RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
CCHCR1-203ENST00000396268 AQRO60306 1485 aaKnown RBP eCLIP20.86■□□□□ 0.939e-15■■■■■ 34.7
CCHCR1-203ENST00000396268 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
CCHCR1-203ENST00000396268 ABCA5Q8WWZ7 1642 aa20.84■□□□□ 0.93
CCHCR1-203ENST00000396268 MYT1Q01538 1121 aa20.83■□□□□ 0.93
CCHCR1-203ENST00000396268 WDR62O43379 1518 aa20.82■□□□□ 0.92
CCHCR1-203ENST00000396268 ZNF608Q9ULD9 1512 aaPredicted RBP20.81■□□□□ 0.92
CCHCR1-203ENST00000396268 VPS8Q8N3P4 1428 aa20.8■□□□□ 0.92
CCHCR1-203ENST00000396268 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
CCHCR1-203ENST00000396268 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.92
CCHCR1-203ENST00000396268 P3H3Q8IVL6 736 aa20.75■□□□□ 0.91
CCHCR1-203ENST00000396268 MIER1Q8N108 512 aa20.75■□□□□ 0.91
CCHCR1-203ENST00000396268 ARHGAP35Q9NRY4 1499 aa20.75■□□□□ 0.91
CCHCR1-203ENST00000396268 CUL7Q14999 1698 aa20.72■□□□□ 0.91
CCHCR1-203ENST00000396268 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
CCHCR1-203ENST00000396268 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
CCHCR1-203ENST00000396268 GRIN2BQ13224 1484 aa20.61■□□□□ 0.89
CCHCR1-203ENST00000396268 EIF4G3O43432 1585 aaKnown RBP20.6■□□□□ 0.89
CCHCR1-203ENST00000396268 KANK4Q5T7N3 995 aaPredicted RBP20.59■□□□□ 0.89
CCHCR1-203ENST00000396268 FHOD3Q2V2M9 1422 aa20.58■□□□□ 0.89
CCHCR1-203ENST00000396268 CTTNBP2Q8WZ74 1663 aa20.57■□□□□ 0.88
CCHCR1-203ENST00000396268 ADAMTS12P58397 1594 aa20.57■□□□□ 0.88
CCHCR1-203ENST00000396268 FHAD1B1AJZ9 1412 aa20.56■□□□□ 0.88
CCHCR1-203ENST00000396268 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
CCHCR1-203ENST00000396268 ATP1B4Q9UN42 357 aaPredicted RBP20.52■□□□□ 0.88
CCHCR1-203ENST00000396268 FBLN2P98095 1184 aa20.51■□□□□ 0.87
CCHCR1-203ENST00000396268 DHX57Q6P158 1386 aaKnown RBP20.47■□□□□ 0.87
CCHCR1-203ENST00000396268 CLSPNQ9HAW4 1339 aa20.43■□□□□ 0.86
CCHCR1-203ENST00000396268 ITGAEP38570 1179 aa20.43■□□□□ 0.86
CCHCR1-203ENST00000396268 CHMP7Q8WUX9 453 aaPredicted RBP20.43■□□□□ 0.86
CCHCR1-203ENST00000396268 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
CCHCR1-203ENST00000396268 GRIN2AQ12879 1464 aa20.4■□□□□ 0.86
CCHCR1-203ENST00000396268 EFCAB5A4FU69 1503 aa20.4■□□□□ 0.86
CCHCR1-203ENST00000396268 SAMD9Q5K651 1589 aa20.38■□□□□ 0.85
CCHCR1-203ENST00000396268 IQGAP2Q13576 1575 aa20.38■□□□□ 0.85
CCHCR1-203ENST00000396268 MAGI1Q96QZ7 1491 aaPredicted RBP20.36■□□□□ 0.85
CCHCR1-203ENST00000396268 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
CCHCR1-203ENST00000396268 TIAM1Q13009 1591 aa20.33■□□□□ 0.85
CCHCR1-203ENST00000396268 CEP170Q5SW79 1584 aa20.32■□□□□ 0.84
CCHCR1-203ENST00000396268 ARID3CA6NKF2 412 aa20.32■□□□□ 0.84
CCHCR1-203ENST00000396268 RRBP1Q9P2E9 1410 aaKnown RBP20.31■□□□□ 0.84
CCHCR1-203ENST00000396268 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
CCHCR1-203ENST00000396268 CASKIN1Q8WXD9 1431 aa20.29■□□□□ 0.84
CCHCR1-203ENST00000396268 KIAA0586Q9BVV6 1533 aa20.29■□□□□ 0.84
CCHCR1-203ENST00000396268 FMN1Q68DA7 1419 aa20.28■□□□□ 0.84
CCHCR1-203ENST00000396268 SUPT16HQ9Y5B9 1047 aaKnown RBP20.27■□□□□ 0.83
CCHCR1-203ENST00000396268 LRRC9Q6ZRR7 1453 aa20.26■□□□□ 0.83
CCHCR1-203ENST00000396268 FYCO1Q9BQS8 1478 aa20.26■□□□□ 0.83
CCHCR1-203ENST00000396268 LRRIQ1Q96JM4 1722 aa20.25■□□□□ 0.83
CCHCR1-203ENST00000396268 DISP1Q96F81 1524 aa20.24■□□□□ 0.83
CCHCR1-203ENST00000396268 UGGT2Q9NYU1 1516 aa20.23■□□□□ 0.83
CCHCR1-203ENST00000396268 CFAP43Q8NDM7 1665 aa20.21■□□□□ 0.83
CCHCR1-203ENST00000396268 PHLDB1Q86UU1 1377 aa20.21■□□□□ 0.83
CCHCR1-203ENST00000396268 BCANQ96GW7 911 aa20.21■□□□□ 0.83
CCHCR1-203ENST00000396268 NUP160Q12769 1436 aa20.2■□□□□ 0.82
CCHCR1-203ENST00000396268 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
CCHCR1-203ENST00000396268 JPH4Q96JJ6 628 aa20.19■□□□□ 0.82
CCHCR1-203ENST00000396268 KIAA0556O60303 1618 aa20.18■□□□□ 0.82
CCHCR1-203ENST00000396268 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
CCHCR1-203ENST00000396268 CHD1O14646 1710 aa20.15■□□□□ 0.82
CCHCR1-203ENST00000396268 TSHZ2Q9NRE2 1034 aa20.14■□□□□ 0.82
CCHCR1-203ENST00000396268 FAM50AQ14320 339 aaKnown RBP20.14■□□□□ 0.81
CCHCR1-203ENST00000396268 CDK13Q14004 1512 aaKnown RBP20.13■□□□□ 0.81
CCHCR1-203ENST00000396268 MTUS2Q5JR59 1369 aa20.11■□□□□ 0.81
CCHCR1-203ENST00000396268 MAGI3Q5TCQ9 1506 aa20.11■□□□□ 0.81
CCHCR1-203ENST00000396268 KCNH8Q96L42 1107 aa20.09■□□□□ 0.81
CCHCR1-203ENST00000396268 EPRSP07814 1512 aaKnown RBP20.07■□□□□ 0.8
CCHCR1-203ENST00000396268 PLB1Q6P1J6 1458 aa20.07■□□□□ 0.8
CCHCR1-203ENST00000396268 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
CCHCR1-203ENST00000396268 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
CCHCR1-203ENST00000396268 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
CCHCR1-203ENST00000396268 ANP32EQ9BTT0 268 aa20.04■□□□□ 0.8
CCHCR1-203ENST00000396268 NUP153P49790 1475 aaKnown RBP20.03■□□□□ 0.8
CCHCR1-203ENST00000396268 PRG4Q92954 1404 aaPredicted RBP20.03■□□□□ 0.8
CCHCR1-203ENST00000396268 MAPKBP1O60336 1514 aa20.02■□□□□ 0.8
CCHCR1-203ENST00000396268 CARMIL2Q6F5E8 1435 aa20.01■□□□□ 0.79
CCHCR1-203ENST00000396268 NCOA2Q15596 1464 aa20■□□□□ 0.79
CCHCR1-203ENST00000396268 DDX10Q13206 875 aaKnown RBP20■□□□□ 0.79
CCHCR1-203ENST00000396268 RAPGEF6Q8TEU7 1601 aa19.99■□□□□ 0.79
CCHCR1-203ENST00000396268 ERCC6L2Q5T890 1561 aa19.98■□□□□ 0.79
CCHCR1-203ENST00000396268 CCDC18Q5T9S5 1454 aa19.98■□□□□ 0.79
CCHCR1-203ENST00000396268 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
CCHCR1-203ENST00000396268 EHBP1L1Q8N3D4 1523 aa19.95■□□□□ 0.78
CCHCR1-203ENST00000396268 FGD6Q6ZV73 1430 aa19.94■□□□□ 0.78
CCHCR1-203ENST00000396268 HIRIP3Q9BW71 556 aaPredicted RBP19.94■□□□□ 0.78
CCHCR1-203ENST00000396268 SUPT6HQ7KZ85 1726 aaKnown RBP19.92■□□□□ 0.78
CCHCR1-203ENST00000396268 FKBP8Q14318 412 aa19.91■□□□□ 0.78
CCHCR1-203ENST00000396268 MYOM3Q5VTT5 1437 aa19.9■□□□□ 0.78
CCHCR1-203ENST00000396268 PTPRGP23470 1445 aa19.89■□□□□ 0.78
CCHCR1-203ENST00000396268 ARHGEF11O15085 1522 aa19.88■□□□□ 0.77
CCHCR1-203ENST00000396268 PTPRKQ15262 1439 aa19.87■□□□□ 0.77
CCHCR1-203ENST00000396268 SHROOM2Q13796 1616 aa19.86■□□□□ 0.77
CCHCR1-203ENST00000396268 ABCA8O94911 1581 aa19.86■□□□□ 0.77
CCHCR1-203ENST00000396268 CLASP1Q7Z460 1538 aa19.84■□□□□ 0.77
CCHCR1-203ENST00000396268 ATP10BO94823 1461 aa19.83■□□□□ 0.76
CCHCR1-203ENST00000396268 ZNF644Q9H582 1327 aaPredicted RBP19.82■□□□□ 0.76
CCHCR1-203ENST00000396268 PPP1R15AO75807 674 aaPredicted RBP19.82■□□□□ 0.76
CCHCR1-203ENST00000396268 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
CCHCR1-203ENST00000396268 PTPN23Q9H3S7 1636 aa19.81■□□□□ 0.76
CCHCR1-203ENST00000396268 CHIC2Q9UKJ5 165 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms