RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 SHROOM2Q13796 1616 aa27.9■■■□□ 2.06
TSPAN4-205ENST00000397406 CSRNP3Q8WYN3 585 aa27.86■■■□□ 2.05
TSPAN4-205ENST00000397406 TRHP20396 242 aaPredicted RBP27.8■■■□□ 2.04
TSPAN4-205ENST00000397406 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
TSPAN4-205ENST00000397406 PRG4Q92954 1404 aaPredicted RBP27.77■■■□□ 2.04
TSPAN4-205ENST00000397406 KIF21BO75037 1637 aa27.77■■■□□ 2.04
TSPAN4-205ENST00000397406 CUL7Q14999 1698 aa27.73■■■□□ 2.03
TSPAN4-205ENST00000397406 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
TSPAN4-205ENST00000397406 CARMIL1Q5VZK9 1371 aa27.7■■■□□ 2.03
TSPAN4-205ENST00000397406 KIAA0586Q9BVV6 1533 aa27.67■■■□□ 2.02
TSPAN4-205ENST00000397406 LOC105371045A0A1W2PR82 267 aa27.66■■■□□ 2.02
TSPAN4-205ENST00000397406 GOLGA3Q08378 1498 aa27.63■■■□□ 2.01
TSPAN4-205ENST00000397406 RAPGEF2Q9Y4G8 1499 aa27.62■■■□□ 2.01
TSPAN4-205ENST00000397406 EHMT2Q96KQ7 1210 aa27.56■■■□□ 2
TSPAN4-205ENST00000397406 TNIKQ9UKE5 1360 aa27.44■■□□□ 1.98
TSPAN4-205ENST00000397406 ADCY10Q96PN6 1610 aa27.42■■□□□ 1.98
TSPAN4-205ENST00000397406 UBTFP17480 764 aaKnown RBP27.41■■□□□ 1.98
TSPAN4-205ENST00000397406 IQGAP2Q13576 1575 aa27.4■■□□□ 1.98
TSPAN4-205ENST00000397406 CTTNBP2Q8WZ74 1663 aa27.39■■□□□ 1.97
TSPAN4-205ENST00000397406 DISP1Q96F81 1524 aa27.36■■□□□ 1.97
TSPAN4-205ENST00000397406 PTPRGP23470 1445 aa27.35■■□□□ 1.97
TSPAN4-205ENST00000397406 TTBK1Q5TCY1 1321 aaPredicted RBP27.29■■□□□ 1.96
TSPAN4-205ENST00000397406 CARMIL2Q6F5E8 1435 aa27.29■■□□□ 1.96
TSPAN4-205ENST00000397406 MAPKBP1O60336 1514 aa27.29■■□□□ 1.96
TSPAN4-205ENST00000397406 UGGT2Q9NYU1 1516 aa27.29■■□□□ 1.96
TSPAN4-205ENST00000397406 KIF13AQ9H1H9 1805 aa27.29■■□□□ 1.96
TSPAN4-205ENST00000397406 ABCC10Q5T3U5 1492 aa27.26■■□□□ 1.95
TSPAN4-205ENST00000397406 NPM1P06748 294 aaKnown RBP eCLIP27.24■■□□□ 1.95
TSPAN4-205ENST00000397406 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
TSPAN4-205ENST00000397406 FAM69CQ0P6D2 419 aa27.21■■□□□ 1.95
TSPAN4-205ENST00000397406 DIP2BQ9P265 1576 aa27.19■■□□□ 1.94
TSPAN4-205ENST00000397406 KIAA0556O60303 1618 aa27.18■■□□□ 1.94
TSPAN4-205ENST00000397406 ABCC2Q92887 1545 aa27.18■■□□□ 1.94
TSPAN4-205ENST00000397406 UACAQ9BZF9 1416 aa27.16■■□□□ 1.94
TSPAN4-205ENST00000397406 UHRF1BP1LA0JNW5 1464 aa27.16■■□□□ 1.94
TSPAN4-205ENST00000397406 CLIP1P30622 1438 aa27.13■■□□□ 1.93
TSPAN4-205ENST00000397406 ASXL2Q76L83 1435 aa27.07■■□□□ 1.92
TSPAN4-205ENST00000397406 KDM5BQ9UGL1 1544 aa27.06■■□□□ 1.92
TSPAN4-205ENST00000397406 RANGAP1P46060 587 aaPredicted RBP27.06■■□□□ 1.92
TSPAN4-205ENST00000397406 ARHGAP35Q9NRY4 1499 aa27.05■■□□□ 1.92
TSPAN4-205ENST00000397406 SAMD9Q5K651 1589 aa27.05■■□□□ 1.92
TSPAN4-205ENST00000397406 EFCAB5A4FU69 1503 aa27.04■■□□□ 1.92
TSPAN4-205ENST00000397406 PLB1Q6P1J6 1458 aa27.03■■□□□ 1.92
TSPAN4-205ENST00000397406 ABCA8O94911 1581 aa26.95■■□□□ 1.91
TSPAN4-205ENST00000397406 ZCCHC11Q5TAX3 1644 aaKnown RBP26.95■■□□□ 1.9
TSPAN4-205ENST00000397406 GLI2P10070 1586 aa26.93■■□□□ 1.9
TSPAN4-205ENST00000397406 P3H3Q8IVL6 736 aa26.92■■□□□ 1.9
TSPAN4-205ENST00000397406 EPRSP07814 1512 aaKnown RBP26.92■■□□□ 1.9
TSPAN4-205ENST00000397406 TSPOAP1O95153 1857 aa26.89■■□□□ 1.89
TSPAN4-205ENST00000397406 PPRC1Q5VV67 1664 aaKnown RBP26.88■■□□□ 1.89
TSPAN4-205ENST00000397406 FHOD3Q2V2M9 1422 aa26.87■■□□□ 1.89
TSPAN4-205ENST00000397406 VPS8Q8N3P4 1428 aa26.85■■□□□ 1.89
TSPAN4-205ENST00000397406 WDR7Q9Y4E6 1490 aa26.82■■□□□ 1.88
TSPAN4-205ENST00000397406 KDM6BO15054 1643 aa26.8■■□□□ 1.88
TSPAN4-205ENST00000397406 MAP3K4Q9Y6R4 1608 aa26.79■■□□□ 1.88
TSPAN4-205ENST00000397406 COL17A1Q9UMD9 1497 aaPredicted RBP26.78■■□□□ 1.88
TSPAN4-205ENST00000397406 ARID3CA6NKF2 412 aa26.76■■□□□ 1.87
TSPAN4-205ENST00000397406 ATP10BO94823 1461 aa26.76■■□□□ 1.87
TSPAN4-205ENST00000397406 FMN1Q68DA7 1419 aa26.74■■□□□ 1.87
TSPAN4-205ENST00000397406 PCF11O94913 1555 aaKnown RBP26.72■■□□□ 1.87
TSPAN4-205ENST00000397406 KCNH8Q96L42 1107 aa26.7■■□□□ 1.86
TSPAN4-205ENST00000397406 AEBP2Q6ZN18 517 aaPredicted RBP26.66■■□□□ 1.86
TSPAN4-205ENST00000397406 FYCO1Q9BQS8 1478 aa26.65■■□□□ 1.86
TSPAN4-205ENST00000397406 CASKIN1Q8WXD9 1431 aa26.65■■□□□ 1.86
TSPAN4-205ENST00000397406 NUP153P49790 1475 aaKnown RBP26.64■■□□□ 1.86
TSPAN4-205ENST00000397406 RAPGEF6Q8TEU7 1601 aa26.64■■□□□ 1.86
TSPAN4-205ENST00000397406 CD109Q6YHK3 1445 aa26.63■■□□□ 1.85
TSPAN4-205ENST00000397406 TEX14Q8IWB6 1497 aa26.61■■□□□ 1.85
TSPAN4-205ENST00000397406 MAGI3Q5TCQ9 1506 aa26.61■■□□□ 1.85
TSPAN4-205ENST00000397406 LRRIQ1Q96JM4 1722 aa26.61■■□□□ 1.85
TSPAN4-205ENST00000397406 KDM4FA0A1W2PPD8 638 aa26.6■■□□□ 1.85
TSPAN4-205ENST00000397406 HECW1Q76N89 1606 aa26.57■■□□□ 1.84
TSPAN4-205ENST00000397406 CFAP43Q8NDM7 1665 aa26.56■■□□□ 1.84
TSPAN4-205ENST00000397406 MAP3K1Q13233 1512 aa26.52■■□□□ 1.84
TSPAN4-205ENST00000397406 TIAM1Q13009 1591 aa26.51■■□□□ 1.83
TSPAN4-205ENST00000397406 ABCA9Q8IUA7 1624 aa26.48■■□□□ 1.83
TSPAN4-205ENST00000397406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.47■■□□□ 1.83
TSPAN4-205ENST00000397406 HNRNPUL2Q1KMD3 747 aaKnown RBP26.47■■□□□ 1.83
TSPAN4-205ENST00000397406 ATP1B4Q9UN42 357 aaPredicted RBP26.46■■□□□ 1.83
TSPAN4-205ENST00000397406 APLP2Q06481 763 aa26.45■■□□□ 1.82
TSPAN4-205ENST00000397406 CCDC18Q5T9S5 1454 aa26.44■■□□□ 1.82
TSPAN4-205ENST00000397406 CDK13Q14004 1512 aaKnown RBP26.41■■□□□ 1.82
TSPAN4-205ENST00000397406 ARAP3Q8WWN8 1544 aa26.4■■□□□ 1.82
TSPAN4-205ENST00000397406 PLEKHD1A6NEE1 506 aa26.37■■□□□ 1.81
TSPAN4-205ENST00000397406 PPARGC1BQ86YN6 1023 aaKnown RBP26.36■■□□□ 1.81
TSPAN4-205ENST00000397406 ADGRL1O94910 1474 aa26.35■■□□□ 1.81
TSPAN4-205ENST00000397406 LRRC9Q6ZRR7 1453 aa26.35■■□□□ 1.81
TSPAN4-205ENST00000397406 KANK4Q5T7N3 995 aaPredicted RBP26.35■■□□□ 1.81
TSPAN4-205ENST00000397406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.32■■□□□ 1.8
TSPAN4-205ENST00000397406 RAPGEF3O95398 923 aa26.31■■□□□ 1.8
TSPAN4-205ENST00000397406 NEO1Q92859 1461 aa26.3■■□□□ 1.8
TSPAN4-205ENST00000397406 PHLDB1Q86UU1 1377 aa26.28■■□□□ 1.8
TSPAN4-205ENST00000397406 TTC37Q6PGP7 1564 aa26.28■■□□□ 1.8
TSPAN4-205ENST00000397406 EHBP1L1Q8N3D4 1523 aa26.27■■□□□ 1.8
TSPAN4-205ENST00000397406 FRMPD1Q5SYB0 1578 aa26.26■■□□□ 1.79
TSPAN4-205ENST00000397406 MTUS2Q5JR59 1369 aa26.23■■□□□ 1.79
TSPAN4-205ENST00000397406 SUPT6HQ7KZ85 1726 aaKnown RBP26.2■■□□□ 1.78
TSPAN4-205ENST00000397406 AKNAQ7Z591 1439 aa26.19■■□□□ 1.78
TSPAN4-205ENST00000397406 FANCAO15360 1455 aa26.19■■□□□ 1.78
TSPAN4-205ENST00000397406 CDK11AQ9UQ88 783 aaPredicted RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms