RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 KIAA0586Q9BVV6 1533 aa28.45■■■□□ 2.15
APTR-201ENST00000398043 JPH4Q96JJ6 628 aa28.42■■■□□ 2.14
APTR-201ENST00000398043 PRG4Q92954 1404 aaPredicted RBP28.39■■■□□ 2.14
APTR-201ENST00000398043 RAPGEF2Q9Y4G8 1499 aa28.38■■■□□ 2.13
APTR-201ENST00000398043 PRXQ9BXM0 1461 aa28.29■■■□□ 2.12
APTR-201ENST00000398043 IQGAP2Q13576 1575 aa28.28■■■□□ 2.12
APTR-201ENST00000398043 CTTNBP2Q8WZ74 1663 aa28.23■■■□□ 2.11
APTR-201ENST00000398043 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
APTR-201ENST00000398043 EEA1Q15075 1411 aa28.17■■■□□ 2.1
APTR-201ENST00000398043 UGGT2Q9NYU1 1516 aa28.15■■■□□ 2.1
APTR-201ENST00000398043 CSRNP3Q8WYN3 585 aa28.14■■■□□ 2.1
APTR-201ENST00000398043 DISP1Q96F81 1524 aa28.13■■■□□ 2.09
APTR-201ENST00000398043 ADCY10Q96PN6 1610 aa28.08■■■□□ 2.09
APTR-201ENST00000398043 CARMIL2Q6F5E8 1435 aa28.07■■■□□ 2.08
APTR-201ENST00000398043 KIAA0556O60303 1618 aa28.03■■■□□ 2.08
APTR-201ENST00000398043 TNIKQ9UKE5 1360 aa28.03■■■□□ 2.08
APTR-201ENST00000398043 PTPRGP23470 1445 aa28.01■■■□□ 2.07
APTR-201ENST00000398043 KIF21BO75037 1637 aa27.97■■■□□ 2.07
APTR-201ENST00000398043 TRHP20396 242 aaPredicted RBP27.97■■■□□ 2.07
APTR-201ENST00000398043 KIF13AQ9H1H9 1805 aa27.93■■■□□ 2.06
APTR-201ENST00000398043 FAM9AQ8IZU1 332 aaPredicted RBP27.93■■■□□ 2.06
APTR-201ENST00000398043 MAPKBP1O60336 1514 aa27.9■■■□□ 2.06
APTR-201ENST00000398043 GOLGA3Q08378 1498 aa27.89■■■□□ 2.06
APTR-201ENST00000398043 UHRF1BP1LA0JNW5 1464 aa27.89■■■□□ 2.05
APTR-201ENST00000398043 UACAQ9BZF9 1416 aa27.84■■■□□ 2.05
APTR-201ENST00000398043 ABCC2Q92887 1545 aa27.83■■■□□ 2.05
APTR-201ENST00000398043 SAMD9Q5K651 1589 aa27.83■■■□□ 2.05
APTR-201ENST00000398043 TTBK1Q5TCY1 1321 aaPredicted RBP27.83■■■□□ 2.05
APTR-201ENST00000398043 NPM1P06748 294 aaKnown RBP eCLIP27.79■■■□□ 2.04
APTR-201ENST00000398043 ABCC10Q5T3U5 1492 aa27.76■■■□□ 2.04
APTR-201ENST00000398043 ABCA8O94911 1581 aa27.76■■■□□ 2.03
APTR-201ENST00000398043 DIP2BQ9P265 1576 aa27.76■■■□□ 2.03
APTR-201ENST00000398043 KDM5BQ9UGL1 1544 aa27.76■■■□□ 2.03
APTR-201ENST00000398043 PLB1Q6P1J6 1458 aa27.74■■■□□ 2.03
APTR-201ENST00000398043 ZCCHC11Q5TAX3 1644 aaKnown RBP27.72■■■□□ 2.03
APTR-201ENST00000398043 ASXL2Q76L83 1435 aa27.66■■■□□ 2.02
APTR-201ENST00000398043 P3H3Q8IVL6 736 aa27.64■■■□□ 2.02
APTR-201ENST00000398043 FAM69CQ0P6D2 419 aa27.62■■■□□ 2.01
APTR-201ENST00000398043 EFCAB5A4FU69 1503 aa27.62■■■□□ 2.01
APTR-201ENST00000398043 GLI2P10070 1586 aa27.58■■■□□ 2.01
APTR-201ENST00000398043 TSPOAP1O95153 1857 aa27.57■■■□□ 2
APTR-201ENST00000398043 RAPGEF6Q8TEU7 1601 aa27.56■■■□□ 2
APTR-201ENST00000398043 FHOD3Q2V2M9 1422 aa27.56■■■□□ 2
APTR-201ENST00000398043 UBTFP17480 764 aaKnown RBP27.55■■■□□ 2
APTR-201ENST00000398043 EHMT2Q96KQ7 1210 aa27.55■■■□□ 2
APTR-201ENST00000398043 RANGAP1P46060 587 aaPredicted RBP27.53■■■□□ 2
APTR-201ENST00000398043 EPRSP07814 1512 aaKnown RBP27.51■■■□□ 2
APTR-201ENST00000398043 PPRC1Q5VV67 1664 aaKnown RBP27.51■■□□□ 1.99
APTR-201ENST00000398043 WDR7Q9Y4E6 1490 aa27.5■■□□□ 1.99
APTR-201ENST00000398043 ATP10BO94823 1461 aa27.49■■□□□ 1.99
APTR-201ENST00000398043 MAP3K4Q9Y6R4 1608 aa27.48■■□□□ 1.99
APTR-201ENST00000398043 ARHGAP35Q9NRY4 1499 aa27.47■■□□□ 1.99
APTR-201ENST00000398043 NUP153P49790 1475 aaKnown RBP27.45■■□□□ 1.99
APTR-201ENST00000398043 CFAP43Q8NDM7 1665 aa27.36■■□□□ 1.97
APTR-201ENST00000398043 ARID3CA6NKF2 412 aa27.35■■□□□ 1.97
APTR-201ENST00000398043 FMN1Q68DA7 1419 aa27.31■■□□□ 1.96
APTR-201ENST00000398043 KDM6BO15054 1643 aa27.3■■□□□ 1.96
APTR-201ENST00000398043 ABCA9Q8IUA7 1624 aa27.27■■□□□ 1.96
APTR-201ENST00000398043 KCNH8Q96L42 1107 aa27.27■■□□□ 1.96
APTR-201ENST00000398043 LRRIQ1Q96JM4 1722 aa27.27■■□□□ 1.96
APTR-201ENST00000398043 HECW1Q76N89 1606 aa27.25■■□□□ 1.95
APTR-201ENST00000398043 MAGI3Q5TCQ9 1506 aa27.24■■□□□ 1.95
APTR-201ENST00000398043 CDK13Q14004 1512 aaKnown RBP27.23■■□□□ 1.95
APTR-201ENST00000398043 TEX14Q8IWB6 1497 aa27.23■■□□□ 1.95
APTR-201ENST00000398043 CD109Q6YHK3 1445 aa27.23■■□□□ 1.95
APTR-201ENST00000398043 CLIP1P30622 1438 aa27.19■■□□□ 1.94
APTR-201ENST00000398043 COL17A1Q9UMD9 1497 aaPredicted RBP27.19■■□□□ 1.94
APTR-201ENST00000398043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.17■■□□□ 1.94
APTR-201ENST00000398043 HNRNPUL2Q1KMD3 747 aaKnown RBP27.17■■□□□ 1.94
APTR-201ENST00000398043 PCF11O94913 1555 aaKnown RBP27.16■■□□□ 1.94
APTR-201ENST00000398043 PLEKHD1A6NEE1 506 aa27.13■■□□□ 1.93
APTR-201ENST00000398043 CASKIN1Q8WXD9 1431 aa27.12■■□□□ 1.93
APTR-201ENST00000398043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.09■■□□□ 1.93
APTR-201ENST00000398043 TTC37Q6PGP7 1564 aa27.07■■□□□ 1.92
APTR-201ENST00000398043 FYCO1Q9BQS8 1478 aa27.06■■□□□ 1.92
APTR-201ENST00000398043 CEP162Q5TB80 1403 aa27.05■■□□□ 1.92
APTR-201ENST00000398043 ATP1B4Q9UN42 357 aaPredicted RBP27.04■■□□□ 1.92
APTR-201ENST00000398043 ARAP3Q8WWN8 1544 aa27.03■■□□□ 1.92
APTR-201ENST00000398043 LOC105371045A0A1W2PR82 267 aa27.02■■□□□ 1.92
APTR-201ENST00000398043 CCDC18Q5T9S5 1454 aa27.01■■□□□ 1.91
APTR-201ENST00000398043 KIF14Q15058 1648 aa27■■□□□ 1.91
APTR-201ENST00000398043 NEO1Q92859 1461 aa27■■□□□ 1.91
APTR-201ENST00000398043 TROQ12816 1431 aaPredicted RBP26.98■■□□□ 1.91
APTR-201ENST00000398043 PHLDB1Q86UU1 1377 aa26.97■■□□□ 1.91
APTR-201ENST00000398043 CDK11AQ9UQ88 783 aaPredicted RBP26.96■■□□□ 1.91
APTR-201ENST00000398043 MYO5CQ9NQX4 1742 aa26.94■■□□□ 1.9
APTR-201ENST00000398043 CFAP74Q9C0B2 1584 aa26.92■■□□□ 1.9
APTR-201ENST00000398043 PLCH2O75038 1416 aa26.9■■□□□ 1.9
APTR-201ENST00000398043 FRMPD1Q5SYB0 1578 aa26.89■■□□□ 1.9
APTR-201ENST00000398043 FANCAO15360 1455 aa26.89■■□□□ 1.9
APTR-201ENST00000398043 RICTORQ6R327 1708 aa26.87■■□□□ 1.89
APTR-201ENST00000398043 CDC42BPBQ9Y5S2 1711 aa26.86■■□□□ 1.89
APTR-201ENST00000398043 AKNAQ7Z591 1439 aa26.85■■□□□ 1.89
APTR-201ENST00000398043 CDC42BPAQ5VT25 1732 aa26.81■■□□□ 1.88
APTR-201ENST00000398043 PREX2Q70Z35 1606 aa26.79■■□□□ 1.88
APTR-201ENST00000398043 RAPGEF3O95398 923 aa26.79■■□□□ 1.88
APTR-201ENST00000398043 DENND4BO75064 1496 aaPredicted RBP26.77■■□□□ 1.88
APTR-201ENST00000398043 VPS8Q8N3P4 1428 aa26.74■■□□□ 1.87
APTR-201ENST00000398043 KDM4FA0A1W2PPD8 638 aa26.74■■□□□ 1.87
APTR-201ENST00000398043 ZMYM4Q5VZL5 1548 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms