RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 DNAJC5Q9H3Z4 198 aa21.13■□□□□ 0.97
CLIC1-209ENST00000395892 RANGAP1P46060 587 aaPredicted RBP21.11■□□□□ 0.97
CLIC1-209ENST00000395892 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
CLIC1-209ENST00000395892 ARHGAP35Q9NRY4 1499 aa21.09■□□□□ 0.97
CLIC1-209ENST00000395892 TRIM26Q12899 539 aaPredicted RBP21.09■□□□□ 0.97
CLIC1-209ENST00000395892 FHAD1B1AJZ9 1412 aa21.09■□□□□ 0.97
CLIC1-209ENST00000395892 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
CLIC1-209ENST00000395892 PCGF6Q9BYE7 350 aa21.07■□□□□ 0.96
CLIC1-209ENST00000395892 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
CLIC1-209ENST00000395892 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
CLIC1-209ENST00000395892 PPARGC1BQ86YN6 1023 aaKnown RBP21.03■□□□□ 0.96
CLIC1-209ENST00000395892 CTTNBP2Q8WZ74 1663 aa21.02■□□□□ 0.95
CLIC1-209ENST00000395892 SNAPC4Q5SXM2 1469 aa20.98■□□□□ 0.95
CLIC1-209ENST00000395892 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
CLIC1-209ENST00000395892 EFCAB5A4FU69 1503 aa20.9■□□□□ 0.94
CLIC1-209ENST00000395892 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
CLIC1-209ENST00000395892 SYNJ2O15056 1496 aa20.87■□□□□ 0.93
CLIC1-209ENST00000395892 SAMD9Q5K651 1589 aa20.86■□□□□ 0.93
CLIC1-209ENST00000395892 P3H3Q8IVL6 736 aa20.86■□□□□ 0.93
CLIC1-209ENST00000395892 FHOD3Q2V2M9 1422 aa20.83■□□□□ 0.93
CLIC1-209ENST00000395892 KIAA0586Q9BVV6 1533 aa20.82■□□□□ 0.92
CLIC1-209ENST00000395892 IQGAP2Q13576 1575 aa20.81■□□□□ 0.92
CLIC1-209ENST00000395892 APLP2Q06481 763 aa20.8■□□□□ 0.92
CLIC1-209ENST00000395892 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
CLIC1-209ENST00000395892 KANK4Q5T7N3 995 aaPredicted RBP20.78■□□□□ 0.92
CLIC1-209ENST00000395892 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
CLIC1-209ENST00000395892 UGGT2Q9NYU1 1516 aa20.78■□□□□ 0.92
CLIC1-209ENST00000395892 MAP3K1Q13233 1512 aa20.77■□□□□ 0.92
CLIC1-209ENST00000395892 NUP160Q12769 1436 aa20.77■□□□□ 0.91
CLIC1-209ENST00000395892 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
CLIC1-209ENST00000395892 TTBK1Q5TCY1 1321 aaPredicted RBP20.76■□□□□ 0.91
CLIC1-209ENST00000395892 CASKIN1Q8WXD9 1431 aa20.73■□□□□ 0.91
CLIC1-209ENST00000395892 FMN1Q68DA7 1419 aa20.71■□□□□ 0.91
CLIC1-209ENST00000395892 FBLN2P98095 1184 aa20.71■□□□□ 0.91
CLIC1-209ENST00000395892 PCF11O94913 1555 aaKnown RBP20.71■□□□□ 0.91
CLIC1-209ENST00000395892 FYCO1Q9BQS8 1478 aa20.69■□□□□ 0.9
CLIC1-209ENST00000395892 DISP1Q96F81 1524 aa20.68■□□□□ 0.9
CLIC1-209ENST00000395892 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
CLIC1-209ENST00000395892 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
CLIC1-209ENST00000395892 KIAA0556O60303 1618 aa20.62■□□□□ 0.89
CLIC1-209ENST00000395892 LRRC9Q6ZRR7 1453 aa20.61■□□□□ 0.89
CLIC1-209ENST00000395892 CHD1O14646 1710 aa20.61■□□□□ 0.89
CLIC1-209ENST00000395892 CFAP43Q8NDM7 1665 aa20.61■□□□□ 0.89
CLIC1-209ENST00000395892 LRRIQ1Q96JM4 1722 aa20.58■□□□□ 0.89
CLIC1-209ENST00000395892 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
CLIC1-209ENST00000395892 HRCP23327 699 aa20.55■□□□□ 0.88
CLIC1-209ENST00000395892 RRBP1Q9P2E9 1410 aaKnown RBP20.51■□□□□ 0.87
CLIC1-209ENST00000395892 CARMIL2Q6F5E8 1435 aa20.49■□□□□ 0.87
CLIC1-209ENST00000395892 SHROOM2Q13796 1616 aa20.46■□□□□ 0.87
CLIC1-209ENST00000395892 HECW1Q76N89 1606 aa20.46■□□□□ 0.87
CLIC1-209ENST00000395892 EPRSP07814 1512 aaKnown RBP20.45■□□□□ 0.86
CLIC1-209ENST00000395892 PHLDB1Q86UU1 1377 aa20.45■□□□□ 0.86
CLIC1-209ENST00000395892 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
CLIC1-209ENST00000395892 CCDC18Q5T9S5 1454 aa20.44■□□□□ 0.86
CLIC1-209ENST00000395892 MAGI3Q5TCQ9 1506 aa20.43■□□□□ 0.86
CLIC1-209ENST00000395892 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
CLIC1-209ENST00000395892 RAPGEF6Q8TEU7 1601 aa20.42■□□□□ 0.86
CLIC1-209ENST00000395892 NUP153P49790 1475 aaKnown RBP20.42■□□□□ 0.86
CLIC1-209ENST00000395892 CCNB3Q8WWL7 1395 aa20.4■□□□□ 0.86
CLIC1-209ENST00000395892 CDK13Q14004 1512 aaKnown RBP20.38■□□□□ 0.85
CLIC1-209ENST00000395892 PLB1Q6P1J6 1458 aa20.38■□□□□ 0.85
CLIC1-209ENST00000395892 HNRNPUL2Q1KMD3 747 aaKnown RBP20.38■□□□□ 0.85
CLIC1-209ENST00000395892 MTUS2Q5JR59 1369 aa20.37■□□□□ 0.85
CLIC1-209ENST00000395892 ABCA8O94911 1581 aa20.37■□□□□ 0.85
CLIC1-209ENST00000395892 ARHGEF11O15085 1522 aa20.36■□□□□ 0.85
CLIC1-209ENST00000395892 EHBP1L1Q8N3D4 1523 aa20.35■□□□□ 0.85
CLIC1-209ENST00000395892 PTPRGP23470 1445 aa20.34■□□□□ 0.85
CLIC1-209ENST00000395892 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.84
CLIC1-209ENST00000395892 NCOA2Q15596 1464 aa20.32■□□□□ 0.84
CLIC1-209ENST00000395892 ARID3CA6NKF2 412 aa20.3■□□□□ 0.84
CLIC1-209ENST00000395892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.3■□□□□ 0.842e-12■■■□□ 15.8
CLIC1-209ENST00000395892 SUPT6HQ7KZ85 1726 aaKnown RBP20.3■□□□□ 0.84
CLIC1-209ENST00000395892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
CLIC1-209ENST00000395892 ATP10BO94823 1461 aa20.27■□□□□ 0.84
CLIC1-209ENST00000395892 FGD6Q6ZV73 1430 aa20.26■□□□□ 0.83
CLIC1-209ENST00000395892 MYOM3Q5VTT5 1437 aa20.25■□□□□ 0.83
CLIC1-209ENST00000395892 ZEB1P37275 1124 aaPredicted RBP20.23■□□□□ 0.83
CLIC1-209ENST00000395892 UACAQ9BZF9 1416 aa20.22■□□□□ 0.83
CLIC1-209ENST00000395892 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
CLIC1-209ENST00000395892 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
CLIC1-209ENST00000395892 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
CLIC1-209ENST00000395892 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
CLIC1-209ENST00000395892 CCER1Q8TC90 406 aaPredicted RBP20.18■□□□□ 0.82
CLIC1-209ENST00000395892 TCOF1Q13428 1488 aaKnown RBP20.17■□□□□ 0.82
CLIC1-209ENST00000395892 ITGAEP38570 1179 aa20.16■□□□□ 0.82
CLIC1-209ENST00000395892 MIA2Q96PC5 1412 aa20.15■□□□□ 0.82
CLIC1-209ENST00000395892 ADCY10Q96PN6 1610 aa20.15■□□□□ 0.82
CLIC1-209ENST00000395892 PLEKHD1A6NEE1 506 aa20.14■□□□□ 0.81
CLIC1-209ENST00000395892 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
CLIC1-209ENST00000395892 UHRF1BP1LA0JNW5 1464 aa20.13■□□□□ 0.81
CLIC1-209ENST00000395892 ABCC2Q92887 1545 aa20.12■□□□□ 0.81
CLIC1-209ENST00000395892 PTPRKQ15262 1439 aa20.12■□□□□ 0.81
CLIC1-209ENST00000395892 KIF14Q15058 1648 aa20.09■□□□□ 0.81
CLIC1-209ENST00000395892 ABCC10Q5T3U5 1492 aa20.09■□□□□ 0.81
CLIC1-209ENST00000395892 GPATCH8Q9UKJ3 1502 aaKnown RBP20.07■□□□□ 0.8
CLIC1-209ENST00000395892 SETD5Q9C0A6 1442 aa20.07■□□□□ 0.8
CLIC1-209ENST00000395892 KDM5BQ9UGL1 1544 aa20.04■□□□□ 0.8
CLIC1-209ENST00000395892 RAB3GAP2Q9H2M9 1393 aa20.04■□□□□ 0.8
CLIC1-209ENST00000395892 DHX57Q6P158 1386 aaKnown RBP20.03■□□□□ 0.8
CLIC1-209ENST00000395892 ZNF644Q9H582 1327 aaPredicted RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms