RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
PPM1F-202ENST00000397495 CLIP1P30622 1438 aa24.24■■□□□ 1.47
PPM1F-202ENST00000397495 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
PPM1F-202ENST00000397495 TRIM26Q12899 539 aaPredicted RBP24.22■■□□□ 1.47
PPM1F-202ENST00000397495 CHD1O14646 1710 aa24.14■■□□□ 1.45
PPM1F-202ENST00000397495 CEP170Q5SW79 1584 aa24.1■■□□□ 1.45
PPM1F-202ENST00000397495 IQGAP2Q13576 1575 aa24.09■■□□□ 1.45
PPM1F-202ENST00000397495 ARHGAP35Q9NRY4 1499 aa24.09■■□□□ 1.45
PPM1F-202ENST00000397495 HRCP23327 699 aa24.06■■□□□ 1.44
PPM1F-202ENST00000397495 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
PPM1F-202ENST00000397495 NUP160Q12769 1436 aa24.04■■□□□ 1.44
PPM1F-202ENST00000397495 ARAP1Q96P48 1450 aa24.04■■□□□ 1.44
PPM1F-202ENST00000397495 P3H3Q8IVL6 736 aa24.01■■□□□ 1.43
PPM1F-202ENST00000397495 EFCAB5A4FU69 1503 aa23.99■■□□□ 1.43
PPM1F-202ENST00000397495 VPS8Q8N3P4 1428 aa23.97■■□□□ 1.43
PPM1F-202ENST00000397495 SAMD9Q5K651 1589 aa23.96■■□□□ 1.43
PPM1F-202ENST00000397495 FHOD3Q2V2M9 1422 aa23.94■■□□□ 1.42
PPM1F-202ENST00000397495 UGGT2Q9NYU1 1516 aa23.94■■□□□ 1.42
PPM1F-202ENST00000397495 JPH4Q96JJ6 628 aa23.88■■□□□ 1.41
PPM1F-202ENST00000397495 DISP1Q96F81 1524 aa23.85■■□□□ 1.41
PPM1F-202ENST00000397495 KIAA0556O60303 1618 aa23.84■■□□□ 1.41
PPM1F-202ENST00000397495 OSCARQ8IYS5 282 aa23.82■■□□□ 1.4
PPM1F-202ENST00000397495 PPARGC1BQ86YN6 1023 aaKnown RBP23.81■■□□□ 1.4
PPM1F-202ENST00000397495 CLASP1Q7Z460 1538 aa23.81■■□□□ 1.4
PPM1F-202ENST00000397495 FMN1Q68DA7 1419 aa23.79■■□□□ 1.4
PPM1F-202ENST00000397495 CARMIL2Q6F5E8 1435 aa23.77■■□□□ 1.4
PPM1F-202ENST00000397495 TTBK1Q5TCY1 1321 aaPredicted RBP23.77■■□□□ 1.4
PPM1F-202ENST00000397495 SHROOM2Q13796 1616 aa23.77■■□□□ 1.4
PPM1F-202ENST00000397495 PCF11O94913 1555 aaKnown RBP23.77■■□□□ 1.4
PPM1F-202ENST00000397495 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
PPM1F-202ENST00000397495 APLP2Q06481 763 aa23.75■■□□□ 1.39
PPM1F-202ENST00000397495 ATP1B4Q9UN42 357 aaPredicted RBP23.74■■□□□ 1.39
PPM1F-202ENST00000397495 CASKIN1Q8WXD9 1431 aa23.7■■□□□ 1.38
PPM1F-202ENST00000397495 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
PPM1F-202ENST00000397495 ERCC6L2Q5T890 1561 aa23.66■■□□□ 1.38
PPM1F-202ENST00000397495 LRRIQ1Q96JM4 1722 aa23.61■■□□□ 1.37
PPM1F-202ENST00000397495 TIAM1Q13009 1591 aa23.6■■□□□ 1.37
PPM1F-202ENST00000397495 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
PPM1F-202ENST00000397495 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
PPM1F-202ENST00000397495 CFAP43Q8NDM7 1665 aa23.58■■□□□ 1.37
PPM1F-202ENST00000397495 KANK4Q5T7N3 995 aaPredicted RBP23.57■■□□□ 1.36
PPM1F-202ENST00000397495 PTPRGP23470 1445 aa23.57■■□□□ 1.36
PPM1F-202ENST00000397495 PLB1Q6P1J6 1458 aa23.57■■□□□ 1.36
PPM1F-202ENST00000397495 MAP3K1Q13233 1512 aa23.57■■□□□ 1.36
PPM1F-202ENST00000397495 ZEB1P37275 1124 aaPredicted RBP23.55■■□□□ 1.36
PPM1F-202ENST00000397495 DNAJC5Q9H3Z4 198 aa23.55■■□□□ 1.36
PPM1F-202ENST00000397495 ARID3CA6NKF2 412 aa23.53■■□□□ 1.36
PPM1F-202ENST00000397495 ABCA8O94911 1581 aa23.5■■□□□ 1.35
PPM1F-202ENST00000397495 NUP153P49790 1475 aaKnown RBP23.5■■□□□ 1.35
PPM1F-202ENST00000397495 EPRSP07814 1512 aaKnown RBP23.5■■□□□ 1.35
PPM1F-202ENST00000397495 CCDC18Q5T9S5 1454 aa23.5■■□□□ 1.35
PPM1F-202ENST00000397495 CDK13Q14004 1512 aaKnown RBP23.49■■□□□ 1.35
PPM1F-202ENST00000397495 LRRC9Q6ZRR7 1453 aa23.48■■□□□ 1.35
PPM1F-202ENST00000397495 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
PPM1F-202ENST00000397495 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
PPM1F-202ENST00000397495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.42■■□□□ 1.34
PPM1F-202ENST00000397495 HNRNPUL2Q1KMD3 747 aaKnown RBP23.42■■□□□ 1.34
PPM1F-202ENST00000397495 MTUS2Q5JR59 1369 aa23.41■■□□□ 1.34
PPM1F-202ENST00000397495 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
PPM1F-202ENST00000397495 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
PPM1F-202ENST00000397495 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
PPM1F-202ENST00000397495 MAGI3Q5TCQ9 1506 aa23.38■■□□□ 1.33
PPM1F-202ENST00000397495 ABCC2Q92887 1545 aa23.37■■□□□ 1.33
PPM1F-202ENST00000397495 EHBP1L1Q8N3D4 1523 aa23.35■■□□□ 1.33
PPM1F-202ENST00000397495 ATP10BO94823 1461 aa23.35■■□□□ 1.33
PPM1F-202ENST00000397495 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
PPM1F-202ENST00000397495 SUPT6HQ7KZ85 1726 aaKnown RBP23.3■■□□□ 1.32
PPM1F-202ENST00000397495 UHRF1BP1LA0JNW5 1464 aa23.3■■□□□ 1.32
PPM1F-202ENST00000397495 ADCY10Q96PN6 1610 aa23.28■■□□□ 1.32
PPM1F-202ENST00000397495 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.32
PPM1F-202ENST00000397495 NCOA2Q15596 1464 aa23.26■■□□□ 1.31
PPM1F-202ENST00000397495 ZCCHC11Q5TAX3 1644 aaKnown RBP23.24■■□□□ 1.31
PPM1F-202ENST00000397495 PLEKHD1A6NEE1 506 aa23.24■■□□□ 1.31
PPM1F-202ENST00000397495 TROQ12816 1431 aaPredicted RBP23.23■■□□□ 1.31
PPM1F-202ENST00000397495 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
PPM1F-202ENST00000397495 KDM5BQ9UGL1 1544 aa23.22■■□□□ 1.31
PPM1F-202ENST00000397495 RRBP1Q9P2E9 1410 aaKnown RBP23.18■■□□□ 1.3
PPM1F-202ENST00000397495 KIF14Q15058 1648 aa23.18■■□□□ 1.3
PPM1F-202ENST00000397495 CCNB3Q8WWL7 1395 aa23.15■■□□□ 1.3
PPM1F-202ENST00000397495 MYOM3Q5VTT5 1437 aa23.14■■□□□ 1.29
PPM1F-202ENST00000397495 FGD6Q6ZV73 1430 aa23.11■■□□□ 1.29
PPM1F-202ENST00000397495 NPM1P06748 294 aaKnown RBP eCLIP23.09■■□□□ 1.29
PPM1F-202ENST00000397495 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
PPM1F-202ENST00000397495 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
PPM1F-202ENST00000397495 KCNH8Q96L42 1107 aa23.07■■□□□ 1.28
PPM1F-202ENST00000397495 ABCC10Q5T3U5 1492 aa23.05■■□□□ 1.28
PPM1F-202ENST00000397495 PTPN23Q9H3S7 1636 aa23.04■■□□□ 1.28
PPM1F-202ENST00000397495 ITSN2Q9NZM3 1697 aa23.04■■□□□ 1.28
PPM1F-202ENST00000397495 ITGAEP38570 1179 aa23.03■■□□□ 1.28
PPM1F-202ENST00000397495 CDC42BPAQ5VT25 1732 aa23.03■■□□□ 1.28
PPM1F-202ENST00000397495 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
PPM1F-202ENST00000397495 ASXL2Q76L83 1435 aa23.02■■□□□ 1.28
PPM1F-202ENST00000397495 GPATCH8Q9UKJ3 1502 aaKnown RBP23.02■■□□□ 1.28
PPM1F-202ENST00000397495 MIA2Q96PC5 1412 aa23.01■■□□□ 1.27
PPM1F-202ENST00000397495 TTC37Q6PGP7 1564 aa23■■□□□ 1.27
PPM1F-202ENST00000397495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23■■□□□ 1.276e-6■■□□□ 13.3
PPM1F-202ENST00000397495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.98■■□□□ 1.27
PPM1F-202ENST00000397495 CFDP1Q9UEE9 299 aaPredicted RBP22.98■■□□□ 1.27
PPM1F-202ENST00000397495 TCOF1Q13428 1488 aaKnown RBP22.96■■□□□ 1.27
PPM1F-202ENST00000397495 MYO5CQ9NQX4 1742 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms