RNA–Protein interactions for RNA: ENST00000398148.7

KHSRP-201, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KHSRP, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-201ENST00000398148 ANP32CO43423 234 aa33.45■■■□□ 2.95
KHSRP-201ENST00000398148 MAPKBP1O60336 1514 aa33.43■■■□□ 2.94
KHSRP-201ENST00000398148 KIF27Q86VH2 1401 aa33.42■■■□□ 2.94
KHSRP-201ENST00000398148 PPP1R15AO75807 674 aaPredicted RBP33.4■■■□□ 2.94
KHSRP-201ENST00000398148 PHLDB1Q86UU1 1377 aa33.38■■■□□ 2.93
KHSRP-201ENST00000398148 SETD5Q9C0A6 1442 aa33.38■■■□□ 2.93
KHSRP-201ENST00000398148 CUX1P39880 1505 aa33.33■■■□□ 2.93
KHSRP-201ENST00000398148 ERICH3Q5RHP9 1530 aa33.31■■■□□ 2.92
KHSRP-201ENST00000398148 HNRNPUQ00839 825 aaKnown RBP eCLIP33.28■■■□□ 2.92
KHSRP-201ENST00000398148 CNGB1Q14028 1251 aaPredicted RBP33.27■■■□□ 2.92
KHSRP-201ENST00000398148 MSH5O43196 834 aa33.23■■■□□ 2.91
KHSRP-201ENST00000398148 CUX2O14529 1486 aa33.22■■■□□ 2.91
KHSRP-201ENST00000398148 BIVM-ERCC5R4GMW8 1640 aa33.16■■■□□ 2.9
KHSRP-201ENST00000398148 SENP3-EIF4A1A0A087X0R7 540 aa33.13■■■□□ 2.89
KHSRP-201ENST00000398148 IGF1RP08069 1367 aa33.13■■■□□ 2.89
KHSRP-201ENST00000398148 TONSLQ96HA7 1378 aa33.12■■■□□ 2.89
KHSRP-201ENST00000398148 CARMIL1Q5VZK9 1371 aa33.08■■■□□ 2.89
KHSRP-201ENST00000398148 LRRC9Q6ZRR7 1453 aa33.07■■■□□ 2.88
KHSRP-201ENST00000398148 CCER2I3L3R5 266 aa33.04■■■□□ 2.88
KHSRP-201ENST00000398148 ERICH6Q7L0X2 663 aa33.04■■■□□ 2.88
KHSRP-201ENST00000398148 TIAM1Q13009 1591 aa33.03■■■□□ 2.88
KHSRP-201ENST00000398148 CHIC2Q9UKJ5 165 aa33.02■■■□□ 2.88
KHSRP-201ENST00000398148 FHOD3Q2V2M9 1422 aa33.02■■■□□ 2.88
KHSRP-201ENST00000398148 CCDC184Q52MB2 194 aa32.99■■■□□ 2.87
KHSRP-201ENST00000398148 FAM9BQ8IZU0 186 aa32.97■■■□□ 2.87
KHSRP-201ENST00000398148 CDK11AQ9UQ88 783 aaPredicted RBP32.96■■■□□ 2.87
KHSRP-201ENST00000398148 ARID3CA6NKF2 412 aa32.94■■■□□ 2.86
KHSRP-201ENST00000398148 RRP7BPQ9NSQ0 103 aa32.92■■■□□ 2.86
KHSRP-201ENST00000398148 B4GALNT3Q6L9W6 998 aa32.89■■■□□ 2.86
KHSRP-201ENST00000398148 FOXD1Q16676 465 aa32.87■■■□□ 2.85
KHSRP-201ENST00000398148 HSPA5P11021 654 aaKnown RBP32.82■■■□□ 2.84
KHSRP-201ENST00000398148 CFTRP13569 1480 aa32.79■■■□□ 2.84
KHSRP-201ENST00000398148 POLR3GLQ9BT43 218 aa32.78■■■□□ 2.84
KHSRP-201ENST00000398148 TIMELESSQ9UNS1 1208 aa32.77■■■□□ 2.84
KHSRP-201ENST00000398148 PCF11O94913 1555 aaKnown RBP32.77■■■□□ 2.84
KHSRP-201ENST00000398148 WASHC2AQ641Q2 1341 aa32.76■■■□□ 2.84
KHSRP-201ENST00000398148 NCAPD3P42695 1498 aa32.76■■■□□ 2.83
KHSRP-201ENST00000398148 PTPRKQ15262 1439 aa32.74■■■□□ 2.83
KHSRP-201ENST00000398148 FGD5Q6ZNL6 1462 aa32.73■■■□□ 2.83
KHSRP-201ENST00000398148 MTUS2Q5JR59 1369 aa32.73■■■□□ 2.83
KHSRP-201ENST00000398148 FHAD1B1AJZ9 1412 aa32.72■■■□□ 2.83
KHSRP-201ENST00000398148 CCDC18Q5T9S5 1454 aa32.7■■■□□ 2.82
KHSRP-201ENST00000398148 NBR1Q14596 966 aa32.68■■■□□ 2.82
KHSRP-201ENST00000398148 AQRO60306 1485 aaKnown RBP eCLIP32.67■■■□□ 2.821e-7■■■■□ 21.5
KHSRP-201ENST00000398148 C11orf95C9JLR9 678 aaPredicted RBP32.67■■■□□ 2.82
KHSRP-201ENST00000398148 MRS2Q9HD23 443 aa32.67■■■□□ 2.82
KHSRP-201ENST00000398148 RAD54L2Q9Y4B4 1467 aa32.64■■■□□ 2.82
KHSRP-201ENST00000398148 FGD6Q6ZV73 1430 aa32.6■■■□□ 2.81
KHSRP-201ENST00000398148 HMGXB3Q12766 1538 aa32.57■■■□□ 2.81
KHSRP-201ENST00000398148 EIF4G2P78344 907 aaKnown RBP eCLIP32.56■■■□□ 2.8
KHSRP-201ENST00000398148 PPP4R2Q9NY27 417 aa32.55■■■□□ 2.8
KHSRP-201ENST00000398148 FANCIQ9NVI1 1328 aa32.54■■■□□ 2.8
KHSRP-201ENST00000398148 MAP3K1Q13233 1512 aa32.53■■■□□ 2.8
KHSRP-201ENST00000398148 L3MBTL2Q969R5 705 aa32.52■■■□□ 2.8
KHSRP-201ENST00000398148 ZNF326Q5BKZ1 582 aaKnown RBP32.51■■■□□ 2.79
KHSRP-201ENST00000398148 CADPSQ9ULU8 1353 aa32.48■■■□□ 2.79
KHSRP-201ENST00000398148 UACAQ9BZF9 1416 aa32.48■■■□□ 2.79
KHSRP-201ENST00000398148 PRKRIP1Q9H875 184 aaPredicted RBP32.45■■■□□ 2.79
KHSRP-201ENST00000398148 NAIPQ13075 1403 aa32.45■■■□□ 2.78
KHSRP-201ENST00000398148 PAK3O75914 559 aaPredicted RBP32.44■■■□□ 2.78
KHSRP-201ENST00000398148 DEKP35659 375 aaKnown RBP32.43■■■□□ 2.78
KHSRP-201ENST00000398148 CASKIN1Q8WXD9 1431 aa32.41■■■□□ 2.78
KHSRP-201ENST00000398148 HFM1A2PYH4 1435 aa32.39■■■□□ 2.78
KHSRP-201ENST00000398148 CFAP43Q8NDM7 1665 aa32.38■■■□□ 2.77
KHSRP-201ENST00000398148 TDRD9Q8NDG6 1382 aaKnown RBP32.37■■■□□ 2.77
KHSRP-201ENST00000398148 NBPF8Q3BBV2 869 aa32.37■■■□□ 2.77
KHSRP-201ENST00000398148 MPHOSPH9Q99550 1183 aa32.37■■■□□ 2.77
KHSRP-201ENST00000398148 FYCO1Q9BQS8 1478 aa32.35■■■□□ 2.77
KHSRP-201ENST00000398148 PTPN23Q9H3S7 1636 aa32.33■■■□□ 2.77
KHSRP-201ENST00000398148 SALL2Q9Y467 1007 aaPredicted RBP32.32■■■□□ 2.76
KHSRP-201ENST00000398148 NCOA2Q15596 1464 aa32.32■■■□□ 2.76
KHSRP-201ENST00000398148 FMN1Q68DA7 1419 aa32.29■■■□□ 2.76
KHSRP-201ENST00000398148 AKNAQ7Z591 1439 aa32.28■■■□□ 2.76
KHSRP-201ENST00000398148 NPM2Q86SE8 214 aaKnown RBP32.25■■■□□ 2.75
KHSRP-201ENST00000398148 CCDC136Q96JN2 1154 aa32.25■■■□□ 2.75
KHSRP-201ENST00000398148 FANCD2Q9BXW9 1451 aa32.24■■■□□ 2.75
KHSRP-201ENST00000398148 KDM5BQ9UGL1 1544 aa32.24■■■□□ 2.75
KHSRP-201ENST00000398148 NOP58Q9Y2X3 529 aaKnown RBP32.24■■■□□ 2.75
KHSRP-201ENST00000398148 MYOM3Q5VTT5 1437 aa32.24■■■□□ 2.75
KHSRP-201ENST00000398148 CNTLNQ9NXG0 1405 aa32.24■■■□□ 2.75
KHSRP-201ENST00000398148 CCDC7Q96M83 1385 aa32.23■■■□□ 2.75
KHSRP-201ENST00000398148 KIF7Q2M1P5 1343 aa32.22■■■□□ 2.75
KHSRP-201ENST00000398148 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.21■■■□□ 2.759e-6■□□□□ 9.6
KHSRP-201ENST00000398148 NESP48681 1621 aa32.2■■■□□ 2.74
KHSRP-201ENST00000398148 ZBED9Q6R2W3 1325 aa32.18■■■□□ 2.74
KHSRP-201ENST00000398148 SLC4A1APQ9BWU0 796 aaKnown RBP32.17■■■□□ 2.74
KHSRP-201ENST00000398148 ZNF644Q9H582 1327 aaPredicted RBP32.16■■■□□ 2.74
KHSRP-201ENST00000398148 POLA1P09884 1462 aaPredicted RBP32.15■■■□□ 2.74
KHSRP-201ENST00000398148 KDM6BO15054 1643 aa32.14■■■□□ 2.74
KHSRP-201ENST00000398148 SNAPC4Q5SXM2 1469 aa32.14■■■□□ 2.74
KHSRP-201ENST00000398148 DENND4BO75064 1496 aaPredicted RBP32.13■■■□□ 2.73
KHSRP-201ENST00000398148 ERICH6BQ5W0A0 696 aa32.05■■■□□ 2.72
KHSRP-201ENST00000398148 ZNF777Q9ULD5 760 aaPredicted RBP32.04■■■□□ 2.72
KHSRP-201ENST00000398148 EFCAB5A4FU69 1503 aa32.03■■■□□ 2.72
KHSRP-201ENST00000398148 ANP32AP39687 249 aaKnown RBP32.01■■■□□ 2.72
KHSRP-201ENST00000398148 NCOA1Q15788 1441 aa32.01■■■□□ 2.71
KHSRP-201ENST00000398148 RTN4Q9NQC3 1192 aaKnown RBP32.01■■■□□ 2.71
KHSRP-201ENST00000398148 MAGI3Q5TCQ9 1506 aa32■■■□□ 2.71
KHSRP-201ENST00000398148 TOPBP1Q92547 1522 aa32■■■□□ 2.71
KHSRP-201ENST00000398148 TMC1Q8TDI8 760 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms