RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 RAPGEF2Q9Y4G8 1499 aa7.4□□□□□ -1.23
FGD4-201ENST00000395740 PRDM2Q13029 1718 aa7.38□□□□□ -1.23
FGD4-201ENST00000395740 ARAP1Q96P48 1450 aa7.37□□□□□ -1.23
FGD4-201ENST00000395740 FOXD4L1Q9NU39 408 aa7.37□□□□□ -1.23
FGD4-201ENST00000395740 HMGXB3Q12766 1538 aa7.36□□□□□ -1.23
FGD4-201ENST00000395740 NCAPD3P42695 1498 aa7.36□□□□□ -1.23
FGD4-201ENST00000395740 TIMELESSQ9UNS1 1208 aa7.34□□□□□ -1.23
FGD4-201ENST00000395740 HNRNPUL2Q1KMD3 747 aaKnown RBP7.34□□□□□ -1.24
FGD4-201ENST00000395740 SUPT16HQ9Y5B9 1047 aaKnown RBP7.32□□□□□ -1.24
FGD4-201ENST00000395740 CC2D2AQ9P2K1 1620 aa7.31□□□□□ -1.24
FGD4-201ENST00000395740 KIF27Q86VH2 1401 aa7.31□□□□□ -1.24
FGD4-201ENST00000395740 RNF216Q9NWF9 866 aaPredicted RBP7.31□□□□□ -1.24
FGD4-201ENST00000395740 YTHDC1Q96MU7 727 aaKnown RBP7.3□□□□□ -1.24
FGD4-201ENST00000395740 CCNB3Q8WWL7 1395 aa7.3□□□□□ -1.24
FGD4-201ENST00000395740 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.3□□□□□ -1.24
FGD4-201ENST00000395740 TIAM1Q13009 1591 aa7.29□□□□□ -1.24
FGD4-201ENST00000395740 CFAP43Q8NDM7 1665 aa7.29□□□□□ -1.24
FGD4-201ENST00000395740 PCDH10Q9P2E7 1040 aa7.29□□□□□ -1.24
FGD4-201ENST00000395740 ARHGAP35Q9NRY4 1499 aa7.28□□□□□ -1.24
FGD4-201ENST00000395740 CUX1P39880 1505 aa7.28□□□□□ -1.24
FGD4-201ENST00000395740 MAPKBP1O60336 1514 aa7.27□□□□□ -1.25
FGD4-201ENST00000395740 CFTRP13569 1480 aa7.26□□□□□ -1.25
FGD4-201ENST00000395740 ANP32EQ9BTT0 268 aa7.26□□□□□ -1.25
FGD4-201ENST00000395740 CCER2I3L3R5 266 aa7.25□□□□□ -1.25
FGD4-201ENST00000395740 ERICH6Q7L0X2 663 aa7.25□□□□□ -1.25
FGD4-201ENST00000395740 SETD5Q9C0A6 1442 aa7.25□□□□□ -1.25
FGD4-201ENST00000395740 TSHZ2Q9NRE2 1034 aa7.25□□□□□ -1.25
FGD4-201ENST00000395740 BCL11AQ9H165 835 aa7.24□□□□□ -1.25
FGD4-201ENST00000395740 FHAD1B1AJZ9 1412 aa7.24□□□□□ -1.25
FGD4-201ENST00000395740 AQRO60306 1485 aaKnown RBP eCLIP7.24□□□□□ -1.25
FGD4-201ENST00000395740 LRRC9Q6ZRR7 1453 aa7.23□□□□□ -1.25
FGD4-201ENST00000395740 CACNB1Q02641 598 aaPredicted RBP7.23□□□□□ -1.25
FGD4-201ENST00000395740 NESP48681 1621 aa7.22□□□□□ -1.25
FGD4-201ENST00000395740 EFCAB5A4FU69 1503 aa7.22□□□□□ -1.25
FGD4-201ENST00000395740 RAB3GAP2Q9H2M9 1393 aa7.22□□□□□ -1.25
FGD4-201ENST00000395740 CADPSQ9ULU8 1353 aa7.22□□□□□ -1.25
FGD4-201ENST00000395740 KANK4Q5T7N3 995 aaPredicted RBP7.22□□□□□ -1.25
FGD4-201ENST00000395740 MAPK8IP2Q13387 824 aaPredicted RBP7.21□□□□□ -1.25
FGD4-201ENST00000395740 ERICH6BQ5W0A0 696 aa7.2□□□□□ -1.26
FGD4-201ENST00000395740 FYCO1Q9BQS8 1478 aa7.19□□□□□ -1.26
FGD4-201ENST00000395740 WDR97A6NE52 1622 aa7.19□□□□□ -1.26
FGD4-201ENST00000395740 PPP1R15AO75807 674 aaPredicted RBP7.18□□□□□ -1.26
FGD4-201ENST00000395740 HOXD11P31277 338 aaPredicted RBP7.18□□□□□ -1.26
FGD4-201ENST00000395740 RANGAP1P46060 587 aaPredicted RBP7.18□□□□□ -1.26
FGD4-201ENST00000395740 IFFO2Q5TF58 517 aa7.18□□□□□ -1.26
FGD4-201ENST00000395740 IGF1RP08069 1367 aa7.17□□□□□ -1.26
FGD4-201ENST00000395740 CUL7Q14999 1698 aa7.17□□□□□ -1.26
FGD4-201ENST00000395740 CTTNBP2Q8WZ74 1663 aa7.17□□□□□ -1.26
FGD4-201ENST00000395740 THOC2Q8NI27 1593 aaKnown RBP7.17□□□□□ -1.26
FGD4-201ENST00000395740 KIF21AQ7Z4S6 1674 aa7.17□□□□□ -1.26
FGD4-201ENST00000395740 FGD5Q6ZNL6 1462 aa7.16□□□□□ -1.26
FGD4-201ENST00000395740 MYT1LQ9UL68 1186 aa7.15□□□□□ -1.26
FGD4-201ENST00000395740 CASKIN1Q8WXD9 1431 aa7.15□□□□□ -1.26
FGD4-201ENST00000395740 PCF11O94913 1555 aaKnown RBP7.15□□□□□ -1.26
FGD4-201ENST00000395740 NEFLP07196 543 aa7.15□□□□□ -1.26
FGD4-201ENST00000395740 AMER1Q5JTC6 1135 aaPredicted RBP7.15□□□□□ -1.26
FGD4-201ENST00000395740 ATXN8OSP0DMR3 200 aa7.14□□□□□ -1.27
FGD4-201ENST00000395740 CARMIL1Q5VZK9 1371 aa7.14□□□□□ -1.27
FGD4-201ENST00000395740 FANCD2Q9BXW9 1451 aa7.14□□□□□ -1.27
FGD4-201ENST00000395740 DMRT2Q9Y5R5 561 aa7.14□□□□□ -1.27
FGD4-201ENST00000395740 SPATA31D1Q6ZQQ2 1576 aa7.13□□□□□ -1.27
FGD4-201ENST00000395740 PHLDB1Q86UU1 1377 aa7.13□□□□□ -1.27
FGD4-201ENST00000395740 FANCIQ9NVI1 1328 aa7.13□□□□□ -1.27
FGD4-201ENST00000395740 POLR1AO95602 1720 aaPredicted RBP7.13□□□□□ -1.27
FGD4-201ENST00000395740 UACAQ9BZF9 1416 aa7.13□□□□□ -1.27
FGD4-201ENST00000395740 ANP32CO43423 234 aa7.12□□□□□ -1.27
FGD4-201ENST00000395740 HFM1A2PYH4 1435 aa7.12□□□□□ -1.27
FGD4-201ENST00000395740 AKNAQ7Z591 1439 aa7.11□□□□□ -1.27
FGD4-201ENST00000395740 GCC2Q8IWJ2 1684 aa7.11□□□□□ -1.27
FGD4-201ENST00000395740 PTPN23Q9H3S7 1636 aa7.11□□□□□ -1.27
FGD4-201ENST00000395740 ABCA10Q8WWZ4 1543 aa7.11□□□□□ -1.27
FGD4-201ENST00000395740 FMN1Q68DA7 1419 aa7.11□□□□□ -1.27
FGD4-201ENST00000395740 PRKCSHP14314 528 aaPredicted RBP7.11□□□□□ -1.27
FGD4-201ENST00000395740 DNMBPQ6XZF7 1577 aa7.1□□□□□ -1.27
FGD4-201ENST00000395740 CCDC18Q5T9S5 1454 aa7.1□□□□□ -1.27
FGD4-201ENST00000395740 FKBP8Q14318 412 aa7.1□□□□□ -1.27
FGD4-201ENST00000395740 HECW1Q76N89 1606 aa7.1□□□□□ -1.27
FGD4-201ENST00000395740 SAMD9Q5K651 1589 aa7.1□□□□□ -1.27
FGD4-201ENST00000395740 RAD54L2Q9Y4B4 1467 aa7.1□□□□□ -1.27
FGD4-201ENST00000395740 SLC4A2P04920 1241 aa7.1□□□□□ -1.27
FGD4-201ENST00000395740 RBM19Q9Y4C8 960 aaKnown RBP7.1□□□□□ -1.27
FGD4-201ENST00000395740 SLC24A1O60721 1099 aa7.09□□□□□ -1.27
FGD4-201ENST00000395740 FGD6Q6ZV73 1430 aa7.09□□□□□ -1.27
FGD4-201ENST00000395740 SUPT6HQ7KZ85 1726 aaKnown RBP7.09□□□□□ -1.27
FGD4-201ENST00000395740 ILDR2Q71H61 639 aa7.08□□□□□ -1.28
FGD4-201ENST00000395740 NCOA2Q15596 1464 aa7.08□□□□□ -1.28
FGD4-201ENST00000395740 ARHGEF11O15085 1522 aa7.08□□□□□ -1.28
FGD4-201ENST00000395740 KDM5BQ9UGL1 1544 aa7.08□□□□□ -1.28
FGD4-201ENST00000395740 ABCA5Q8WWZ7 1642 aa7.08□□□□□ -1.28
FGD4-201ENST00000395740 DDX10Q13206 875 aaKnown RBP7.08□□□□□ -1.28
FGD4-201ENST00000395740 EHBP1L1Q8N3D4 1523 aa7.08□□□□□ -1.28
FGD4-201ENST00000395740 TCOF1Q13428 1488 aaKnown RBP7.07□□□□□ -1.28
FGD4-201ENST00000395740 SNAPC4Q5SXM2 1469 aa7.07□□□□□ -1.28
FGD4-201ENST00000395740 MYCNP04198 464 aaPredicted RBP7.07□□□□□ -1.28
FGD4-201ENST00000395740 TONSLQ96HA7 1378 aa7.07□□□□□ -1.28
FGD4-201ENST00000395740 URB2Q14146 1524 aaKnown RBP7.07□□□□□ -1.28
FGD4-201ENST00000395740 TOPBP1Q92547 1522 aa7.07□□□□□ -1.28
FGD4-201ENST00000395740 RTN4Q9NQC3 1192 aaKnown RBP7.06□□□□□ -1.28
FGD4-201ENST00000395740 POLA1P09884 1462 aaPredicted RBP7.06□□□□□ -1.28
FGD4-201ENST00000395740 LRRIQ1Q96JM4 1722 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms