RNA–Protein interactions for RNA: ENST00000396076.5

LDHB-203, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LDHB, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-203ENST00000396076 RANGAP1P46060 587 aaPredicted RBP37.36■■■■□ 3.57
LDHB-203ENST00000396076 CTTNBP2Q8WZ74 1663 aa37.29■■■■□ 3.56
LDHB-203ENST00000396076 NUP160Q12769 1436 aa37.19■■■■□ 3.54
LDHB-203ENST00000396076 KIAA0586Q9BVV6 1533 aa37.18■■■■□ 3.54
LDHB-203ENST00000396076 CEP170Q5SW79 1584 aa37.16■■■■□ 3.54
LDHB-203ENST00000396076 ARHGAP35Q9NRY4 1499 aa37.15■■■■□ 3.54
LDHB-203ENST00000396076 IQGAP2Q13576 1575 aa37.12■■■■□ 3.53
LDHB-203ENST00000396076 CHD1O14646 1710 aa37.1■■■■□ 3.53
LDHB-203ENST00000396076 ARAP1Q96P48 1450 aa37.06■■■■□ 3.52
LDHB-203ENST00000396076 EFCAB5A4FU69 1503 aa37.03■■■■□ 3.52
LDHB-203ENST00000396076 P3H3Q8IVL6 736 aa36.98■■■■□ 3.51
LDHB-203ENST00000396076 UGGT2Q9NYU1 1516 aa36.98■■■■□ 3.51
LDHB-203ENST00000396076 VPS8Q8N3P4 1428 aa36.98■■■■□ 3.51
LDHB-203ENST00000396076 SAMD9Q5K651 1589 aa36.95■■■■□ 3.51
LDHB-203ENST00000396076 JPH4Q96JJ6 628 aa36.92■■■■□ 3.5
LDHB-203ENST00000396076 FHOD3Q2V2M9 1422 aa36.89■■■■□ 3.5
LDHB-203ENST00000396076 DISP1Q96F81 1524 aa36.82■■■■□ 3.49
LDHB-203ENST00000396076 CLASP1Q7Z460 1538 aa36.76■■■■□ 3.48
LDHB-203ENST00000396076 KIAA0556O60303 1618 aa36.75■■■■□ 3.47
LDHB-203ENST00000396076 FMN1Q68DA7 1419 aa36.74■■■■□ 3.47
LDHB-203ENST00000396076 CARMIL2Q6F5E8 1435 aa36.74■■■■□ 3.47
LDHB-203ENST00000396076 OSCARQ8IYS5 282 aa36.71■■■■□ 3.47
LDHB-203ENST00000396076 PRG4Q92954 1404 aaPredicted RBP36.68■■■■□ 3.46
LDHB-203ENST00000396076 SHROOM2Q13796 1616 aa36.68■■■■□ 3.46
LDHB-203ENST00000396076 APLP2Q06481 763 aa36.63■■■■□ 3.45
LDHB-203ENST00000396076 CASKIN1Q8WXD9 1431 aa36.61■■■■□ 3.45
LDHB-203ENST00000396076 PCF11O94913 1555 aaKnown RBP36.57■■■■□ 3.44
LDHB-203ENST00000396076 FYCO1Q9BQS8 1478 aa36.55■■■■□ 3.44
LDHB-203ENST00000396076 PPARGC1BQ86YN6 1023 aaKnown RBP36.55■■■■□ 3.44
LDHB-203ENST00000396076 TTBK1Q5TCY1 1321 aaPredicted RBP36.53■■■■□ 3.44
LDHB-203ENST00000396076 ATP1B4Q9UN42 357 aaPredicted RBP36.53■■■■□ 3.44
LDHB-203ENST00000396076 ERCC6L2Q5T890 1561 aa36.45■■■■□ 3.43
LDHB-203ENST00000396076 PTPRGP23470 1445 aa36.43■■■■□ 3.42
LDHB-203ENST00000396076 MAP3K1Q13233 1512 aa36.43■■■■□ 3.42
LDHB-203ENST00000396076 KANK4Q5T7N3 995 aaPredicted RBP36.36■■■■□ 3.41
LDHB-203ENST00000396076 TIAM1Q13009 1591 aa36.36■■■■□ 3.41
LDHB-203ENST00000396076 PLB1Q6P1J6 1458 aa36.34■■■■□ 3.41
LDHB-203ENST00000396076 HECW1Q76N89 1606 aa36.34■■■■□ 3.41
LDHB-203ENST00000396076 RAPGEF6Q8TEU7 1601 aa36.33■■■■□ 3.41
LDHB-203ENST00000396076 ABCA8O94911 1581 aa36.28■■■■□ 3.4
LDHB-203ENST00000396076 NUP153P49790 1475 aaKnown RBP36.27■■■■□ 3.4
LDHB-203ENST00000396076 CCDC18Q5T9S5 1454 aa36.27■■■■□ 3.4
LDHB-203ENST00000396076 CFAP43Q8NDM7 1665 aa36.27■■■■□ 3.4
LDHB-203ENST00000396076 EPRSP07814 1512 aaKnown RBP36.26■■■■□ 3.4
LDHB-203ENST00000396076 LRRIQ1Q96JM4 1722 aa36.24■■■■□ 3.39
LDHB-203ENST00000396076 LRRC9Q6ZRR7 1453 aa36.24■■■■□ 3.39
LDHB-203ENST00000396076 TRIM26Q12899 539 aaPredicted RBP36.22■■■■□ 3.39
LDHB-203ENST00000396076 UACAQ9BZF9 1416 aa36.21■■■■□ 3.39
LDHB-203ENST00000396076 ARID3CA6NKF2 412 aa36.19■■■■□ 3.38
LDHB-203ENST00000396076 CDK13Q14004 1512 aaKnown RBP36.16■■■■□ 3.38
LDHB-203ENST00000396076 MTUS2Q5JR59 1369 aa36.1■■■■□ 3.37
LDHB-203ENST00000396076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.08■■■■□ 3.37
LDHB-203ENST00000396076 HNRNPUL2Q1KMD3 747 aaKnown RBP36.08■■■■□ 3.37
LDHB-203ENST00000396076 ABCC2Q92887 1545 aa36.07■■■■□ 3.36
LDHB-203ENST00000396076 ATP10BO94823 1461 aa36.06■■■■□ 3.36
LDHB-203ENST00000396076 UHRF1BP1LA0JNW5 1464 aa36.05■■■■□ 3.36
LDHB-203ENST00000396076 PCGF6Q9BYE7 350 aa36.04■■■■□ 3.36
LDHB-203ENST00000396076 CDK11AQ9UQ88 783 aaPredicted RBP36.04■■■■□ 3.36
LDHB-203ENST00000396076 ARHGEF11O15085 1522 aa36.03■■■■□ 3.36
LDHB-203ENST00000396076 MAGI3Q5TCQ9 1506 aa36.03■■■■□ 3.36
LDHB-203ENST00000396076 EHBP1L1Q8N3D4 1523 aa36.01■■■■□ 3.35
LDHB-203ENST00000396076 PLEKHD1A6NEE1 506 aa35.91■■■■□ 3.34
LDHB-203ENST00000396076 TROQ12816 1431 aaPredicted RBP35.89■■■■□ 3.34
LDHB-203ENST00000396076 KDM5BQ9UGL1 1544 aa35.89■■■■□ 3.34
LDHB-203ENST00000396076 PHLDB1Q86UU1 1377 aa35.89■■■■□ 3.34
LDHB-203ENST00000396076 NCOA2Q15596 1464 aa35.87■■■■□ 3.33
LDHB-203ENST00000396076 ADCY10Q96PN6 1610 aa35.87■■■■□ 3.33
LDHB-203ENST00000396076 RIMBP3CA6NJZ7 1639 aa35.86■■■■□ 3.33
LDHB-203ENST00000396076 RIMBP3BA6NNM3 1639 aa35.86■■■■□ 3.33
LDHB-203ENST00000396076 RIMBP3Q9UFD9 1639 aa35.86■■■■□ 3.33
LDHB-203ENST00000396076 SUPT6HQ7KZ85 1726 aaKnown RBP35.85■■■■□ 3.33
LDHB-203ENST00000396076 RRBP1Q9P2E9 1410 aaKnown RBP35.8■■■■□ 3.32
LDHB-203ENST00000396076 ZCCHC11Q5TAX3 1644 aaKnown RBP35.78■■■■□ 3.32
LDHB-203ENST00000396076 CYB5RLQ6IPT4 315 aa35.75■■■■□ 3.31
LDHB-203ENST00000396076 CCNB3Q8WWL7 1395 aa35.73■■■■□ 3.31
LDHB-203ENST00000396076 MYOM3Q5VTT5 1437 aa35.71■■■■□ 3.31
LDHB-203ENST00000396076 NPM1P06748 294 aaKnown RBP eCLIP35.68■■■■□ 3.3
LDHB-203ENST00000396076 FGD6Q6ZV73 1430 aa35.66■■■■□ 3.3
LDHB-203ENST00000396076 KIF14Q15058 1648 aa35.66■■■■□ 3.3
LDHB-203ENST00000396076 ABCC10Q5T3U5 1492 aa35.6■■■■□ 3.29
LDHB-203ENST00000396076 KCNH8Q96L42 1107 aa35.57■■■■□ 3.29
LDHB-203ENST00000396076 MIA2Q96PC5 1412 aa35.57■■■■□ 3.28
LDHB-203ENST00000396076 FAM50AQ14320 339 aaKnown RBP35.57■■■■□ 3.28
LDHB-203ENST00000396076 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.56■■■■□ 3.28
LDHB-203ENST00000396076 WDR7Q9Y4E6 1490 aa35.56■■■■□ 3.28
LDHB-203ENST00000396076 ASXL2Q76L83 1435 aa35.55■■■■□ 3.28
LDHB-203ENST00000396076 GPATCH8Q9UKJ3 1502 aaKnown RBP35.54■■■■□ 3.28
LDHB-203ENST00000396076 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.47■■■■□ 3.271e-8■■□□□ 12.6
LDHB-203ENST00000396076 CFDP1Q9UEE9 299 aaPredicted RBP35.47■■■■□ 3.27
LDHB-203ENST00000396076 TCOF1Q13428 1488 aaKnown RBP35.46■■■■□ 3.27
LDHB-203ENST00000396076 PTPN23Q9H3S7 1636 aa35.46■■■■□ 3.27
LDHB-203ENST00000396076 ITSN2Q9NZM3 1697 aa35.44■■■■□ 3.26
LDHB-203ENST00000396076 ITGAEP38570 1179 aa35.42■■■■□ 3.26
LDHB-203ENST00000396076 TTC37Q6PGP7 1564 aa35.41■■■■□ 3.26
LDHB-203ENST00000396076 CDC42BPAQ5VT25 1732 aa35.39■■■■□ 3.26
LDHB-203ENST00000396076 ZNF644Q9H582 1327 aaPredicted RBP35.37■■■■□ 3.25
LDHB-203ENST00000396076 MAPKBP1O60336 1514 aa35.36■■■■□ 3.25
LDHB-203ENST00000396076 ZNF777Q9ULD5 760 aaPredicted RBP35.33■■■■□ 3.25
LDHB-203ENST00000396076 PREX2Q70Z35 1606 aa35.31■■■■□ 3.24
LDHB-203ENST00000396076 PLCH2O75038 1416 aa35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms