RNA–Protein interactions for RNA: ENST00000397416.1

ROMO1-205, Transcript of reactive oxygen species modulator 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene ROMO1, Length 288 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROMO1-205ENST00000397416 NUP160Q12769 1436 aa29.78■■■□□ 2.36
ROMO1-205ENST00000397416 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
ROMO1-205ENST00000397416 KIAA0586Q9BVV6 1533 aa29.71■■■□□ 2.35
ROMO1-205ENST00000397416 TNIKQ9UKE5 1360 aa29.64■■■□□ 2.34
ROMO1-205ENST00000397416 JPH4Q96JJ6 628 aa29.64■■■□□ 2.34
ROMO1-205ENST00000397416 CLASP1Q7Z460 1538 aa29.59■■■□□ 2.33
ROMO1-205ENST00000397416 CTTNBP2Q8WZ74 1663 aa29.59■■■□□ 2.33
ROMO1-205ENST00000397416 IQGAP2Q13576 1575 aa29.56■■■□□ 2.32
ROMO1-205ENST00000397416 RANGAP1P46060 587 aaPredicted RBP29.56■■■□□ 2.32
ROMO1-205ENST00000397416 UGGT2Q9NYU1 1516 aa29.45■■■□□ 2.3
ROMO1-205ENST00000397416 PRG4Q92954 1404 aaPredicted RBP29.45■■■□□ 2.3
ROMO1-205ENST00000397416 SHROOM2Q13796 1616 aa29.42■■■□□ 2.3
ROMO1-205ENST00000397416 CARMIL2Q6F5E8 1435 aa29.42■■■□□ 2.3
ROMO1-205ENST00000397416 P3H3Q8IVL6 736 aa29.38■■■□□ 2.29
ROMO1-205ENST00000397416 CLIP1P30622 1438 aa29.36■■■□□ 2.29
ROMO1-205ENST00000397416 CEP162Q5TB80 1403 aa29.35■■■□□ 2.29
ROMO1-205ENST00000397416 DISP1Q96F81 1524 aa29.33■■■□□ 2.29
ROMO1-205ENST00000397416 EFCAB5A4FU69 1503 aa29.3■■■□□ 2.28
ROMO1-205ENST00000397416 ARHGAP35Q9NRY4 1499 aa29.27■■■□□ 2.28
ROMO1-205ENST00000397416 SAMD9Q5K651 1589 aa29.26■■■□□ 2.28
ROMO1-205ENST00000397416 KIAA0556O60303 1618 aa29.26■■■□□ 2.27
ROMO1-205ENST00000397416 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.27
ROMO1-205ENST00000397416 TTBK1Q5TCY1 1321 aaPredicted RBP29.25■■■□□ 2.27
ROMO1-205ENST00000397416 ARHGEF11O15085 1522 aa29.24■■■□□ 2.27
ROMO1-205ENST00000397416 PTPRGP23470 1445 aa29.21■■■□□ 2.27
ROMO1-205ENST00000397416 FHOD3Q2V2M9 1422 aa29.2■■■□□ 2.26
ROMO1-205ENST00000397416 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
ROMO1-205ENST00000397416 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
ROMO1-205ENST00000397416 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
ROMO1-205ENST00000397416 ARAP1Q96P48 1450 aa29.12■■■□□ 2.25
ROMO1-205ENST00000397416 CYB5RLQ6IPT4 315 aa29.1■■■□□ 2.25
ROMO1-205ENST00000397416 FMN1Q68DA7 1419 aa29.09■■■□□ 2.25
ROMO1-205ENST00000397416 ATP1B4Q9UN42 357 aaPredicted RBP29.01■■■□□ 2.23
ROMO1-205ENST00000397416 UACAQ9BZF9 1416 aa29■■■□□ 2.23
ROMO1-205ENST00000397416 PLB1Q6P1J6 1458 aa28.97■■■□□ 2.23
ROMO1-205ENST00000397416 VPS8Q8N3P4 1428 aa28.95■■■□□ 2.23
ROMO1-205ENST00000397416 CASKIN1Q8WXD9 1431 aa28.92■■■□□ 2.22
ROMO1-205ENST00000397416 ABCA8O94911 1581 aa28.92■■■□□ 2.22
ROMO1-205ENST00000397416 NPM1P06748 294 aaKnown RBP eCLIP28.9■■■□□ 2.22
ROMO1-205ENST00000397416 UHRF1BP1LA0JNW5 1464 aa28.9■■■□□ 2.22
ROMO1-205ENST00000397416 RAPGEF6Q8TEU7 1601 aa28.89■■■□□ 2.22
ROMO1-205ENST00000397416 ABCC2Q92887 1545 aa28.86■■■□□ 2.21
ROMO1-205ENST00000397416 FYCO1Q9BQS8 1478 aa28.84■■■□□ 2.21
ROMO1-205ENST00000397416 ARID3CA6NKF2 412 aa28.83■■■□□ 2.21
ROMO1-205ENST00000397416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.83■■■□□ 2.21
ROMO1-205ENST00000397416 HNRNPUL2Q1KMD3 747 aaKnown RBP28.83■■■□□ 2.21
ROMO1-205ENST00000397416 APLP2Q06481 763 aa28.82■■■□□ 2.2
ROMO1-205ENST00000397416 ADCY10Q96PN6 1610 aa28.8■■■□□ 2.2
ROMO1-205ENST00000397416 PCF11O94913 1555 aaKnown RBP28.8■■■□□ 2.2
ROMO1-205ENST00000397416 NUP153P49790 1475 aaKnown RBP28.8■■■□□ 2.2
ROMO1-205ENST00000397416 HECW1Q76N89 1606 aa28.8■■■□□ 2.2
ROMO1-205ENST00000397416 ATP10BO94823 1461 aa28.76■■■□□ 2.19
ROMO1-205ENST00000397416 EPRSP07814 1512 aaKnown RBP28.74■■■□□ 2.19
ROMO1-205ENST00000397416 KDM5BQ9UGL1 1544 aa28.74■■■□□ 2.19
ROMO1-205ENST00000397416 CDK11AQ9UQ88 783 aaPredicted RBP28.74■■■□□ 2.19
ROMO1-205ENST00000397416 CCDC18Q5T9S5 1454 aa28.71■■■□□ 2.19
ROMO1-205ENST00000397416 PLEKHD1A6NEE1 506 aa28.7■■■□□ 2.18
ROMO1-205ENST00000397416 CDK13Q14004 1512 aaKnown RBP28.65■■■□□ 2.18
ROMO1-205ENST00000397416 ZCCHC11Q5TAX3 1644 aaKnown RBP28.65■■■□□ 2.18
ROMO1-205ENST00000397416 MAP3K1Q13233 1512 aa28.62■■■□□ 2.17
ROMO1-205ENST00000397416 LRRIQ1Q96JM4 1722 aa28.61■■■□□ 2.17
ROMO1-205ENST00000397416 TIAM1Q13009 1591 aa28.57■■■□□ 2.16
ROMO1-205ENST00000397416 ASXL2Q76L83 1435 aa28.56■■■□□ 2.16
ROMO1-205ENST00000397416 MTUS2Q5JR59 1369 aa28.55■■■□□ 2.16
ROMO1-205ENST00000397416 KCNH8Q96L42 1107 aa28.55■■■□□ 2.16
ROMO1-205ENST00000397416 KANK4Q5T7N3 995 aaPredicted RBP28.54■■■□□ 2.16
ROMO1-205ENST00000397416 MAPKBP1O60336 1514 aa28.52■■■□□ 2.16
ROMO1-205ENST00000397416 CFAP43Q8NDM7 1665 aa28.5■■■□□ 2.15
ROMO1-205ENST00000397416 TROQ12816 1431 aaPredicted RBP28.5■■■□□ 2.15
ROMO1-205ENST00000397416 LRRC9Q6ZRR7 1453 aa28.49■■■□□ 2.15
ROMO1-205ENST00000397416 WDR7Q9Y4E6 1490 aa28.49■■■□□ 2.15
ROMO1-205ENST00000397416 PPARGC1BQ86YN6 1023 aaKnown RBP28.46■■■□□ 2.15
ROMO1-205ENST00000397416 MAGI3Q5TCQ9 1506 aa28.44■■■□□ 2.14
ROMO1-205ENST00000397416 EHBP1L1Q8N3D4 1523 aa28.41■■■□□ 2.14
ROMO1-205ENST00000397416 FAM69CQ0P6D2 419 aa28.39■■■□□ 2.14
ROMO1-205ENST00000397416 ABCC10Q5T3U5 1492 aa28.35■■■□□ 2.13
ROMO1-205ENST00000397416 TRHP20396 242 aaPredicted RBP28.33■■■□□ 2.13
ROMO1-205ENST00000397416 KIF14Q15058 1648 aa28.32■■■□□ 2.12
ROMO1-205ENST00000397416 SUPT6HQ7KZ85 1726 aaKnown RBP28.3■■■□□ 2.12
ROMO1-205ENST00000397416 NCOA2Q15596 1464 aa28.29■■■□□ 2.12
ROMO1-205ENST00000397416 GLI2P10070 1586 aa28.28■■■□□ 2.12
ROMO1-205ENST00000397416 CCNB3Q8WWL7 1395 aa28.27■■■□□ 2.12
ROMO1-205ENST00000397416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.27■■■□□ 2.122e-7■■■□□ 19.1
ROMO1-205ENST00000397416 DIP2BQ9P265 1576 aa28.24■■■□□ 2.11
ROMO1-205ENST00000397416 CD109Q6YHK3 1445 aa28.24■■■□□ 2.11
ROMO1-205ENST00000397416 ABCA9Q8IUA7 1624 aa28.22■■■□□ 2.11
ROMO1-205ENST00000397416 CFDP1Q9UEE9 299 aaPredicted RBP28.19■■■□□ 2.1
ROMO1-205ENST00000397416 PLCH2O75038 1416 aa28.18■■■□□ 2.1
ROMO1-205ENST00000397416 GPATCH8Q9UKJ3 1502 aaKnown RBP28.18■■■□□ 2.1
ROMO1-205ENST00000397416 TTC37Q6PGP7 1564 aa28.18■■■□□ 2.1
ROMO1-205ENST00000397416 PHLDB1Q86UU1 1377 aa28.17■■■□□ 2.1
ROMO1-205ENST00000397416 EFCAB2Q5VUJ9 269 aa28.17■■■□□ 2.1
ROMO1-205ENST00000397416 KIF13AQ9H1H9 1805 aa28.15■■■□□ 2.1
ROMO1-205ENST00000397416 MYOM3Q5VTT5 1437 aa28.14■■■□□ 2.1
ROMO1-205ENST00000397416 MAP3K4Q9Y6R4 1608 aa28.12■■■□□ 2.09
ROMO1-205ENST00000397416 ZNF777Q9ULD5 760 aaPredicted RBP28.12■■■□□ 2.09
ROMO1-205ENST00000397416 MYO5CQ9NQX4 1742 aa28.1■■■□□ 2.09
ROMO1-205ENST00000397416 MIA2Q96PC5 1412 aa28.09■■■□□ 2.09
ROMO1-205ENST00000397416 CDC42BPAQ5VT25 1732 aa28.08■■■□□ 2.09
ROMO1-205ENST00000397416 ARHGAP5Q13017 1502 aa28.08■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms