RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 KIAA0586Q9BVV6 1533 aa24.56■■□□□ 1.52
COL13A1-204ENST00000398975 JPH4Q96JJ6 628 aa24.56■■□□□ 1.52
COL13A1-204ENST00000398975 PRG4Q92954 1404 aaPredicted RBP24.54■■□□□ 1.52
COL13A1-204ENST00000398975 RAPGEF2Q9Y4G8 1499 aa24.52■■□□□ 1.52
COL13A1-204ENST00000398975 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
COL13A1-204ENST00000398975 PRXQ9BXM0 1461 aa24.46■■□□□ 1.51
COL13A1-204ENST00000398975 IQGAP2Q13576 1575 aa24.42■■□□□ 1.5
COL13A1-204ENST00000398975 CSRNP3Q8WYN3 585 aa24.36■■□□□ 1.49
COL13A1-204ENST00000398975 CTTNBP2Q8WZ74 1663 aa24.34■■□□□ 1.49
COL13A1-204ENST00000398975 EEA1Q15075 1411 aa24.32■■□□□ 1.48
COL13A1-204ENST00000398975 DISP1Q96F81 1524 aa24.31■■□□□ 1.48
COL13A1-204ENST00000398975 UGGT2Q9NYU1 1516 aa24.3■■□□□ 1.48
COL13A1-204ENST00000398975 FAM9AQ8IZU1 332 aaPredicted RBP24.3■■□□□ 1.48
COL13A1-204ENST00000398975 ADCY10Q96PN6 1610 aa24.24■■□□□ 1.47
COL13A1-204ENST00000398975 CARMIL2Q6F5E8 1435 aa24.24■■□□□ 1.47
COL13A1-204ENST00000398975 KIAA0556O60303 1618 aa24.21■■□□□ 1.47
COL13A1-204ENST00000398975 PTPRGP23470 1445 aa24.21■■□□□ 1.47
COL13A1-204ENST00000398975 TNIKQ9UKE5 1360 aa24.21■■□□□ 1.47
COL13A1-204ENST00000398975 TRHP20396 242 aaPredicted RBP24.19■■□□□ 1.46
COL13A1-204ENST00000398975 TTBK1Q5TCY1 1321 aaPredicted RBP24.18■■□□□ 1.46
COL13A1-204ENST00000398975 KIF21BO75037 1637 aa24.17■■□□□ 1.46
COL13A1-204ENST00000398975 GOLGA3Q08378 1498 aa24.08■■□□□ 1.45
COL13A1-204ENST00000398975 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
COL13A1-204ENST00000398975 UACAQ9BZF9 1416 aa24.06■■□□□ 1.44
COL13A1-204ENST00000398975 UHRF1BP1LA0JNW5 1464 aa24.06■■□□□ 1.44
COL13A1-204ENST00000398975 MAPKBP1O60336 1514 aa24.05■■□□□ 1.44
COL13A1-204ENST00000398975 KIF13AQ9H1H9 1805 aa24.04■■□□□ 1.44
COL13A1-204ENST00000398975 ABCC2Q92887 1545 aa24.04■■□□□ 1.44
COL13A1-204ENST00000398975 SAMD9Q5K651 1589 aa24.03■■□□□ 1.44
COL13A1-204ENST00000398975 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
COL13A1-204ENST00000398975 PLB1Q6P1J6 1458 aa24■■□□□ 1.43
COL13A1-204ENST00000398975 NPM1P06748 294 aaKnown RBP eCLIP24■■□□□ 1.43
COL13A1-204ENST00000398975 P3H3Q8IVL6 736 aa23.99■■□□□ 1.43
COL13A1-204ENST00000398975 ABCA8O94911 1581 aa23.98■■□□□ 1.43
COL13A1-204ENST00000398975 KDM5BQ9UGL1 1544 aa23.95■■□□□ 1.43
COL13A1-204ENST00000398975 ABCC10Q5T3U5 1492 aa23.95■■□□□ 1.42
COL13A1-204ENST00000398975 DIP2BQ9P265 1576 aa23.95■■□□□ 1.42
COL13A1-204ENST00000398975 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
COL13A1-204ENST00000398975 ZCCHC11Q5TAX3 1644 aaKnown RBP23.93■■□□□ 1.42
COL13A1-204ENST00000398975 ASXL2Q76L83 1435 aa23.9■■□□□ 1.42
COL13A1-204ENST00000398975 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.41
COL13A1-204ENST00000398975 FHOD3Q2V2M9 1422 aa23.88■■□□□ 1.41
COL13A1-204ENST00000398975 FAM69CQ0P6D2 419 aa23.87■■□□□ 1.41
COL13A1-204ENST00000398975 EFCAB5A4FU69 1503 aa23.84■■□□□ 1.41
COL13A1-204ENST00000398975 RAPGEF6Q8TEU7 1601 aa23.8■■□□□ 1.4
COL13A1-204ENST00000398975 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
COL13A1-204ENST00000398975 ATP10BO94823 1461 aa23.77■■□□□ 1.4
COL13A1-204ENST00000398975 ARID3CA6NKF2 412 aa23.77■■□□□ 1.4
COL13A1-204ENST00000398975 EPRSP07814 1512 aaKnown RBP23.77■■□□□ 1.4
COL13A1-204ENST00000398975 GLI2P10070 1586 aa23.77■■□□□ 1.4
COL13A1-204ENST00000398975 TSPOAP1O95153 1857 aa23.76■■□□□ 1.39
COL13A1-204ENST00000398975 NUP153P49790 1475 aaKnown RBP23.75■■□□□ 1.39
COL13A1-204ENST00000398975 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
COL13A1-204ENST00000398975 PPRC1Q5VV67 1664 aaKnown RBP23.73■■□□□ 1.39
COL13A1-204ENST00000398975 MAP3K4Q9Y6R4 1608 aa23.69■■□□□ 1.38
COL13A1-204ENST00000398975 KCNH8Q96L42 1107 aa23.62■■□□□ 1.37
COL13A1-204ENST00000398975 FMN1Q68DA7 1419 aa23.59■■□□□ 1.37
COL13A1-204ENST00000398975 CDK13Q14004 1512 aaKnown RBP23.59■■□□□ 1.37
COL13A1-204ENST00000398975 CFAP43Q8NDM7 1665 aa23.57■■□□□ 1.36
COL13A1-204ENST00000398975 CLIP1P30622 1438 aa23.55■■□□□ 1.36
COL13A1-204ENST00000398975 KDM6BO15054 1643 aa23.55■■□□□ 1.36
COL13A1-204ENST00000398975 LRRIQ1Q96JM4 1722 aa23.54■■□□□ 1.36
COL13A1-204ENST00000398975 HECW1Q76N89 1606 aa23.53■■□□□ 1.36
COL13A1-204ENST00000398975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-204ENST00000398975 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
COL13A1-204ENST00000398975 CD109Q6YHK3 1445 aa23.52■■□□□ 1.36
COL13A1-204ENST00000398975 ABCA9Q8IUA7 1624 aa23.51■■□□□ 1.35
COL13A1-204ENST00000398975 COL17A1Q9UMD9 1497 aaPredicted RBP23.51■■□□□ 1.35
COL13A1-204ENST00000398975 PCF11O94913 1555 aaKnown RBP23.51■■□□□ 1.35
COL13A1-204ENST00000398975 MAGI3Q5TCQ9 1506 aa23.5■■□□□ 1.35
COL13A1-204ENST00000398975 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
COL13A1-204ENST00000398975 TEX14Q8IWB6 1497 aa23.48■■□□□ 1.35
COL13A1-204ENST00000398975 ATP1B4Q9UN42 357 aaPredicted RBP23.47■■□□□ 1.35
COL13A1-204ENST00000398975 CASKIN1Q8WXD9 1431 aa23.45■■□□□ 1.34
COL13A1-204ENST00000398975 PLEKHD1A6NEE1 506 aa23.45■■□□□ 1.34
COL13A1-204ENST00000398975 CEP162Q5TB80 1403 aa23.44■■□□□ 1.34
COL13A1-204ENST00000398975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.41■■□□□ 1.34
COL13A1-204ENST00000398975 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
COL13A1-204ENST00000398975 FYCO1Q9BQS8 1478 aa23.38■■□□□ 1.33
COL13A1-204ENST00000398975 KIF14Q15058 1648 aa23.36■■□□□ 1.33
COL13A1-204ENST00000398975 TROQ12816 1431 aaPredicted RBP23.33■■□□□ 1.32
COL13A1-204ENST00000398975 CCDC18Q5T9S5 1454 aa23.32■■□□□ 1.32
COL13A1-204ENST00000398975 ARAP3Q8WWN8 1544 aa23.31■■□□□ 1.32
COL13A1-204ENST00000398975 NEO1Q92859 1461 aa23.29■■□□□ 1.32
COL13A1-204ENST00000398975 CDK11AQ9UQ88 783 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-204ENST00000398975 FRMPD1Q5SYB0 1578 aa23.24■■□□□ 1.31
COL13A1-204ENST00000398975 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
COL13A1-204ENST00000398975 FANCAO15360 1455 aa23.24■■□□□ 1.31
COL13A1-204ENST00000398975 PLCH2O75038 1416 aa23.23■■□□□ 1.31
COL13A1-204ENST00000398975 MYO5CQ9NQX4 1742 aa23.22■■□□□ 1.31
COL13A1-204ENST00000398975 AKNAQ7Z591 1439 aa23.2■■□□□ 1.3
COL13A1-204ENST00000398975 RAPGEF3O95398 923 aa23.2■■□□□ 1.3
COL13A1-204ENST00000398975 CFAP74Q9C0B2 1584 aa23.19■■□□□ 1.3
COL13A1-204ENST00000398975 RICTORQ6R327 1708 aa23.16■■□□□ 1.3
COL13A1-204ENST00000398975 CDC42BPBQ9Y5S2 1711 aa23.16■■□□□ 1.3
COL13A1-204ENST00000398975 VPS8Q8N3P4 1428 aa23.16■■□□□ 1.3
COL13A1-204ENST00000398975 PREX2Q70Z35 1606 aa23.13■■□□□ 1.29
COL13A1-204ENST00000398975 CDC42BPAQ5VT25 1732 aa23.13■■□□□ 1.29
COL13A1-204ENST00000398975 DENND4BO75064 1496 aaPredicted RBP23.12■■□□□ 1.29
COL13A1-204ENST00000398975 KDM4FA0A1W2PPD8 638 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms