RNA–Protein interactions for RNA: ENST00000397359.7

CDH24-202, Transcript of cadherin 24, humanhuman

TSL 5 BASIC

Gene CDH24, Length 3,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-202ENST00000397359 ERICH6Q7L0X2 663 aa21.64■■□□□ 1.05
CDH24-202ENST00000397359 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
CDH24-202ENST00000397359 ARAP1Q96P48 1450 aa21.61■■□□□ 1.05
CDH24-202ENST00000397359 PDS5BQ9NTI5 1447 aa21.57■■□□□ 1.04
CDH24-202ENST00000397359 ANO8Q9HCE9 1232 aaPredicted RBP21.57■■□□□ 1.04
CDH24-202ENST00000397359 CLSPNQ9HAW4 1339 aa21.57■■□□□ 1.04
CDH24-202ENST00000397359 ANP32CO43423 234 aa21.56■■□□□ 1.04
CDH24-202ENST00000397359 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
CDH24-202ENST00000397359 RBM19Q9Y4C8 960 aaKnown RBP21.52■■□□□ 1.04
CDH24-202ENST00000397359 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
CDH24-202ENST00000397359 CCDC136Q96JN2 1154 aa21.5■■□□□ 1.03
CDH24-202ENST00000397359 FANCD2Q9BXW9 1451 aa21.48■■□□□ 1.03
CDH24-202ENST00000397359 FBLN2P98095 1184 aa21.48■■□□□ 1.03
CDH24-202ENST00000397359 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
CDH24-202ENST00000397359 HNRNPUQ00839 825 aaKnown RBP eCLIP21.43■■□□□ 1.02
CDH24-202ENST00000397359 CHIC2Q9UKJ5 165 aa21.42■■□□□ 1.02
CDH24-202ENST00000397359 CFTRP13569 1480 aa21.42■■□□□ 1.02
CDH24-202ENST00000397359 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
CDH24-202ENST00000397359 CUX2O14529 1486 aa21.4■■□□□ 1.02
CDH24-202ENST00000397359 PRXQ9BXM0 1461 aa21.39■■□□□ 1.02
CDH24-202ENST00000397359 SETD5Q9C0A6 1442 aa21.38■■□□□ 1.01
CDH24-202ENST00000397359 ARHGAP35Q9NRY4 1499 aa21.38■■□□□ 1.01
CDH24-202ENST00000397359 RTN4Q9NQC3 1192 aaKnown RBP21.36■■□□□ 1.01
CDH24-202ENST00000397359 PHLDB1Q86UU1 1377 aa21.36■■□□□ 1.01
CDH24-202ENST00000397359 TONSLQ96HA7 1378 aa21.36■■□□□ 1.01
CDH24-202ENST00000397359 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
CDH24-202ENST00000397359 MSH5O43196 834 aa21.35■■□□□ 1.01
CDH24-202ENST00000397359 NBR1Q14596 966 aa21.33■■□□□ 1.01
CDH24-202ENST00000397359 TOP2BQ02880 1626 aa21.33■■□□□ 1.01
CDH24-202ENST00000397359 CARMIL1Q5VZK9 1371 aa21.32■■□□□ 1
CDH24-202ENST00000397359 RRP7BPQ9NSQ0 103 aa21.32■■□□□ 1
CDH24-202ENST00000397359 WDR97A6NE52 1622 aa21.3■■□□□ 1
CDH24-202ENST00000397359 CUX1P39880 1505 aa21.3■■□□□ 1
CDH24-202ENST00000397359 PPP1R15AO75807 674 aaPredicted RBP21.29■■□□□ 1
CDH24-202ENST00000397359 FAM9BQ8IZU0 186 aa21.29■■□□□ 1
CDH24-202ENST00000397359 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.28■■□□□ 1
CDH24-202ENST00000397359 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
CDH24-202ENST00000397359 DEKP35659 375 aaKnown RBP21.26■□□□□ 0.99
CDH24-202ENST00000397359 IGF1RP08069 1367 aa21.25■□□□□ 0.99
CDH24-202ENST00000397359 FHOD3Q2V2M9 1422 aa21.25■□□□□ 0.99
CDH24-202ENST00000397359 SALL2Q9Y467 1007 aaPredicted RBP21.25■□□□□ 0.99
CDH24-202ENST00000397359 FOXD1Q16676 465 aa21.23■□□□□ 0.99
CDH24-202ENST00000397359 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
CDH24-202ENST00000397359 ERICH3Q5RHP9 1530 aa21.2■□□□□ 0.98
CDH24-202ENST00000397359 MAPKBP1O60336 1514 aa21.19■□□□□ 0.98
CDH24-202ENST00000397359 ZNF326Q5BKZ1 582 aaKnown RBP21.18■□□□□ 0.98
CDH24-202ENST00000397359 CDK11AQ9UQ88 783 aaPredicted RBP21.18■□□□□ 0.98
CDH24-202ENST00000397359 MTUS2Q5JR59 1369 aa21.17■□□□□ 0.98
CDH24-202ENST00000397359 LRRC9Q6ZRR7 1453 aa21.13■□□□□ 0.97
CDH24-202ENST00000397359 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
CDH24-202ENST00000397359 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
CDH24-202ENST00000397359 B4GALNT3Q6L9W6 998 aa21.1■□□□□ 0.97
CDH24-202ENST00000397359 CCDC184Q52MB2 194 aa21.09■□□□□ 0.97
CDH24-202ENST00000397359 CCER2I3L3R5 266 aa21.08■□□□□ 0.97
CDH24-202ENST00000397359 HSPA5P11021 654 aaKnown RBP21.08■□□□□ 0.97
CDH24-202ENST00000397359 CHMP7Q8WUX9 453 aaPredicted RBP21.08■□□□□ 0.97
CDH24-202ENST00000397359 MRS2Q9HD23 443 aa21.06■□□□□ 0.96
CDH24-202ENST00000397359 KIF21AQ7Z4S6 1674 aa21.06■□□□□ 0.96
CDH24-202ENST00000397359 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
CDH24-202ENST00000397359 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
CDH24-202ENST00000397359 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
CDH24-202ENST00000397359 TIAM1Q13009 1591 aa21.04■□□□□ 0.96
CDH24-202ENST00000397359 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
CDH24-202ENST00000397359 FHAD1B1AJZ9 1412 aa21.03■□□□□ 0.96
CDH24-202ENST00000397359 AQRO60306 1485 aaKnown RBP eCLIP21■□□□□ 0.952e-6■■■■■ 35.2
CDH24-202ENST00000397359 EIF5BO60841 1220 aaKnown RBP21■□□□□ 0.95
CDH24-202ENST00000397359 EIF4G2P78344 907 aaKnown RBP eCLIP20.98■□□□□ 0.951e-6■■■■■ 49.1
CDH24-202ENST00000397359 IL27Q8NEV9 243 aa20.95■□□□□ 0.94
CDH24-202ENST00000397359 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
CDH24-202ENST00000397359 TIMELESSQ9UNS1 1208 aa20.95■□□□□ 0.94
CDH24-202ENST00000397359 WASHC2AQ641Q2 1341 aa20.94■□□□□ 0.94
CDH24-202ENST00000397359 CCDC18Q5T9S5 1454 aa20.94■□□□□ 0.94
CDH24-202ENST00000397359 L3MBTL2Q969R5 705 aa20.92■□□□□ 0.94
CDH24-202ENST00000397359 ZNF777Q9ULD5 760 aaPredicted RBP20.91■□□□□ 0.94
CDH24-202ENST00000397359 PCF11O94913 1555 aaKnown RBP20.91■□□□□ 0.94
CDH24-202ENST00000397359 C11orf95C9JLR9 678 aaPredicted RBP20.89■□□□□ 0.93
CDH24-202ENST00000397359 PTPRKQ15262 1439 aa20.88■□□□□ 0.93
CDH24-202ENST00000397359 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
CDH24-202ENST00000397359 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
CDH24-202ENST00000397359 ZNF608Q9ULD9 1512 aaPredicted RBP20.87■□□□□ 0.93
CDH24-202ENST00000397359 MPHOSPH9Q99550 1183 aa20.84■□□□□ 0.93
CDH24-202ENST00000397359 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
CDH24-202ENST00000397359 NPM2Q86SE8 214 aaKnown RBP20.82■□□□□ 0.92
CDH24-202ENST00000397359 PPP4R2Q9NY27 417 aa20.82■□□□□ 0.92
CDH24-202ENST00000397359 RTL5Q5HYW3 569 aaPredicted RBP20.79■□□□□ 0.92
CDH24-202ENST00000397359 KDM2AQ9Y2K7 1162 aa20.78■□□□□ 0.92
CDH24-202ENST00000397359 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
CDH24-202ENST00000397359 GAPVD1Q14C86 1478 aa20.78■□□□□ 0.92
CDH24-202ENST00000397359 PRKRIP1Q9H875 184 aaPredicted RBP20.78■□□□□ 0.92
CDH24-202ENST00000397359 PAK3O75914 559 aaPredicted RBP20.77■□□□□ 0.92
CDH24-202ENST00000397359 UACAQ9BZF9 1416 aa20.76■□□□□ 0.91
CDH24-202ENST00000397359 ZNF644Q9H582 1327 aaPredicted RBP20.75■□□□□ 0.91
CDH24-202ENST00000397359 NBPF8Q3BBV2 869 aa20.75■□□□□ 0.91
CDH24-202ENST00000397359 CASKIN1Q8WXD9 1431 aa20.73■□□□□ 0.91
CDH24-202ENST00000397359 NAIPQ13075 1403 aa20.73■□□□□ 0.91
CDH24-202ENST00000397359 FMN1Q68DA7 1419 aa20.73■□□□□ 0.91
CDH24-202ENST00000397359 WDR62O43379 1518 aa20.72■□□□□ 0.91
CDH24-202ENST00000397359 NCOA2Q15596 1464 aa20.71■□□□□ 0.91
CDH24-202ENST00000397359 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
CDH24-202ENST00000397359 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 253.6 ms