RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 HRCP23327 699 aa16.62■□□□□ 0.25
MSL3-207ENST00000398527 PODXL2Q9NZ53 605 aa16.62■□□□□ 0.25
MSL3-207ENST00000398527 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
MSL3-207ENST00000398527 SOGA1O94964 1423 aa16.57■□□□□ 0.24
MSL3-207ENST00000398527 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
MSL3-207ENST00000398527 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
MSL3-207ENST00000398527 KIF13AQ9H1H9 1805 aa16.51■□□□□ 0.23
MSL3-207ENST00000398527 UBE2Q2Q8WVN8 375 aa16.51■□□□□ 0.23
MSL3-207ENST00000398527 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
MSL3-207ENST00000398527 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
MSL3-207ENST00000398527 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
MSL3-207ENST00000398527 KDM4FA0A1W2PPD8 638 aa16.46■□□□□ 0.23
MSL3-207ENST00000398527 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
MSL3-207ENST00000398527 TULP1O00294 542 aaPredicted RBP16.45■□□□□ 0.22
MSL3-207ENST00000398527 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
MSL3-207ENST00000398527 PCGF6Q9BYE7 350 aa16.42■□□□□ 0.22
MSL3-207ENST00000398527 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
MSL3-207ENST00000398527 HOMEZQ8IX15 550 aa16.39■□□□□ 0.21
MSL3-207ENST00000398527 CEP170Q5SW79 1584 aa16.39■□□□□ 0.21
MSL3-207ENST00000398527 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
MSL3-207ENST00000398527 CUX1P39880 1505 aa16.35■□□□□ 0.21
MSL3-207ENST00000398527 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
MSL3-207ENST00000398527 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.2
MSL3-207ENST00000398527 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
MSL3-207ENST00000398527 KDM6BO15054 1643 aa16.32■□□□□ 0.2
MSL3-207ENST00000398527 NUP160Q12769 1436 aa16.31■□□□□ 0.2
MSL3-207ENST00000398527 ABCA5Q8WWZ7 1642 aa16.31■□□□□ 0.2
MSL3-207ENST00000398527 FAM69CQ0P6D2 419 aa16.3■□□□□ 0.2
MSL3-207ENST00000398527 DIP2BQ9P265 1576 aa16.27■□□□□ 0.2
MSL3-207ENST00000398527 MAPKBP1O60336 1514 aa16.25■□□□□ 0.19
MSL3-207ENST00000398527 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
MSL3-207ENST00000398527 ADAMTS12P58397 1594 aa16.24■□□□□ 0.19
MSL3-207ENST00000398527 HECW2Q9P2P5 1572 aa16.19■□□□□ 0.18
MSL3-207ENST00000398527 PRG4Q92954 1404 aaPredicted RBP16.19■□□□□ 0.18
MSL3-207ENST00000398527 PKNOX2Q96KN3 472 aa16.18■□□□□ 0.18
MSL3-207ENST00000398527 PDIA4P13667 645 aaKnown RBP16.18■□□□□ 0.18
MSL3-207ENST00000398527 EEA1Q15075 1411 aa16.18■□□□□ 0.18
MSL3-207ENST00000398527 ADGRL1O94910 1474 aa16.17■□□□□ 0.18
MSL3-207ENST00000398527 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
MSL3-207ENST00000398527 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
MSL3-207ENST00000398527 TSPOAP1O95153 1857 aa16.15■□□□□ 0.18
MSL3-207ENST00000398527 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
MSL3-207ENST00000398527 ADCY10Q96PN6 1610 aa16.13■□□□□ 0.17
MSL3-207ENST00000398527 FBXO41Q8TF61 875 aa16.1■□□□□ 0.17
MSL3-207ENST00000398527 JPH4Q96JJ6 628 aa16.09■□□□□ 0.17
MSL3-207ENST00000398527 ANO8Q9HCE9 1232 aaPredicted RBP16.08■□□□□ 0.16
MSL3-207ENST00000398527 TAOK2Q9UL54 1235 aa16.08■□□□□ 0.16
MSL3-207ENST00000398527 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
MSL3-207ENST00000398527 ANP32EQ9BTT0 268 aa16.06■□□□□ 0.16
MSL3-207ENST00000398527 ERICH3Q5RHP9 1530 aa16.04■□□□□ 0.16
MSL3-207ENST00000398527 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.16
MSL3-207ENST00000398527 KCNA4P22459 653 aa16.02■□□□□ 0.16
MSL3-207ENST00000398527 PDE4CQ08493 712 aa16■□□□□ 0.15
MSL3-207ENST00000398527 PPRC1Q5VV67 1664 aaKnown RBP16■□□□□ 0.15
MSL3-207ENST00000398527 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
MSL3-207ENST00000398527 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
MSL3-207ENST00000398527 NEFLP07196 543 aa15.96■□□□□ 0.15
MSL3-207ENST00000398527 GLI2P10070 1586 aa15.96■□□□□ 0.15
MSL3-207ENST00000398527 PPARGC1BQ86YN6 1023 aaKnown RBP15.94■□□□□ 0.14
MSL3-207ENST00000398527 COL17A1Q9UMD9 1497 aaPredicted RBP15.92■□□□□ 0.14
MSL3-207ENST00000398527 KIF21BO75037 1637 aa15.91■□□□□ 0.14
MSL3-207ENST00000398527 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
MSL3-207ENST00000398527 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
MSL3-207ENST00000398527 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
MSL3-207ENST00000398527 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
MSL3-207ENST00000398527 PLB1Q6P1J6 1458 aa15.89■□□□□ 0.13
MSL3-207ENST00000398527 LMTK3Q96Q04 1460 aa15.89■□□□□ 0.13
MSL3-207ENST00000398527 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
MSL3-207ENST00000398527 ASXL2Q76L83 1435 aa15.87■□□□□ 0.13
MSL3-207ENST00000398527 ABCC2Q92887 1545 aa15.87■□□□□ 0.13
MSL3-207ENST00000398527 KIAA0586Q9BVV6 1533 aa15.85■□□□□ 0.13
MSL3-207ENST00000398527 MAP3K4Q9Y6R4 1608 aa15.83■□□□□ 0.13
MSL3-207ENST00000398527 TEX14Q8IWB6 1497 aa15.83■□□□□ 0.13
MSL3-207ENST00000398527 PTPRGP23470 1445 aa15.83■□□□□ 0.12
MSL3-207ENST00000398527 TPRNQ4KMQ1 711 aa15.83■□□□□ 0.12
MSL3-207ENST00000398527 C14orf37Q86TY3 774 aa15.81■□□□□ 0.12
MSL3-207ENST00000398527 CUL7Q14999 1698 aa15.8■□□□□ 0.12
MSL3-207ENST00000398527 EPRSP07814 1512 aaKnown RBP15.79■□□□□ 0.12
MSL3-207ENST00000398527 UHRF1BP1LA0JNW5 1464 aa15.77■□□□□ 0.12
MSL3-207ENST00000398527 SOCS7O14512 581 aa15.75■□□□□ 0.11
MSL3-207ENST00000398527 GTF3C3Q9Y5Q9 886 aa15.74■□□□□ 0.11
MSL3-207ENST00000398527 TAF7LQ5H9L4 462 aa15.73■□□□□ 0.11
MSL3-207ENST00000398527 CHMP4AQ9BY43 222 aa15.71■□□□□ 0.11
MSL3-207ENST00000398527 CARMIL2Q6F5E8 1435 aa15.71■□□□□ 0.1
MSL3-207ENST00000398527 BCL11BQ9C0K0 894 aaPredicted RBP15.71■□□□□ 0.1
MSL3-207ENST00000398527 KDM5BQ9UGL1 1544 aa15.69■□□□□ 0.1
MSL3-207ENST00000398527 UACAQ9BZF9 1416 aa15.69■□□□□ 0.1
MSL3-207ENST00000398527 UBTFP17480 764 aaKnown RBP15.69■□□□□ 0.1
MSL3-207ENST00000398527 ILDR2Q71H61 639 aa15.69■□□□□ 0.1
MSL3-207ENST00000398527 FGD1P98174 961 aa15.67■□□□□ 0.1
MSL3-207ENST00000398527 ZCCHC11Q5TAX3 1644 aaKnown RBP15.66■□□□□ 0.1
MSL3-207ENST00000398527 PTPRMP28827 1452 aa15.66■□□□□ 0.1
MSL3-207ENST00000398527 HAP1P54257 671 aaPredicted RBP15.66■□□□□ 0.1
MSL3-207ENST00000398527 BCANQ96GW7 911 aa15.65■□□□□ 0.1
MSL3-207ENST00000398527 DISP3Q9P2K9 1392 aa15.64■□□□□ 0.09
MSL3-207ENST00000398527 ACIN1Q9UKV3 1341 aaKnown RBP15.64■□□□□ 0.09
MSL3-207ENST00000398527 PCF11O94913 1555 aaKnown RBP15.64■□□□□ 0.09
MSL3-207ENST00000398527 MAGI3Q5TCQ9 1506 aa15.63■□□□□ 0.09
MSL3-207ENST00000398527 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
MSL3-207ENST00000398527 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms