RNA–Protein interactions for RNA: ENST00000398636.7

SFTPA1-201, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-201ENST00000398636 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
SFTPA1-201ENST00000398636 CLASP1Q7Z460 1538 aa16.69■□□□□ 0.26
SFTPA1-201ENST00000398636 KIAA0586Q9BVV6 1533 aa16.66■□□□□ 0.26
SFTPA1-201ENST00000398636 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
SFTPA1-201ENST00000398636 EHMT2Q96KQ7 1210 aa16.63■□□□□ 0.25
SFTPA1-201ENST00000398636 CTTNBP2Q8WZ74 1663 aa16.61■□□□□ 0.25
SFTPA1-201ENST00000398636 IQGAP2Q13576 1575 aa16.59■□□□□ 0.25
SFTPA1-201ENST00000398636 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
SFTPA1-201ENST00000398636 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.25
SFTPA1-201ENST00000398636 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
SFTPA1-201ENST00000398636 JPH4Q96JJ6 628 aa16.57■□□□□ 0.24
SFTPA1-201ENST00000398636 UGGT2Q9NYU1 1516 aa16.55■□□□□ 0.24
SFTPA1-201ENST00000398636 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
SFTPA1-201ENST00000398636 DISP1Q96F81 1524 aa16.5■□□□□ 0.23
SFTPA1-201ENST00000398636 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
SFTPA1-201ENST00000398636 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
SFTPA1-201ENST00000398636 DNAJC5Q9H3Z4 198 aa16.46■□□□□ 0.23
SFTPA1-201ENST00000398636 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
SFTPA1-201ENST00000398636 KIAA0556O60303 1618 aa16.44■□□□□ 0.22
SFTPA1-201ENST00000398636 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
SFTPA1-201ENST00000398636 CEP162Q5TB80 1403 aa16.42■□□□□ 0.22
SFTPA1-201ENST00000398636 EFCAB5A4FU69 1503 aa16.42■□□□□ 0.22
SFTPA1-201ENST00000398636 RANGAP1P46060 587 aaPredicted RBP16.42■□□□□ 0.22
SFTPA1-201ENST00000398636 CARMIL2Q6F5E8 1435 aa16.42■□□□□ 0.22
SFTPA1-201ENST00000398636 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
SFTPA1-201ENST00000398636 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
SFTPA1-201ENST00000398636 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
SFTPA1-201ENST00000398636 CLIP1P30622 1438 aa16.4■□□□□ 0.22
SFTPA1-201ENST00000398636 P3H3Q8IVL6 736 aa16.37■□□□□ 0.21
SFTPA1-201ENST00000398636 ARAP1Q96P48 1450 aa16.36■□□□□ 0.21
SFTPA1-201ENST00000398636 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
SFTPA1-201ENST00000398636 PTPRGP23470 1445 aa16.33■□□□□ 0.2
SFTPA1-201ENST00000398636 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
SFTPA1-201ENST00000398636 ABCA8O94911 1581 aa16.26■□□□□ 0.19
SFTPA1-201ENST00000398636 PLB1Q6P1J6 1458 aa16.26■□□□□ 0.19
SFTPA1-201ENST00000398636 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
SFTPA1-201ENST00000398636 TTBK1Q5TCY1 1321 aaPredicted RBP16.26■□□□□ 0.19
SFTPA1-201ENST00000398636 FMN1Q68DA7 1419 aa16.25■□□□□ 0.19
SFTPA1-201ENST00000398636 UACAQ9BZF9 1416 aa16.24■□□□□ 0.19
SFTPA1-201ENST00000398636 UHRF1BP1LA0JNW5 1464 aa16.23■□□□□ 0.19
SFTPA1-201ENST00000398636 ADCY10Q96PN6 1610 aa16.21■□□□□ 0.19
SFTPA1-201ENST00000398636 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
SFTPA1-201ENST00000398636 ABCC2Q92887 1545 aa16.21■□□□□ 0.19
SFTPA1-201ENST00000398636 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
SFTPA1-201ENST00000398636 CASKIN1Q8WXD9 1431 aa16.2■□□□□ 0.18
SFTPA1-201ENST00000398636 NUP153P49790 1475 aaKnown RBP16.19■□□□□ 0.18
SFTPA1-201ENST00000398636 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
SFTPA1-201ENST00000398636 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
SFTPA1-201ENST00000398636 KDM5BQ9UGL1 1544 aa16.16■□□□□ 0.18
SFTPA1-201ENST00000398636 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
SFTPA1-201ENST00000398636 ATP10BO94823 1461 aa16.14■□□□□ 0.17
SFTPA1-201ENST00000398636 HECW1Q76N89 1606 aa16.13■□□□□ 0.17
SFTPA1-201ENST00000398636 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
SFTPA1-201ENST00000398636 EPRSP07814 1512 aaKnown RBP16.12■□□□□ 0.17
SFTPA1-201ENST00000398636 ZCCHC11Q5TAX3 1644 aaKnown RBP16.1■□□□□ 0.17
SFTPA1-201ENST00000398636 CDK13Q14004 1512 aaKnown RBP16.09■□□□□ 0.17
SFTPA1-201ENST00000398636 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
SFTPA1-201ENST00000398636 ARID3CA6NKF2 412 aa16.07■□□□□ 0.16
SFTPA1-201ENST00000398636 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
SFTPA1-201ENST00000398636 ATP1B4Q9UN42 357 aaPredicted RBP16.07■□□□□ 0.16
SFTPA1-201ENST00000398636 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
SFTPA1-201ENST00000398636 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
SFTPA1-201ENST00000398636 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
SFTPA1-201ENST00000398636 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
SFTPA1-201ENST00000398636 MAGI3Q5TCQ9 1506 aa16.03■□□□□ 0.16
SFTPA1-201ENST00000398636 TIAM1Q13009 1591 aa16.02■□□□□ 0.16
SFTPA1-201ENST00000398636 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.15
SFTPA1-201ENST00000398636 ASXL2Q76L83 1435 aa16.01■□□□□ 0.15
SFTPA1-201ENST00000398636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
SFTPA1-201ENST00000398636 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
SFTPA1-201ENST00000398636 WDR7Q9Y4E6 1490 aa15.98■□□□□ 0.15
SFTPA1-201ENST00000398636 KANK4Q5T7N3 995 aaPredicted RBP15.98■□□□□ 0.15
SFTPA1-201ENST00000398636 PLEKHD1A6NEE1 506 aa15.96■□□□□ 0.15
SFTPA1-201ENST00000398636 TROQ12816 1431 aaPredicted RBP15.96■□□□□ 0.15
SFTPA1-201ENST00000398636 LRRC9Q6ZRR7 1453 aa15.96■□□□□ 0.15
SFTPA1-201ENST00000398636 CDK11AQ9UQ88 783 aaPredicted RBP15.95■□□□□ 0.14
SFTPA1-201ENST00000398636 ABCC10Q5T3U5 1492 aa15.93■□□□□ 0.14
SFTPA1-201ENST00000398636 EHBP1L1Q8N3D4 1523 aa15.92■□□□□ 0.14
SFTPA1-201ENST00000398636 APLP2Q06481 763 aa15.91■□□□□ 0.14
SFTPA1-201ENST00000398636 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
SFTPA1-201ENST00000398636 KIF14Q15058 1648 aa15.91■□□□□ 0.14
SFTPA1-201ENST00000398636 DIP2BQ9P265 1576 aa15.91■□□□□ 0.14
SFTPA1-201ENST00000398636 GLI2P10070 1586 aa15.9■□□□□ 0.14
SFTPA1-201ENST00000398636 KCNH8Q96L42 1107 aa15.9■□□□□ 0.14
SFTPA1-201ENST00000398636 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.13
SFTPA1-201ENST00000398636 KIF13AQ9H1H9 1805 aa15.87■□□□□ 0.13
SFTPA1-201ENST00000398636 ABCA9Q8IUA7 1624 aa15.87■□□□□ 0.13
SFTPA1-201ENST00000398636 TTC37Q6PGP7 1564 aa15.85■□□□□ 0.13
SFTPA1-201ENST00000398636 NCOA2Q15596 1464 aa15.85■□□□□ 0.13
SFTPA1-201ENST00000398636 FAM69CQ0P6D2 419 aa15.84■□□□□ 0.13
SFTPA1-201ENST00000398636 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
SFTPA1-201ENST00000398636 MAP3K4Q9Y6R4 1608 aa15.83■□□□□ 0.12
SFTPA1-201ENST00000398636 GPATCH8Q9UKJ3 1502 aaKnown RBP15.81■□□□□ 0.12
SFTPA1-201ENST00000398636 PHLDB1Q86UU1 1377 aa15.79■□□□□ 0.12
SFTPA1-201ENST00000398636 PLCH2O75038 1416 aa15.79■□□□□ 0.12
SFTPA1-201ENST00000398636 CD109Q6YHK3 1445 aa15.79■□□□□ 0.12
SFTPA1-201ENST00000398636 CDC42BPAQ5VT25 1732 aa15.79■□□□□ 0.12
SFTPA1-201ENST00000398636 PPRC1Q5VV67 1664 aaKnown RBP15.78■□□□□ 0.12
SFTPA1-201ENST00000398636 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.11
SFTPA1-201ENST00000398636 ARAP3Q8WWN8 1544 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms