RNA–Protein interactions for RNA: ENST00000396830.2

IFFO1-203, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-203ENST00000396830 RANGAP1P46060 587 aaPredicted RBP27.85■■■□□ 2.05
IFFO1-203ENST00000396830 CLIP1P30622 1438 aa27.85■■■□□ 2.05
IFFO1-203ENST00000396830 GRIN2AQ12879 1464 aa27.84■■■□□ 2.05
IFFO1-203ENST00000396830 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
IFFO1-203ENST00000396830 FBLN2P98095 1184 aa27.79■■■□□ 2.04
IFFO1-203ENST00000396830 CHD1O14646 1710 aa27.73■■■□□ 2.03
IFFO1-203ENST00000396830 CEP170Q5SW79 1584 aa27.7■■■□□ 2.03
IFFO1-203ENST00000396830 VPS8Q8N3P4 1428 aa27.7■■■□□ 2.02
IFFO1-203ENST00000396830 ARHGAP35Q9NRY4 1499 aa27.66■■■□□ 2.02
IFFO1-203ENST00000396830 IQGAP2Q13576 1575 aa27.65■■■□□ 2.02
IFFO1-203ENST00000396830 NUP160Q12769 1436 aa27.65■■■□□ 2.02
IFFO1-203ENST00000396830 KIAA0586Q9BVV6 1533 aa27.63■■■□□ 2.01
IFFO1-203ENST00000396830 ARAP1Q96P48 1450 aa27.62■■■□□ 2.01
IFFO1-203ENST00000396830 PPARGC1BQ86YN6 1023 aaKnown RBP27.58■■■□□ 2.01
IFFO1-203ENST00000396830 P3H3Q8IVL6 736 aa27.55■■■□□ 2
IFFO1-203ENST00000396830 EFCAB5A4FU69 1503 aa27.54■■■□□ 2
IFFO1-203ENST00000396830 SAMD9Q5K651 1589 aa27.53■■■□□ 2
IFFO1-203ENST00000396830 UGGT2Q9NYU1 1516 aa27.51■■□□□ 1.99
IFFO1-203ENST00000396830 ZEB1P37275 1124 aaPredicted RBP27.51■■□□□ 1.99
IFFO1-203ENST00000396830 FHOD3Q2V2M9 1422 aa27.48■■□□□ 1.99
IFFO1-203ENST00000396830 APLP2Q06481 763 aa27.47■■□□□ 1.99
IFFO1-203ENST00000396830 DISP1Q96F81 1524 aa27.42■■□□□ 1.98
IFFO1-203ENST00000396830 JPH4Q96JJ6 628 aa27.42■■□□□ 1.98
IFFO1-203ENST00000396830 CLASP1Q7Z460 1538 aa27.39■■□□□ 1.97
IFFO1-203ENST00000396830 KIAA0556O60303 1618 aa27.38■■□□□ 1.97
IFFO1-203ENST00000396830 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
IFFO1-203ENST00000396830 PCF11O94913 1555 aaKnown RBP27.29■■□□□ 1.96
IFFO1-203ENST00000396830 PRG4Q92954 1404 aaPredicted RBP27.29■■□□□ 1.96
IFFO1-203ENST00000396830 FMN1Q68DA7 1419 aa27.28■■□□□ 1.96
IFFO1-203ENST00000396830 CARMIL2Q6F5E8 1435 aa27.27■■□□□ 1.96
IFFO1-203ENST00000396830 TTBK1Q5TCY1 1321 aaPredicted RBP27.26■■□□□ 1.95
IFFO1-203ENST00000396830 OSCARQ8IYS5 282 aa27.24■■□□□ 1.95
IFFO1-203ENST00000396830 ERCC6L2Q5T890 1561 aa27.22■■□□□ 1.95
IFFO1-203ENST00000396830 CASKIN1Q8WXD9 1431 aa27.22■■□□□ 1.95
IFFO1-203ENST00000396830 MAP3K1Q13233 1512 aa27.21■■□□□ 1.95
IFFO1-203ENST00000396830 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
IFFO1-203ENST00000396830 ATP1B4Q9UN42 357 aaPredicted RBP27.17■■□□□ 1.94
IFFO1-203ENST00000396830 LRRIQ1Q96JM4 1722 aa27.14■■□□□ 1.93
IFFO1-203ENST00000396830 TIAM1Q13009 1591 aa27.09■■□□□ 1.93
IFFO1-203ENST00000396830 KANK4Q5T7N3 995 aaPredicted RBP27.08■■□□□ 1.93
IFFO1-203ENST00000396830 CFAP43Q8NDM7 1665 aa27.08■■□□□ 1.93
IFFO1-203ENST00000396830 RAPGEF6Q8TEU7 1601 aa27.08■■□□□ 1.92
IFFO1-203ENST00000396830 PLB1Q6P1J6 1458 aa27.07■■□□□ 1.92
IFFO1-203ENST00000396830 PTPRGP23470 1445 aa27.06■■□□□ 1.92
IFFO1-203ENST00000396830 HECW1Q76N89 1606 aa27.06■■□□□ 1.92
IFFO1-203ENST00000396830 CCER1Q8TC90 406 aaPredicted RBP27.04■■□□□ 1.92
IFFO1-203ENST00000396830 ABCA8O94911 1581 aa27.02■■□□□ 1.92
IFFO1-203ENST00000396830 NUP153P49790 1475 aaKnown RBP27■■□□□ 1.91
IFFO1-203ENST00000396830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.99■■□□□ 1.91
IFFO1-203ENST00000396830 ARID3CA6NKF2 412 aa26.99■■□□□ 1.91
IFFO1-203ENST00000396830 EPRSP07814 1512 aaKnown RBP26.98■■□□□ 1.91
IFFO1-203ENST00000396830 CDK13Q14004 1512 aaKnown RBP26.97■■□□□ 1.91
IFFO1-203ENST00000396830 RRBP1Q9P2E9 1410 aaKnown RBP26.97■■□□□ 1.91
IFFO1-203ENST00000396830 LRRC9Q6ZRR7 1453 aa26.96■■□□□ 1.91
IFFO1-203ENST00000396830 CCDC18Q5T9S5 1454 aa26.95■■□□□ 1.91
IFFO1-203ENST00000396830 UACAQ9BZF9 1416 aa26.9■■□□□ 1.9
IFFO1-203ENST00000396830 MAGI3Q5TCQ9 1506 aa26.89■■□□□ 1.89
IFFO1-203ENST00000396830 HNRNPUL2Q1KMD3 747 aaKnown RBP26.86■■□□□ 1.89
IFFO1-203ENST00000396830 ATP10BO94823 1461 aa26.84■■□□□ 1.89
IFFO1-203ENST00000396830 ABCC2Q92887 1545 aa26.83■■□□□ 1.89
IFFO1-203ENST00000396830 MTUS2Q5JR59 1369 aa26.83■■□□□ 1.89
IFFO1-203ENST00000396830 CCNB3Q8WWL7 1395 aa26.82■■□□□ 1.88
IFFO1-203ENST00000396830 ARHGEF11O15085 1522 aa26.82■■□□□ 1.88
IFFO1-203ENST00000396830 EHBP1L1Q8N3D4 1523 aa26.8■■□□□ 1.88
IFFO1-203ENST00000396830 UHRF1BP1LA0JNW5 1464 aa26.79■■□□□ 1.88
IFFO1-203ENST00000396830 ADCY10Q96PN6 1610 aa26.75■■□□□ 1.87
IFFO1-203ENST00000396830 RIMBP3CA6NJZ7 1639 aa26.74■■□□□ 1.87
IFFO1-203ENST00000396830 RIMBP3BA6NNM3 1639 aa26.74■■□□□ 1.87
IFFO1-203ENST00000396830 RIMBP3Q9UFD9 1639 aa26.74■■□□□ 1.87
IFFO1-203ENST00000396830 SUPT6HQ7KZ85 1726 aaKnown RBP26.72■■□□□ 1.87
IFFO1-203ENST00000396830 PHLDB1Q86UU1 1377 aa26.72■■□□□ 1.87
IFFO1-203ENST00000396830 CDK11AQ9UQ88 783 aaPredicted RBP26.71■■□□□ 1.87
IFFO1-203ENST00000396830 NCOA2Q15596 1464 aa26.7■■□□□ 1.86
IFFO1-203ENST00000396830 ZCCHC11Q5TAX3 1644 aaKnown RBP26.69■■□□□ 1.86
IFFO1-203ENST00000396830 TROQ12816 1431 aaPredicted RBP26.68■■□□□ 1.86
IFFO1-203ENST00000396830 KDM5BQ9UGL1 1544 aa26.68■■□□□ 1.86
IFFO1-203ENST00000396830 PLEKHD1A6NEE1 506 aa26.64■■□□□ 1.86
IFFO1-203ENST00000396830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.63■■□□□ 1.85
IFFO1-203ENST00000396830 CLSPNQ9HAW4 1339 aa26.63■■□□□ 1.85
IFFO1-203ENST00000396830 KIF14Q15058 1648 aa26.62■■□□□ 1.85
IFFO1-203ENST00000396830 CYB5RLQ6IPT4 315 aa26.58■■□□□ 1.85
IFFO1-203ENST00000396830 MYOM3Q5VTT5 1437 aa26.56■■□□□ 1.84
IFFO1-203ENST00000396830 FGD6Q6ZV73 1430 aa26.53■■□□□ 1.84
IFFO1-203ENST00000396830 ABCC10Q5T3U5 1492 aa26.5■■□□□ 1.83
IFFO1-203ENST00000396830 DHX57Q6P158 1386 aaKnown RBP26.47■■□□□ 1.83
IFFO1-203ENST00000396830 KCNH8Q96L42 1107 aa26.46■■□□□ 1.83
IFFO1-203ENST00000396830 NPM1P06748 294 aaKnown RBP eCLIP26.46■■□□□ 1.83
IFFO1-203ENST00000396830 FAM50AQ14320 339 aaKnown RBP26.46■■□□□ 1.83
IFFO1-203ENST00000396830 GPATCH8Q9UKJ3 1502 aaKnown RBP26.44■■□□□ 1.82
IFFO1-203ENST00000396830 ASXL2Q76L83 1435 aa26.44■■□□□ 1.82
IFFO1-203ENST00000396830 CDC42BPAQ5VT25 1732 aa26.44■■□□□ 1.82
IFFO1-203ENST00000396830 PTPN23Q9H3S7 1636 aa26.44■■□□□ 1.82
IFFO1-203ENST00000396830 WDR7Q9Y4E6 1490 aa26.43■■□□□ 1.82
IFFO1-203ENST00000396830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.42■■□□□ 1.82
IFFO1-203ENST00000396830 TTC37Q6PGP7 1564 aa26.42■■□□□ 1.82
IFFO1-203ENST00000396830 ITSN2Q9NZM3 1697 aa26.41■■□□□ 1.82
IFFO1-203ENST00000396830 MIA2Q96PC5 1412 aa26.41■■□□□ 1.82
IFFO1-203ENST00000396830 SETD5Q9C0A6 1442 aa26.41■■□□□ 1.82
IFFO1-203ENST00000396830 ITGAEP38570 1179 aa26.39■■□□□ 1.82
IFFO1-203ENST00000396830 TCOF1Q13428 1488 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms