RNA–Protein interactions for RNA: ENST00000398225.7

PDE9A-208, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-208ENST00000398225 GOLGA3Q08378 1498 aa24.02■■□□□ 1.44
PDE9A-208ENST00000398225 LOC105371045A0A1W2PR82 267 aa23.99■■□□□ 1.43
PDE9A-208ENST00000398225 UBTFP17480 764 aaKnown RBP23.99■■□□□ 1.43
PDE9A-208ENST00000398225 KIAA0586Q9BVV6 1533 aa23.98■■□□□ 1.43
PDE9A-208ENST00000398225 IQGAP2Q13576 1575 aa23.95■■□□□ 1.42
PDE9A-208ENST00000398225 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
PDE9A-208ENST00000398225 JPH4Q96JJ6 628 aa23.91■■□□□ 1.42
PDE9A-208ENST00000398225 SHROOM2Q13796 1616 aa23.89■■□□□ 1.42
PDE9A-208ENST00000398225 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
PDE9A-208ENST00000398225 DNAJC5Q9H3Z4 198 aa23.84■■□□□ 1.41
PDE9A-208ENST00000398225 PRG4Q92954 1404 aaPredicted RBP23.82■■□□□ 1.4
PDE9A-208ENST00000398225 ARHGEF11O15085 1522 aa23.8■■□□□ 1.4
PDE9A-208ENST00000398225 UGGT2Q9NYU1 1516 aa23.79■■□□□ 1.4
PDE9A-208ENST00000398225 RIMBP3CA6NJZ7 1639 aa23.79■■□□□ 1.4
PDE9A-208ENST00000398225 RIMBP3BA6NNM3 1639 aa23.79■■□□□ 1.4
PDE9A-208ENST00000398225 RIMBP3Q9UFD9 1639 aa23.79■■□□□ 1.4
PDE9A-208ENST00000398225 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
PDE9A-208ENST00000398225 DISP1Q96F81 1524 aa23.76■■□□□ 1.39
PDE9A-208ENST00000398225 P3H3Q8IVL6 736 aa23.74■■□□□ 1.39
PDE9A-208ENST00000398225 KIAA0556O60303 1618 aa23.72■■□□□ 1.39
PDE9A-208ENST00000398225 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
PDE9A-208ENST00000398225 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
PDE9A-208ENST00000398225 CARMIL2Q6F5E8 1435 aa23.69■■□□□ 1.38
PDE9A-208ENST00000398225 ARAP1Q96P48 1450 aa23.65■■□□□ 1.38
PDE9A-208ENST00000398225 ARHGAP35Q9NRY4 1499 aa23.64■■□□□ 1.38
PDE9A-208ENST00000398225 CEP162Q5TB80 1403 aa23.64■■□□□ 1.37
PDE9A-208ENST00000398225 CLIP1P30622 1438 aa23.62■■□□□ 1.37
PDE9A-208ENST00000398225 FHOD3Q2V2M9 1422 aa23.62■■□□□ 1.37
PDE9A-208ENST00000398225 EFCAB5A4FU69 1503 aa23.61■■□□□ 1.37
PDE9A-208ENST00000398225 CYB5RLQ6IPT4 315 aa23.61■■□□□ 1.37
PDE9A-208ENST00000398225 PTPRGP23470 1445 aa23.57■■□□□ 1.36
PDE9A-208ENST00000398225 PLB1Q6P1J6 1458 aa23.48■■□□□ 1.35
PDE9A-208ENST00000398225 ADCY10Q96PN6 1610 aa23.44■■□□□ 1.34
PDE9A-208ENST00000398225 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
PDE9A-208ENST00000398225 ABCA8O94911 1581 aa23.41■■□□□ 1.34
PDE9A-208ENST00000398225 RAPGEF6Q8TEU7 1601 aa23.4■■□□□ 1.34
PDE9A-208ENST00000398225 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
PDE9A-208ENST00000398225 ARID3CA6NKF2 412 aa23.38■■□□□ 1.33
PDE9A-208ENST00000398225 ABCC2Q92887 1545 aa23.37■■□□□ 1.33
PDE9A-208ENST00000398225 ATP1B4Q9UN42 357 aaPredicted RBP23.37■■□□□ 1.33
PDE9A-208ENST00000398225 PCF11O94913 1555 aaKnown RBP23.36■■□□□ 1.33
PDE9A-208ENST00000398225 UHRF1BP1LA0JNW5 1464 aa23.33■■□□□ 1.33
PDE9A-208ENST00000398225 LRRIQ1Q96JM4 1722 aa23.32■■□□□ 1.32
PDE9A-208ENST00000398225 NUP153P49790 1475 aaKnown RBP23.31■■□□□ 1.32
PDE9A-208ENST00000398225 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
PDE9A-208ENST00000398225 ZCCHC11Q5TAX3 1644 aaKnown RBP23.28■■□□□ 1.32
PDE9A-208ENST00000398225 HECW1Q76N89 1606 aa23.28■■□□□ 1.32
PDE9A-208ENST00000398225 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
PDE9A-208ENST00000398225 KDM5BQ9UGL1 1544 aa23.25■■□□□ 1.31
PDE9A-208ENST00000398225 ATP10BO94823 1461 aa23.25■■□□□ 1.31
PDE9A-208ENST00000398225 FYCO1Q9BQS8 1478 aa23.25■■□□□ 1.31
PDE9A-208ENST00000398225 NPM1P06748 294 aaKnown RBP eCLIP23.25■■□□□ 1.31
PDE9A-208ENST00000398225 CDK13Q14004 1512 aaKnown RBP23.25■■□□□ 1.31
PDE9A-208ENST00000398225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.23■■□□□ 1.31
PDE9A-208ENST00000398225 HNRNPUL2Q1KMD3 747 aaKnown RBP23.23■■□□□ 1.31
PDE9A-208ENST00000398225 EPRSP07814 1512 aaKnown RBP23.22■■□□□ 1.31
PDE9A-208ENST00000398225 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
PDE9A-208ENST00000398225 CCDC18Q5T9S5 1454 aa23.13■■□□□ 1.29
PDE9A-208ENST00000398225 MAPKBP1O60336 1514 aa23.12■■□□□ 1.29
PDE9A-208ENST00000398225 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.29
PDE9A-208ENST00000398225 MAGI3Q5TCQ9 1506 aa23.07■■□□□ 1.28
PDE9A-208ENST00000398225 TIAM1Q13009 1591 aa23.07■■□□□ 1.28
PDE9A-208ENST00000398225 PLEKHD1A6NEE1 506 aa23.07■■□□□ 1.28
PDE9A-208ENST00000398225 KCNH8Q96L42 1107 aa23.07■■□□□ 1.28
PDE9A-208ENST00000398225 WDR7Q9Y4E6 1490 aa23.06■■□□□ 1.28
PDE9A-208ENST00000398225 APLP2Q06481 763 aa23.02■■□□□ 1.28
PDE9A-208ENST00000398225 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
PDE9A-208ENST00000398225 KIF13AQ9H1H9 1805 aa23.02■■□□□ 1.28
PDE9A-208ENST00000398225 KANK4Q5T7N3 995 aaPredicted RBP23.01■■□□□ 1.27
PDE9A-208ENST00000398225 DIP2BQ9P265 1576 aa22.99■■□□□ 1.27
PDE9A-208ENST00000398225 TRHP20396 242 aaPredicted RBP22.99■■□□□ 1.27
PDE9A-208ENST00000398225 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
PDE9A-208ENST00000398225 KIF14Q15058 1648 aa22.98■■□□□ 1.27
PDE9A-208ENST00000398225 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
PDE9A-208ENST00000398225 MAP3K1Q13233 1512 aa22.98■■□□□ 1.27
PDE9A-208ENST00000398225 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
PDE9A-208ENST00000398225 ABCC10Q5T3U5 1492 aa22.97■■□□□ 1.27
PDE9A-208ENST00000398225 FAM69CQ0P6D2 419 aa22.97■■□□□ 1.27
PDE9A-208ENST00000398225 LRRC9Q6ZRR7 1453 aa22.95■■□□□ 1.26
PDE9A-208ENST00000398225 EHBP1L1Q8N3D4 1523 aa22.93■■□□□ 1.26
PDE9A-208ENST00000398225 TSPOAP1O95153 1857 aa22.92■■□□□ 1.26
PDE9A-208ENST00000398225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.91■■□□□ 1.26
PDE9A-208ENST00000398225 TTC37Q6PGP7 1564 aa22.91■■□□□ 1.26
PDE9A-208ENST00000398225 GLI2P10070 1586 aa22.88■■□□□ 1.25
PDE9A-208ENST00000398225 ABCA9Q8IUA7 1624 aa22.88■■□□□ 1.25
PDE9A-208ENST00000398225 SUPT6HQ7KZ85 1726 aaKnown RBP22.87■■□□□ 1.25
PDE9A-208ENST00000398225 MAP3K4Q9Y6R4 1608 aa22.86■■□□□ 1.25
PDE9A-208ENST00000398225 NCOA2Q15596 1464 aa22.82■■□□□ 1.24
PDE9A-208ENST00000398225 CD109Q6YHK3 1445 aa22.82■■□□□ 1.24
PDE9A-208ENST00000398225 CDC42BPAQ5VT25 1732 aa22.82■■□□□ 1.24
PDE9A-208ENST00000398225 MYO5CQ9NQX4 1742 aa22.81■■□□□ 1.24
PDE9A-208ENST00000398225 PPRC1Q5VV67 1664 aaKnown RBP22.81■■□□□ 1.24
PDE9A-208ENST00000398225 CDC42BPBQ9Y5S2 1711 aa22.79■■□□□ 1.24
PDE9A-208ENST00000398225 CCNB3Q8WWL7 1395 aa22.75■■□□□ 1.23
PDE9A-208ENST00000398225 GPATCH8Q9UKJ3 1502 aaKnown RBP22.74■■□□□ 1.23
PDE9A-208ENST00000398225 PREX2Q70Z35 1606 aa22.74■■□□□ 1.23
PDE9A-208ENST00000398225 PHLDB1Q86UU1 1377 aa22.73■■□□□ 1.23
PDE9A-208ENST00000398225 PLCH2O75038 1416 aa22.73■■□□□ 1.23
PDE9A-208ENST00000398225 ITSN2Q9NZM3 1697 aa22.71■■□□□ 1.23
PDE9A-208ENST00000398225 ARHGAP5Q13017 1502 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms