RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 PLEKHG5O94827 1062 aa15.83■□□□□ 0.13
PCDHGA8-201ENST00000398604 KDM2AQ9Y2K7 1162 aa15.83■□□□□ 0.12
PCDHGA8-201ENST00000398604 GOLGA3Q08378 1498 aa15.83■□□□□ 0.12
PCDHGA8-201ENST00000398604 HIRIP3Q9BW71 556 aaPredicted RBP15.82■□□□□ 0.12
PCDHGA8-201ENST00000398604 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
PCDHGA8-201ENST00000398604 FAM9BQ8IZU0 186 aa15.81■□□□□ 0.12
PCDHGA8-201ENST00000398604 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
PCDHGA8-201ENST00000398604 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
PCDHGA8-201ENST00000398604 TONSLQ96HA7 1378 aa15.78■□□□□ 0.12
PCDHGA8-201ENST00000398604 UNC13AQ9UPW8 1703 aa15.78■□□□□ 0.12
PCDHGA8-201ENST00000398604 CUX2O14529 1486 aa15.77■□□□□ 0.11
PCDHGA8-201ENST00000398604 HNRNPUQ00839 825 aaKnown RBP eCLIP15.76■□□□□ 0.11
PCDHGA8-201ENST00000398604 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
PCDHGA8-201ENST00000398604 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
PCDHGA8-201ENST00000398604 CEP162Q5TB80 1403 aa15.75■□□□□ 0.11
PCDHGA8-201ENST00000398604 FANCD2Q9BXW9 1451 aa15.75■□□□□ 0.11
PCDHGA8-201ENST00000398604 RUSC2Q8N2Y8 1516 aa15.74■□□□□ 0.11
PCDHGA8-201ENST00000398604 TSPY4P0CV99 314 aa15.73■□□□□ 0.11
PCDHGA8-201ENST00000398604 TSPY10P0CW01 314 aa15.73■□□□□ 0.11
PCDHGA8-201ENST00000398604 CLIP1P30622 1438 aa15.72■□□□□ 0.11
PCDHGA8-201ENST00000398604 CARMIL1Q5VZK9 1371 aa15.71■□□□□ 0.11
PCDHGA8-201ENST00000398604 SENP3-EIF4A1A0A087X0R7 540 aa15.7■□□□□ 0.1
PCDHGA8-201ENST00000398604 FKBP8Q14318 412 aa15.7■□□□□ 0.1
PCDHGA8-201ENST00000398604 TNIKQ9UKE5 1360 aa15.7■□□□□ 0.1
PCDHGA8-201ENST00000398604 MIER1Q8N108 512 aa15.69■□□□□ 0.1
PCDHGA8-201ENST00000398604 A0A0G2JS52 829 aa15.68■□□□□ 0.1
PCDHGA8-201ENST00000398604 RRP7BPQ9NSQ0 103 aa15.67■□□□□ 0.1
PCDHGA8-201ENST00000398604 TMC1Q8TDI8 760 aa15.65■□□□□ 0.1
PCDHGA8-201ENST00000398604 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
PCDHGA8-201ENST00000398604 RGL3Q3MIN7 710 aa15.63■□□□□ 0.09
PCDHGA8-201ENST00000398604 CFTRP13569 1480 aa15.62■□□□□ 0.09
PCDHGA8-201ENST00000398604 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
PCDHGA8-201ENST00000398604 ZBTB7CA1YPR0 619 aa15.59■□□□□ 0.09
PCDHGA8-201ENST00000398604 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.08
PCDHGA8-201ENST00000398604 ANP32AP39687 249 aaKnown RBP15.58■□□□□ 0.08
PCDHGA8-201ENST00000398604 IRX6P78412 446 aaPredicted RBP15.57■□□□□ 0.08
PCDHGA8-201ENST00000398604 MRS2Q9HD23 443 aa15.57■□□□□ 0.08
PCDHGA8-201ENST00000398604 C14orf37Q86TY3 774 aa15.56■□□□□ 0.08
PCDHGA8-201ENST00000398604 HSP90AA1P07900 732 aaKnown RBP15.55■□□□□ 0.08
PCDHGA8-201ENST00000398604 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
PCDHGA8-201ENST00000398604 FHAD1B1AJZ9 1412 aa15.52■□□□□ 0.08
PCDHGA8-201ENST00000398604 CARMIL2Q6F5E8 1435 aa15.51■□□□□ 0.07
PCDHGA8-201ENST00000398604 WDR43Q15061 677 aaKnown RBP eCLIP15.51■□□□□ 0.07
PCDHGA8-201ENST00000398604 PPP1R15AO75807 674 aaPredicted RBP15.5■□□□□ 0.07
PCDHGA8-201ENST00000398604 CCDC136Q96JN2 1154 aa15.49■□□□□ 0.07
PCDHGA8-201ENST00000398604 SYNJ1O43426 1573 aa15.48■□□□□ 0.07
PCDHGA8-201ENST00000398604 RAPGEF2Q9Y4G8 1499 aa15.48■□□□□ 0.07
PCDHGA8-201ENST00000398604 ARID4BQ4LE39 1312 aaPredicted RBP15.48■□□□□ 0.07
PCDHGA8-201ENST00000398604 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
PCDHGA8-201ENST00000398604 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.07
PCDHGA8-201ENST00000398604 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.07
PCDHGA8-201ENST00000398604 ARXQ96QS3 562 aa15.44■□□□□ 0.06
PCDHGA8-201ENST00000398604 PPM1GO15355 546 aaPredicted RBP15.44■□□□□ 0.06
PCDHGA8-201ENST00000398604 EIF4G2P78344 907 aaKnown RBP eCLIP15.43■□□□□ 0.06
PCDHGA8-201ENST00000398604 CFDP1Q9UEE9 299 aaPredicted RBP15.42■□□□□ 0.06
PCDHGA8-201ENST00000398604 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.41■□□□□ 0.06
PCDHGA8-201ENST00000398604 UPF2Q9HAU5 1272 aaKnown RBP15.41■□□□□ 0.06
PCDHGA8-201ENST00000398604 GAPVD1Q14C86 1478 aa15.41■□□□□ 0.06
PCDHGA8-201ENST00000398604 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
PCDHGA8-201ENST00000398604 NESP48681 1621 aa15.39■□□□□ 0.05
PCDHGA8-201ENST00000398604 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
PCDHGA8-201ENST00000398604 NEUROD2Q15784 382 aa15.37■□□□□ 0.05
PCDHGA8-201ENST00000398604 FMN1Q68DA7 1419 aa15.37■□□□□ 0.05
PCDHGA8-201ENST00000398604 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
PCDHGA8-201ENST00000398604 NBR1Q14596 966 aa15.34■□□□□ 0.05
PCDHGA8-201ENST00000398604 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
PCDHGA8-201ENST00000398604 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
PCDHGA8-201ENST00000398604 HAP1P54257 671 aaPredicted RBP15.34■□□□□ 0.05
PCDHGA8-201ENST00000398604 TOPBP1Q92547 1522 aa15.33■□□□□ 0.04
PCDHGA8-201ENST00000398604 IGF1RP08069 1367 aa15.33■□□□□ 0.04
PCDHGA8-201ENST00000398604 TNNT2P45379 298 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA8-201ENST00000398604 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
PCDHGA8-201ENST00000398604 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
PCDHGA8-201ENST00000398604 JPH4Q96JJ6 628 aa15.31■□□□□ 0.04
PCDHGA8-201ENST00000398604 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
PCDHGA8-201ENST00000398604 MLECQ14165 292 aa15.31■□□□□ 0.04
PCDHGA8-201ENST00000398604 EIF5BO60841 1220 aaKnown RBP15.3■□□□□ 0.04
PCDHGA8-201ENST00000398604 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
PCDHGA8-201ENST00000398604 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
PCDHGA8-201ENST00000398604 KANK4Q5T7N3 995 aaPredicted RBP15.28■□□□□ 0.04
PCDHGA8-201ENST00000398604 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
PCDHGA8-201ENST00000398604 CARD11Q9BXL7 1154 aa15.28■□□□□ 0.04
PCDHGA8-201ENST00000398604 KIF21BO75037 1637 aa15.26■□□□□ 0.03
PCDHGA8-201ENST00000398604 ANP32BQ92688 251 aaKnown RBP15.26■□□□□ 0.03
PCDHGA8-201ENST00000398604 SOX12O15370 315 aa15.24■□□□□ 0.03
PCDHGA8-201ENST00000398604 KNSTRNQ9Y448 316 aa15.24■□□□□ 0.03
PCDHGA8-201ENST00000398604 LAS1LQ9Y4W2 734 aaKnown RBP15.24■□□□□ 0.03
PCDHGA8-201ENST00000398604 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
PCDHGA8-201ENST00000398604 POLA1P09884 1462 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA8-201ENST00000398604 CUX1P39880 1505 aa15.23■□□□□ 0.03
PCDHGA8-201ENST00000398604 POGKQ9P215 609 aa15.23■□□□□ 0.03
PCDHGA8-201ENST00000398604 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.03
PCDHGA8-201ENST00000398604 MYH16Q9H6N6 1097 aa15.23■□□□□ 0.03
PCDHGA8-201ENST00000398604 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
PCDHGA8-201ENST00000398604 SUPT16HQ9Y5B9 1047 aaKnown RBP15.18■□□□□ 0.02
PCDHGA8-201ENST00000398604 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
PCDHGA8-201ENST00000398604 CC2D1BQ5T0F9 858 aaKnown RBP15.17■□□□□ 0.02
PCDHGA8-201ENST00000398604 PTPRGP23470 1445 aa15.17■□□□□ 0.02
PCDHGA8-201ENST00000398604 TPRNQ4KMQ1 711 aa15.16■□□□□ 0.02
PCDHGA8-201ENST00000398604 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms