RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 CLIP1P30622 1438 aa26.72■■□□□ 1.87
CDH23-204ENST00000398792 CEP170Q5SW79 1584 aa26.72■■□□□ 1.87
CDH23-204ENST00000398792 NUP160Q12769 1436 aa26.69■■□□□ 1.86
CDH23-204ENST00000398792 FBLN2P98095 1184 aa26.68■■□□□ 1.86
CDH23-204ENST00000398792 IQGAP2Q13576 1575 aa26.68■■□□□ 1.86
CDH23-204ENST00000398792 KIAA0586Q9BVV6 1533 aa26.64■■□□□ 1.86
CDH23-204ENST00000398792 ARHGAP35Q9NRY4 1499 aa26.61■■□□□ 1.85
CDH23-204ENST00000398792 RANGAP1P46060 587 aaPredicted RBP26.61■■□□□ 1.85
CDH23-204ENST00000398792 EFCAB5A4FU69 1503 aa26.59■■□□□ 1.85
CDH23-204ENST00000398792 SAMD9Q5K651 1589 aa26.56■■□□□ 1.84
CDH23-204ENST00000398792 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
CDH23-204ENST00000398792 UGGT2Q9NYU1 1516 aa26.54■■□□□ 1.84
CDH23-204ENST00000398792 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
CDH23-204ENST00000398792 VPS8Q8N3P4 1428 aa26.45■■□□□ 1.83
CDH23-204ENST00000398792 KIAA0556O60303 1618 aa26.43■■□□□ 1.82
CDH23-204ENST00000398792 FHOD3Q2V2M9 1422 aa26.42■■□□□ 1.82
CDH23-204ENST00000398792 SHROOM2Q13796 1616 aa26.41■■□□□ 1.82
CDH23-204ENST00000398792 DISP1Q96F81 1524 aa26.41■■□□□ 1.82
CDH23-204ENST00000398792 P3H3Q8IVL6 736 aa26.36■■□□□ 1.81
CDH23-204ENST00000398792 JPH4Q96JJ6 628 aa26.35■■□□□ 1.81
CDH23-204ENST00000398792 CARMIL2Q6F5E8 1435 aa26.3■■□□□ 1.8
CDH23-204ENST00000398792 FMN1Q68DA7 1419 aa26.3■■□□□ 1.8
CDH23-204ENST00000398792 PCF11O94913 1555 aaKnown RBP26.29■■□□□ 1.8
CDH23-204ENST00000398792 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
CDH23-204ENST00000398792 OSCARQ8IYS5 282 aa26.24■■□□□ 1.79
CDH23-204ENST00000398792 FYCO1Q9BQS8 1478 aa26.22■■□□□ 1.79
CDH23-204ENST00000398792 CASKIN1Q8WXD9 1431 aa26.21■■□□□ 1.79
CDH23-204ENST00000398792 ERCC6L2Q5T890 1561 aa26.19■■□□□ 1.78
CDH23-204ENST00000398792 HECW1Q76N89 1606 aa26.13■■□□□ 1.77
CDH23-204ENST00000398792 CFAP43Q8NDM7 1665 aa26.11■■□□□ 1.77
CDH23-204ENST00000398792 RAPGEF6Q8TEU7 1601 aa26.11■■□□□ 1.77
CDH23-204ENST00000398792 MAP3K1Q13233 1512 aa26.09■■□□□ 1.77
CDH23-204ENST00000398792 TIAM1Q13009 1591 aa26.09■■□□□ 1.77
CDH23-204ENST00000398792 LRRIQ1Q96JM4 1722 aa26.08■■□□□ 1.77
CDH23-204ENST00000398792 APLP2Q06481 763 aa26.06■■□□□ 1.76
CDH23-204ENST00000398792 TTBK1Q5TCY1 1321 aaPredicted RBP26.06■■□□□ 1.76
CDH23-204ENST00000398792 ABCA8O94911 1581 aa26.05■■□□□ 1.76
CDH23-204ENST00000398792 PTPRGP23470 1445 aa26.05■■□□□ 1.76
CDH23-204ENST00000398792 PLB1Q6P1J6 1458 aa26.05■■□□□ 1.76
CDH23-204ENST00000398792 NUP153P49790 1475 aaKnown RBP26.01■■□□□ 1.75
CDH23-204ENST00000398792 CCDC18Q5T9S5 1454 aa26.01■■□□□ 1.75
CDH23-204ENST00000398792 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
CDH23-204ENST00000398792 EPRSP07814 1512 aaKnown RBP25.98■■□□□ 1.75
CDH23-204ENST00000398792 PPARGC1BQ86YN6 1023 aaKnown RBP25.97■■□□□ 1.75
CDH23-204ENST00000398792 CDK13Q14004 1512 aaKnown RBP25.94■■□□□ 1.74
CDH23-204ENST00000398792 UACAQ9BZF9 1416 aa25.93■■□□□ 1.74
CDH23-204ENST00000398792 LRRC9Q6ZRR7 1453 aa25.93■■□□□ 1.74
CDH23-204ENST00000398792 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
CDH23-204ENST00000398792 ABCC2Q92887 1545 aa25.92■■□□□ 1.74
CDH23-204ENST00000398792 KANK4Q5T7N3 995 aaPredicted RBP25.9■■□□□ 1.74
CDH23-204ENST00000398792 UHRF1BP1LA0JNW5 1464 aa25.87■■□□□ 1.73
CDH23-204ENST00000398792 EHBP1L1Q8N3D4 1523 aa25.86■■□□□ 1.73
CDH23-204ENST00000398792 MAGI3Q5TCQ9 1506 aa25.85■■□□□ 1.73
CDH23-204ENST00000398792 RIMBP3CA6NJZ7 1639 aa25.83■■□□□ 1.73
CDH23-204ENST00000398792 RIMBP3BA6NNM3 1639 aa25.83■■□□□ 1.73
CDH23-204ENST00000398792 RIMBP3Q9UFD9 1639 aa25.83■■□□□ 1.73
CDH23-204ENST00000398792 ARID3CA6NKF2 412 aa25.83■■□□□ 1.73
CDH23-204ENST00000398792 ATP10BO94823 1461 aa25.81■■□□□ 1.72
CDH23-204ENST00000398792 ADCY10Q96PN6 1610 aa25.81■■□□□ 1.72
CDH23-204ENST00000398792 MTUS2Q5JR59 1369 aa25.8■■□□□ 1.72
CDH23-204ENST00000398792 KDM5BQ9UGL1 1544 aa25.75■■□□□ 1.71
CDH23-204ENST00000398792 ZCCHC11Q5TAX3 1644 aaKnown RBP25.75■■□□□ 1.71
CDH23-204ENST00000398792 SUPT6HQ7KZ85 1726 aaKnown RBP25.75■■□□□ 1.71
CDH23-204ENST00000398792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.72■■□□□ 1.71
CDH23-204ENST00000398792 HNRNPUL2Q1KMD3 747 aaKnown RBP25.72■■□□□ 1.71
CDH23-204ENST00000398792 TRIM26Q12899 539 aaPredicted RBP25.71■■□□□ 1.71
CDH23-204ENST00000398792 TROQ12816 1431 aaPredicted RBP25.71■■□□□ 1.71
CDH23-204ENST00000398792 CDK11AQ9UQ88 783 aaPredicted RBP25.7■■□□□ 1.71
CDH23-204ENST00000398792 NCOA2Q15596 1464 aa25.68■■□□□ 1.7
CDH23-204ENST00000398792 PHLDB1Q86UU1 1377 aa25.65■■□□□ 1.7
CDH23-204ENST00000398792 KIF14Q15058 1648 aa25.63■■□□□ 1.69
CDH23-204ENST00000398792 RRBP1Q9P2E9 1410 aaKnown RBP25.6■■□□□ 1.69
CDH23-204ENST00000398792 PLEKHD1A6NEE1 506 aa25.6■■□□□ 1.69
CDH23-204ENST00000398792 MYOM3Q5VTT5 1437 aa25.56■■□□□ 1.68
CDH23-204ENST00000398792 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
CDH23-204ENST00000398792 CYB5RLQ6IPT4 315 aa25.54■■□□□ 1.68
CDH23-204ENST00000398792 ABCC10Q5T3U5 1492 aa25.52■■□□□ 1.68
CDH23-204ENST00000398792 WDR7Q9Y4E6 1490 aa25.52■■□□□ 1.68
CDH23-204ENST00000398792 FGD6Q6ZV73 1430 aa25.52■■□□□ 1.68
CDH23-204ENST00000398792 CCNB3Q8WWL7 1395 aa25.52■■□□□ 1.68
CDH23-204ENST00000398792 ITSN2Q9NZM3 1697 aa25.5■■□□□ 1.67
CDH23-204ENST00000398792 ASXL2Q76L83 1435 aa25.48■■□□□ 1.67
CDH23-204ENST00000398792 TTC37Q6PGP7 1564 aa25.47■■□□□ 1.67
CDH23-204ENST00000398792 NPM1P06748 294 aaKnown RBP eCLIP25.47■■□□□ 1.67
CDH23-204ENST00000398792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
CDH23-204ENST00000398792 CDC42BPAQ5VT25 1732 aa25.45■■□□□ 1.67
CDH23-204ENST00000398792 MAPKBP1O60336 1514 aa25.45■■□□□ 1.66
CDH23-204ENST00000398792 MIA2Q96PC5 1412 aa25.44■■□□□ 1.66
CDH23-204ENST00000398792 GPATCH8Q9UKJ3 1502 aaKnown RBP25.44■■□□□ 1.66
CDH23-204ENST00000398792 PTPN23Q9H3S7 1636 aa25.44■■□□□ 1.66
CDH23-204ENST00000398792 PREX2Q70Z35 1606 aa25.41■■□□□ 1.66
CDH23-204ENST00000398792 TCOF1Q13428 1488 aaKnown RBP25.41■■□□□ 1.66
CDH23-204ENST00000398792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.41■■□□□ 1.66
CDH23-204ENST00000398792 MYO5CQ9NQX4 1742 aa25.38■■□□□ 1.65
CDH23-204ENST00000398792 ABCA9Q8IUA7 1624 aa25.37■■□□□ 1.65
CDH23-204ENST00000398792 KCNH8Q96L42 1107 aa25.37■■□□□ 1.65
CDH23-204ENST00000398792 CDC42BPBQ9Y5S2 1711 aa25.35■■□□□ 1.65
CDH23-204ENST00000398792 FAM50AQ14320 339 aaKnown RBP25.34■■□□□ 1.65
CDH23-204ENST00000398792 CAMSAP2Q08AD1 1489 aa25.31■■□□□ 1.64
CDH23-204ENST00000398792 CFDP1Q9UEE9 299 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms