64
CTNND1-205ENST00000399050 PTMSP20962 102 aa11.02□□□□□ -0.65
CTNND1-205ENST00000399050 DCAF11Q8TEB1 546 aa11.02□□□□□ -0.65
CTNND1-205ENST00000399050 GBP4Q96PP9 640 aa11.02□□□□□ -0.65
CTNND1-205ENST00000399050 ARHGAP35Q9NRY4 1499 aa11.02□□□□□ -0.65
CTNND1-205ENST00000399050 ABCC8Q09428 1581 aa11.02□□□□□ -0.65
CTNND1-205ENST00000399050 NPM1P06748 294 aaKnown RBP eCLIP11.02□□□□□ -0.65
CTNND1-205ENST00000399050 BAZ1BQ9UIG0 1483 aaKnown RBP11.02□□□□□ -0.65
CTNND1-205ENST00000399050 KTN1Q86UP2 1357 aaKnown RBP11.02□□□□□ -0.65
CTNND1-205ENST00000399050 U2SURPO15042 1029 aaKnown RBP11□□□□□ -0.65
CTNND1-205ENST00000399050 FANCIQ9NVI1 1328 aa10.99□□□□□ -0.65
CTNND1-205ENST00000399050 DRC7Q8IY82 874 aa10.99□□□□□ -0.65
CTNND1-205ENST00000399050 USP35Q9P2H5 1018 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms