RNA–Protein interactions for RNA: ENST00000396189.2

PDE1C-204, Transcript of phosphodiesterase 1C, humanhuman

TSL 5

Gene PDE1C, Length 605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-204ENST00000396189 PRG4Q92954 1404 aaPredicted RBP33.02■■■□□ 2.88
PDE1C-204ENST00000396189 JPH4Q96JJ6 628 aa33■■■□□ 2.87
PDE1C-204ENST00000396189 CARMIL1Q5VZK9 1371 aa32.96■■■□□ 2.87
PDE1C-204ENST00000396189 KIAA0586Q9BVV6 1533 aa32.91■■■□□ 2.86
PDE1C-204ENST00000396189 RAPGEF2Q9Y4G8 1499 aa32.72■■■□□ 2.83
PDE1C-204ENST00000396189 IQGAP2Q13576 1575 aa32.71■■■□□ 2.83
PDE1C-204ENST00000396189 CARMIL2Q6F5E8 1435 aa32.61■■■□□ 2.81
PDE1C-204ENST00000396189 TTBK1Q5TCY1 1321 aaPredicted RBP32.6■■■□□ 2.81
PDE1C-204ENST00000396189 ADCY10Q96PN6 1610 aa32.6■■■□□ 2.81
PDE1C-204ENST00000396189 NPM1P06748 294 aaKnown RBP eCLIP32.59■■■□□ 2.81
PDE1C-204ENST00000396189 PTPRGP23470 1445 aa32.55■■■□□ 2.8
PDE1C-204ENST00000396189 CTTNBP2Q8WZ74 1663 aa32.53■■■□□ 2.8
PDE1C-204ENST00000396189 KIF13AQ9H1H9 1805 aa32.53■■■□□ 2.8
PDE1C-204ENST00000396189 TNIKQ9UKE5 1360 aa32.52■■■□□ 2.8
PDE1C-204ENST00000396189 DISP1Q96F81 1524 aa32.46■■■□□ 2.79
PDE1C-204ENST00000396189 UGGT2Q9NYU1 1516 aa32.46■■■□□ 2.79
PDE1C-204ENST00000396189 MAPKBP1O60336 1514 aa32.45■■■□□ 2.78
PDE1C-204ENST00000396189 PRXQ9BXM0 1461 aa32.43■■■□□ 2.78
PDE1C-204ENST00000396189 KIAA0556O60303 1618 aa32.4■■■□□ 2.78
PDE1C-204ENST00000396189 FAM69CQ0P6D2 419 aa32.36■■■□□ 2.77
PDE1C-204ENST00000396189 ABCC10Q5T3U5 1492 aa32.35■■■□□ 2.77
PDE1C-204ENST00000396189 DIP2BQ9P265 1576 aa32.32■■■□□ 2.77
PDE1C-204ENST00000396189 CSRNP3Q8WYN3 585 aa32.32■■■□□ 2.76
PDE1C-204ENST00000396189 ABCC2Q92887 1545 aa32.31■■■□□ 2.76
PDE1C-204ENST00000396189 UACAQ9BZF9 1416 aa32.31■■■□□ 2.76
PDE1C-204ENST00000396189 UHRF1BP1LA0JNW5 1464 aa32.28■■■□□ 2.76
PDE1C-204ENST00000396189 GOLGA3Q08378 1498 aa32.28■■■□□ 2.76
PDE1C-204ENST00000396189 EEA1Q15075 1411 aa32.26■■■□□ 2.75
PDE1C-204ENST00000396189 TSPOAP1O95153 1857 aa32.23■■■□□ 2.75
PDE1C-204ENST00000396189 FAM9AQ8IZU1 332 aaPredicted RBP32.21■■■□□ 2.75
PDE1C-204ENST00000396189 ASXL2Q76L83 1435 aa32.17■■■□□ 2.74
PDE1C-204ENST00000396189 PLB1Q6P1J6 1458 aa32.15■■■□□ 2.74
PDE1C-204ENST00000396189 ZCCHC11Q5TAX3 1644 aaKnown RBP32.15■■■□□ 2.74
PDE1C-204ENST00000396189 KDM5BQ9UGL1 1544 aa32.13■■■□□ 2.73
PDE1C-204ENST00000396189 CHIC1Q5VXU3 224 aa32.07■■■□□ 2.72
PDE1C-204ENST00000396189 P3H3Q8IVL6 736 aa32.06■■■□□ 2.72
PDE1C-204ENST00000396189 ABCA8O94911 1581 aa32.04■■■□□ 2.72
PDE1C-204ENST00000396189 KIF21BO75037 1637 aa32.01■■■□□ 2.72
PDE1C-204ENST00000396189 GLI2P10070 1586 aa32.01■■■□□ 2.71
PDE1C-204ENST00000396189 RANGAP1P46060 587 aaPredicted RBP32■■■□□ 2.71
PDE1C-204ENST00000396189 SAMD9Q5K651 1589 aa31.99■■■□□ 2.71
PDE1C-204ENST00000396189 KDM6BO15054 1643 aa31.99■■■□□ 2.71
PDE1C-204ENST00000396189 EPRSP07814 1512 aaKnown RBP31.96■■■□□ 2.71
PDE1C-204ENST00000396189 WDR7Q9Y4E6 1490 aa31.93■■■□□ 2.7
PDE1C-204ENST00000396189 PPRC1Q5VV67 1664 aaKnown RBP31.92■■■□□ 2.7
PDE1C-204ENST00000396189 EHMT2Q96KQ7 1210 aa31.9■■■□□ 2.7
PDE1C-204ENST00000396189 MAP3K4Q9Y6R4 1608 aa31.89■■■□□ 2.7
PDE1C-204ENST00000396189 ARID3CA6NKF2 412 aa31.88■■■□□ 2.69
PDE1C-204ENST00000396189 AEBP2Q6ZN18 517 aaPredicted RBP31.84■■■□□ 2.69
PDE1C-204ENST00000396189 RAPGEF6Q8TEU7 1601 aa31.84■■■□□ 2.69
PDE1C-204ENST00000396189 KCNH8Q96L42 1107 aa31.82■■■□□ 2.68
PDE1C-204ENST00000396189 FHOD3Q2V2M9 1422 aa31.82■■■□□ 2.68
PDE1C-204ENST00000396189 UBTFP17480 764 aaKnown RBP31.8■■■□□ 2.68
PDE1C-204ENST00000396189 TEX14Q8IWB6 1497 aa31.78■■■□□ 2.68
PDE1C-204ENST00000396189 ATP10BO94823 1461 aa31.77■■■□□ 2.68
PDE1C-204ENST00000396189 EFCAB5A4FU69 1503 aa31.76■■■□□ 2.68
PDE1C-204ENST00000396189 CFAP43Q8NDM7 1665 aa31.76■■■□□ 2.67
PDE1C-204ENST00000396189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.72■■■□□ 2.67
PDE1C-204ENST00000396189 HNRNPUL2Q1KMD3 747 aaKnown RBP31.72■■■□□ 2.67
PDE1C-204ENST00000396189 CD109Q6YHK3 1445 aa31.69■■■□□ 2.66
PDE1C-204ENST00000396189 NUP153P49790 1475 aaKnown RBP31.65■■■□□ 2.66
PDE1C-204ENST00000396189 MAGI3Q5TCQ9 1506 aa31.61■■■□□ 2.65
PDE1C-204ENST00000396189 COL17A1Q9UMD9 1497 aaPredicted RBP31.61■■■□□ 2.65
PDE1C-204ENST00000396189 ABCA9Q8IUA7 1624 aa31.56■■■□□ 2.64
PDE1C-204ENST00000396189 ARHGAP35Q9NRY4 1499 aa31.52■■■□□ 2.64
PDE1C-204ENST00000396189 PLEKHD1A6NEE1 506 aa31.48■■■□□ 2.63
PDE1C-204ENST00000396189 FMN1Q68DA7 1419 aa31.48■■■□□ 2.63
PDE1C-204ENST00000396189 ATP1B4Q9UN42 357 aaPredicted RBP31.47■■■□□ 2.63
PDE1C-204ENST00000396189 HECW1Q76N89 1606 aa31.44■■■□□ 2.62
PDE1C-204ENST00000396189 CDK13Q14004 1512 aaKnown RBP31.44■■■□□ 2.62
PDE1C-204ENST00000396189 KDM4FA0A1W2PPD8 638 aa31.39■■■□□ 2.62
PDE1C-204ENST00000396189 ARAP3Q8WWN8 1544 aa31.36■■■□□ 2.61
PDE1C-204ENST00000396189 PHLDB1Q86UU1 1377 aa31.33■■■□□ 2.61
PDE1C-204ENST00000396189 NEO1Q92859 1461 aa31.33■■■□□ 2.61
PDE1C-204ENST00000396189 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.31■■■□□ 2.6
PDE1C-204ENST00000396189 ADGRL1O94910 1474 aa31.31■■■□□ 2.6
PDE1C-204ENST00000396189 TTC37Q6PGP7 1564 aa31.3■■■□□ 2.6
PDE1C-204ENST00000396189 LRRIQ1Q96JM4 1722 aa31.26■■■□□ 2.59
PDE1C-204ENST00000396189 CDK11AQ9UQ88 783 aaPredicted RBP31.25■■■□□ 2.59
PDE1C-204ENST00000396189 CFAP74Q9C0B2 1584 aa31.25■■■□□ 2.59
PDE1C-204ENST00000396189 PCF11O94913 1555 aaKnown RBP31.22■■■□□ 2.59
PDE1C-204ENST00000396189 RAPGEF3O95398 923 aa31.22■■■□□ 2.59
PDE1C-204ENST00000396189 FANCAO15360 1455 aa31.21■■■□□ 2.59
PDE1C-204ENST00000396189 CLIP1P30622 1438 aa31.2■■■□□ 2.59
PDE1C-204ENST00000396189 KIF14Q15058 1648 aa31.16■■■□□ 2.58
PDE1C-204ENST00000396189 AKNAQ7Z591 1439 aa31.16■■■□□ 2.58
PDE1C-204ENST00000396189 MYO5CQ9NQX4 1742 aa31.16■■■□□ 2.58
PDE1C-204ENST00000396189 FRMPD1Q5SYB0 1578 aa31.16■■■□□ 2.58
PDE1C-204ENST00000396189 CASKIN1Q8WXD9 1431 aa31.15■■■□□ 2.58
PDE1C-204ENST00000396189 TROQ12816 1431 aaPredicted RBP31.13■■■□□ 2.57
PDE1C-204ENST00000396189 DENND4BO75064 1496 aaPredicted RBP31.13■■■□□ 2.57
PDE1C-204ENST00000396189 CCDC18Q5T9S5 1454 aa31.12■■■□□ 2.57
PDE1C-204ENST00000396189 RICTORQ6R327 1708 aa31.12■■■□□ 2.57
PDE1C-204ENST00000396189 PLCH2O75038 1416 aa31.09■■■□□ 2.57
PDE1C-204ENST00000396189 FYCO1Q9BQS8 1478 aa31.08■■■□□ 2.57
PDE1C-204ENST00000396189 ARHGAP5Q13017 1502 aa31■■■□□ 2.55
PDE1C-204ENST00000396189 ARHGEF40Q8TER5 1519 aa31■■■□□ 2.55
PDE1C-204ENST00000396189 EFCAB2Q5VUJ9 269 aa31■■■□□ 2.55
PDE1C-204ENST00000396189 SCAPERQ9BY12 1400 aa30.98■■■□□ 2.55
PDE1C-204ENST00000396189 ARID4BQ4LE39 1312 aaPredicted RBP30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms