RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 NUP160Q12769 1436 aa21.57■■□□□ 1.04
MCF2L-209ENST00000397036 KIAA0586Q9BVV6 1533 aa21.57■■□□□ 1.04
MCF2L-209ENST00000397036 CTTNBP2Q8WZ74 1663 aa21.54■■□□□ 1.04
MCF2L-209ENST00000397036 FBLN2P98095 1184 aa21.54■■□□□ 1.04
MCF2L-209ENST00000397036 ARHGAP35Q9NRY4 1499 aa21.52■■□□□ 1.04
MCF2L-209ENST00000397036 EFCAB5A4FU69 1503 aa21.5■■□□□ 1.03
MCF2L-209ENST00000397036 IQGAP2Q13576 1575 aa21.49■■□□□ 1.03
MCF2L-209ENST00000397036 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
MCF2L-209ENST00000397036 VPS8Q8N3P4 1428 aa21.47■■□□□ 1.03
MCF2L-209ENST00000397036 UGGT2Q9NYU1 1516 aa21.46■■□□□ 1.03
MCF2L-209ENST00000397036 ARAP1Q96P48 1450 aa21.46■■□□□ 1.03
MCF2L-209ENST00000397036 CEP170Q5SW79 1584 aa21.46■■□□□ 1.03
MCF2L-209ENST00000397036 SAMD9Q5K651 1589 aa21.41■■□□□ 1.02
MCF2L-209ENST00000397036 JPH4Q96JJ6 628 aa21.4■■□□□ 1.02
MCF2L-209ENST00000397036 CHD1O14646 1710 aa21.37■■□□□ 1.01
MCF2L-209ENST00000397036 FMN1Q68DA7 1419 aa21.33■■□□□ 1.01
MCF2L-209ENST00000397036 FHOD3Q2V2M9 1422 aa21.32■■□□□ 1
MCF2L-209ENST00000397036 P3H3Q8IVL6 736 aa21.32■■□□□ 1
MCF2L-209ENST00000397036 DISP1Q96F81 1524 aa21.32■■□□□ 1
MCF2L-209ENST00000397036 CARMIL2Q6F5E8 1435 aa21.31■■□□□ 1
MCF2L-209ENST00000397036 CLASP1Q7Z460 1538 aa21.27■■□□□ 1
MCF2L-209ENST00000397036 OSCARQ8IYS5 282 aa21.26■□□□□ 0.99
MCF2L-209ENST00000397036 KIAA0556O60303 1618 aa21.25■□□□□ 0.99
MCF2L-209ENST00000397036 CASKIN1Q8WXD9 1431 aa21.25■□□□□ 0.99
MCF2L-209ENST00000397036 APLP2Q06481 763 aa21.24■□□□□ 0.99
MCF2L-209ENST00000397036 SHROOM2Q13796 1616 aa21.23■□□□□ 0.99
MCF2L-209ENST00000397036 PRG4Q92954 1404 aaPredicted RBP21.22■□□□□ 0.99
MCF2L-209ENST00000397036 MAP3K1Q13233 1512 aa21.22■□□□□ 0.99
MCF2L-209ENST00000397036 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
MCF2L-209ENST00000397036 PCF11O94913 1555 aaKnown RBP21.12■□□□□ 0.97
MCF2L-209ENST00000397036 PTPRGP23470 1445 aa21.11■□□□□ 0.97
MCF2L-209ENST00000397036 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
MCF2L-209ENST00000397036 TIAM1Q13009 1591 aa21.06■□□□□ 0.96
MCF2L-209ENST00000397036 CCDC18Q5T9S5 1454 aa21.05■□□□□ 0.96
MCF2L-209ENST00000397036 KANK4Q5T7N3 995 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-209ENST00000397036 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-209ENST00000397036 HECW1Q76N89 1606 aa21.04■□□□□ 0.96
MCF2L-209ENST00000397036 PPARGC1BQ86YN6 1023 aaKnown RBP21.03■□□□□ 0.96
MCF2L-209ENST00000397036 RAPGEF6Q8TEU7 1601 aa21.01■□□□□ 0.95
MCF2L-209ENST00000397036 LRRC9Q6ZRR7 1453 aa21.01■□□□□ 0.95
MCF2L-209ENST00000397036 ABCA8O94911 1581 aa21.01■□□□□ 0.95
MCF2L-209ENST00000397036 EPRSP07814 1512 aaKnown RBP21.01■□□□□ 0.95
MCF2L-209ENST00000397036 NUP153P49790 1475 aaKnown RBP21■□□□□ 0.95
MCF2L-209ENST00000397036 PLB1Q6P1J6 1458 aa21■□□□□ 0.95
MCF2L-209ENST00000397036 ERCC6L2Q5T890 1561 aa21■□□□□ 0.95
MCF2L-209ENST00000397036 UACAQ9BZF9 1416 aa20.98■□□□□ 0.95
MCF2L-209ENST00000397036 CFAP43Q8NDM7 1665 aa20.98■□□□□ 0.95
MCF2L-209ENST00000397036 TTBK1Q5TCY1 1321 aaPredicted RBP20.97■□□□□ 0.95
MCF2L-209ENST00000397036 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
MCF2L-209ENST00000397036 UHRF1BP1LA0JNW5 1464 aa20.94■□□□□ 0.94
MCF2L-209ENST00000397036 MTUS2Q5JR59 1369 aa20.92■□□□□ 0.94
MCF2L-209ENST00000397036 ATP10BO94823 1461 aa20.89■□□□□ 0.94
MCF2L-209ENST00000397036 LRRIQ1Q96JM4 1722 aa20.89■□□□□ 0.94
MCF2L-209ENST00000397036 ABCC2Q92887 1545 aa20.89■□□□□ 0.93
MCF2L-209ENST00000397036 CDK13Q14004 1512 aaKnown RBP20.87■□□□□ 0.93
MCF2L-209ENST00000397036 EHBP1L1Q8N3D4 1523 aa20.87■□□□□ 0.93
MCF2L-209ENST00000397036 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
MCF2L-209ENST00000397036 PLEKHD1A6NEE1 506 aa20.83■□□□□ 0.92
MCF2L-209ENST00000397036 MAGI3Q5TCQ9 1506 aa20.82■□□□□ 0.92
MCF2L-209ENST00000397036 TROQ12816 1431 aaPredicted RBP20.82■□□□□ 0.92
MCF2L-209ENST00000397036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.82■□□□□ 0.92
MCF2L-209ENST00000397036 HNRNPUL2Q1KMD3 747 aaKnown RBP20.82■□□□□ 0.92
MCF2L-209ENST00000397036 RRBP1Q9P2E9 1410 aaKnown RBP20.81■□□□□ 0.92
MCF2L-209ENST00000397036 ARHGEF11O15085 1522 aa20.81■□□□□ 0.92
MCF2L-209ENST00000397036 KDM5BQ9UGL1 1544 aa20.81■□□□□ 0.92
MCF2L-209ENST00000397036 ARID3CA6NKF2 412 aa20.79■□□□□ 0.92
MCF2L-209ENST00000397036 PHLDB1Q86UU1 1377 aa20.78■□□□□ 0.92
MCF2L-209ENST00000397036 NCOA2Q15596 1464 aa20.78■□□□□ 0.92
MCF2L-209ENST00000397036 SUPT6HQ7KZ85 1726 aaKnown RBP20.75■□□□□ 0.91
MCF2L-209ENST00000397036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.75■□□□□ 0.91
MCF2L-209ENST00000397036 CCNB3Q8WWL7 1395 aa20.74■□□□□ 0.91
MCF2L-209ENST00000397036 MYOM3Q5VTT5 1437 aa20.71■□□□□ 0.91
MCF2L-209ENST00000397036 ADCY10Q96PN6 1610 aa20.71■□□□□ 0.91
MCF2L-209ENST00000397036 MIA2Q96PC5 1412 aa20.68■□□□□ 0.9
MCF2L-209ENST00000397036 FGD6Q6ZV73 1430 aa20.68■□□□□ 0.9
MCF2L-209ENST00000397036 RIMBP3CA6NJZ7 1639 aa20.66■□□□□ 0.9
MCF2L-209ENST00000397036 RIMBP3BA6NNM3 1639 aa20.66■□□□□ 0.9
MCF2L-209ENST00000397036 RIMBP3Q9UFD9 1639 aa20.66■□□□□ 0.9
MCF2L-209ENST00000397036 NPM1P06748 294 aaKnown RBP eCLIP20.66■□□□□ 0.9
MCF2L-209ENST00000397036 ZCCHC11Q5TAX3 1644 aaKnown RBP20.66■□□□□ 0.9
MCF2L-209ENST00000397036 ABCC10Q5T3U5 1492 aa20.64■□□□□ 0.89
MCF2L-209ENST00000397036 CYB5RLQ6IPT4 315 aa20.62■□□□□ 0.89
MCF2L-209ENST00000397036 KIF14Q15058 1648 aa20.61■□□□□ 0.89
MCF2L-209ENST00000397036 GPATCH8Q9UKJ3 1502 aaKnown RBP20.61■□□□□ 0.89
MCF2L-209ENST00000397036 TCOF1Q13428 1488 aaKnown RBP20.6■□□□□ 0.89
MCF2L-209ENST00000397036 WDR7Q9Y4E6 1490 aa20.58■□□□□ 0.89
MCF2L-209ENST00000397036 FAM50AQ14320 339 aaKnown RBP20.56■□□□□ 0.88
MCF2L-209ENST00000397036 ASXL2Q76L83 1435 aa20.56■□□□□ 0.88
MCF2L-209ENST00000397036 CFDP1Q9UEE9 299 aaPredicted RBP20.55■□□□□ 0.88
MCF2L-209ENST00000397036 KCNH8Q96L42 1107 aa20.53■□□□□ 0.88
MCF2L-209ENST00000397036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.52■□□□□ 0.88
MCF2L-209ENST00000397036 PTPN23Q9H3S7 1636 aa20.52■□□□□ 0.88
MCF2L-209ENST00000397036 ITSN2Q9NZM3 1697 aa20.51■□□□□ 0.87
MCF2L-209ENST00000397036 MAPKBP1O60336 1514 aa20.49■□□□□ 0.87
MCF2L-209ENST00000397036 PLCH2O75038 1416 aa20.48■□□□□ 0.87
MCF2L-209ENST00000397036 ARAP3Q8WWN8 1544 aa20.46■□□□□ 0.87
MCF2L-209ENST00000397036 CDC42BPAQ5VT25 1732 aa20.45■□□□□ 0.86
MCF2L-209ENST00000397036 RSPH4AQ5TD94 716 aa20.44■□□□□ 0.86
MCF2L-209ENST00000397036 TTC37Q6PGP7 1564 aa20.44■□□□□ 0.86
MCF2L-209ENST00000397036 ZNF644Q9H582 1327 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms