RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 CUL7Q14999 1698 aa18.15■□□□□ 0.5
PHACTR3-205ENST00000395636 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.49
PHACTR3-205ENST00000395636 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
PHACTR3-205ENST00000395636 GTF3C3Q9Y5Q9 886 aa18.12■□□□□ 0.49
PHACTR3-205ENST00000395636 EIF4G3O43432 1585 aaKnown RBP18.11■□□□□ 0.49
PHACTR3-205ENST00000395636 ARAP1Q96P48 1450 aa18.08■□□□□ 0.48
PHACTR3-205ENST00000395636 GRIN2BQ13224 1484 aa18.07■□□□□ 0.48
PHACTR3-205ENST00000395636 ARHGAP35Q9NRY4 1499 aa18.07■□□□□ 0.48
PHACTR3-205ENST00000395636 ADAMTS12P58397 1594 aa18.04■□□□□ 0.48
PHACTR3-205ENST00000395636 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
PHACTR3-205ENST00000395636 SNAPC4Q5SXM2 1469 aa18.04■□□□□ 0.48
PHACTR3-205ENST00000395636 VPS8Q8N3P4 1428 aa18.03■□□□□ 0.48
PHACTR3-205ENST00000395636 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.47
PHACTR3-205ENST00000395636 CTTNBP2Q8WZ74 1663 aa18.01■□□□□ 0.47
PHACTR3-205ENST00000395636 FBLN2P98095 1184 aa17.95■□□□□ 0.46
PHACTR3-205ENST00000395636 FHOD3Q2V2M9 1422 aa17.93■□□□□ 0.46
PHACTR3-205ENST00000395636 GRIN2AQ12879 1464 aa17.89■□□□□ 0.46
PHACTR3-205ENST00000395636 CHMP7Q8WUX9 453 aaPredicted RBP17.89■□□□□ 0.45
PHACTR3-205ENST00000395636 MAGI1Q96QZ7 1491 aaPredicted RBP17.89■□□□□ 0.45
PHACTR3-205ENST00000395636 SYNJ2O15056 1496 aa17.86■□□□□ 0.45
PHACTR3-205ENST00000395636 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
PHACTR3-205ENST00000395636 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
PHACTR3-205ENST00000395636 IQGAP2Q13576 1575 aa17.84■□□□□ 0.45
PHACTR3-205ENST00000395636 APLP2Q06481 763 aa17.83■□□□□ 0.45
PHACTR3-205ENST00000395636 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.45
PHACTR3-205ENST00000395636 CEP170Q5SW79 1584 aa17.83■□□□□ 0.45
PHACTR3-205ENST00000395636 SAMD9Q5K651 1589 aa17.83■□□□□ 0.44
PHACTR3-205ENST00000395636 ATP1B4Q9UN42 357 aaPredicted RBP17.82■□□□□ 0.44
PHACTR3-205ENST00000395636 EFCAB5A4FU69 1503 aa17.82■□□□□ 0.44
PHACTR3-205ENST00000395636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
PHACTR3-205ENST00000395636 PCF11O94913 1555 aaKnown RBP17.8■□□□□ 0.44
PHACTR3-205ENST00000395636 KIAA0586Q9BVV6 1533 aa17.77■□□□□ 0.44
PHACTR3-205ENST00000395636 CHD1O14646 1710 aa17.75■□□□□ 0.43
PHACTR3-205ENST00000395636 NUP160Q12769 1436 aa17.73■□□□□ 0.43
PHACTR3-205ENST00000395636 DISP1Q96F81 1524 aa17.72■□□□□ 0.43
PHACTR3-205ENST00000395636 UGGT2Q9NYU1 1516 aa17.72■□□□□ 0.43
PHACTR3-205ENST00000395636 DIEXFQ68CQ4 756 aaKnown RBP17.71■□□□□ 0.43
PHACTR3-205ENST00000395636 LRRIQ1Q96JM4 1722 aa17.7■□□□□ 0.42
PHACTR3-205ENST00000395636 TIAM1Q13009 1591 aa17.7■□□□□ 0.42
PHACTR3-205ENST00000395636 FMN1Q68DA7 1419 aa17.69■□□□□ 0.42
PHACTR3-205ENST00000395636 CASKIN1Q8WXD9 1431 aa17.69■□□□□ 0.42
PHACTR3-205ENST00000395636 ARID3CA6NKF2 412 aa17.68■□□□□ 0.42
PHACTR3-205ENST00000395636 JPH4Q96JJ6 628 aa17.68■□□□□ 0.42
PHACTR3-205ENST00000395636 FYCO1Q9BQS8 1478 aa17.67■□□□□ 0.42
PHACTR3-205ENST00000395636 KIAA0556O60303 1618 aa17.67■□□□□ 0.42
PHACTR3-205ENST00000395636 CFAP43Q8NDM7 1665 aa17.63■□□□□ 0.41
PHACTR3-205ENST00000395636 LRRC9Q6ZRR7 1453 aa17.63■□□□□ 0.41
PHACTR3-205ENST00000395636 ANP32EQ9BTT0 268 aa17.62■□□□□ 0.41
PHACTR3-205ENST00000395636 MAP3K1Q13233 1512 aa17.59■□□□□ 0.41
PHACTR3-205ENST00000395636 HNRNPUL2Q1KMD3 747 aaKnown RBP17.59■□□□□ 0.41
PHACTR3-205ENST00000395636 CDK13Q14004 1512 aaKnown RBP17.56■□□□□ 0.4
PHACTR3-205ENST00000395636 PRG4Q92954 1404 aaPredicted RBP17.56■□□□□ 0.4
PHACTR3-205ENST00000395636 PHLDB1Q86UU1 1377 aa17.55■□□□□ 0.4
PHACTR3-205ENST00000395636 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
PHACTR3-205ENST00000395636 MAGI3Q5TCQ9 1506 aa17.55■□□□□ 0.4
PHACTR3-205ENST00000395636 ERCC6L2Q5T890 1561 aa17.54■□□□□ 0.4
PHACTR3-205ENST00000395636 EPRSP07814 1512 aaKnown RBP17.52■□□□□ 0.4
PHACTR3-205ENST00000395636 CARMIL2Q6F5E8 1435 aa17.52■□□□□ 0.4
PHACTR3-205ENST00000395636 HECW1Q76N89 1606 aa17.51■□□□□ 0.39
PHACTR3-205ENST00000395636 PRKCSHP14314 528 aaPredicted RBP17.51■□□□□ 0.39
PHACTR3-205ENST00000395636 NUP153P49790 1475 aaKnown RBP17.51■□□□□ 0.39
PHACTR3-205ENST00000395636 MTUS2Q5JR59 1369 aa17.5■□□□□ 0.39
PHACTR3-205ENST00000395636 RAPGEF6Q8TEU7 1601 aa17.5■□□□□ 0.39
PHACTR3-205ENST00000395636 ITGAEP38570 1179 aa17.48■□□□□ 0.39
PHACTR3-205ENST00000395636 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
PHACTR3-205ENST00000395636 SHROOM2Q13796 1616 aa17.48■□□□□ 0.39
PHACTR3-205ENST00000395636 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
PHACTR3-205ENST00000395636 CCNB3Q8WWL7 1395 aa17.46■□□□□ 0.39
PHACTR3-205ENST00000395636 ERICH6Q7L0X2 663 aa17.45■□□□□ 0.38
PHACTR3-205ENST00000395636 CCDC18Q5T9S5 1454 aa17.44■□□□□ 0.38
PHACTR3-205ENST00000395636 CLSPNQ9HAW4 1339 aa17.44■□□□□ 0.38
PHACTR3-205ENST00000395636 PTPRGP23470 1445 aa17.42■□□□□ 0.38
PHACTR3-205ENST00000395636 NCOA2Q15596 1464 aa17.42■□□□□ 0.38
PHACTR3-205ENST00000395636 FAM50AQ14320 339 aaKnown RBP17.41■□□□□ 0.38
PHACTR3-205ENST00000395636 ABCA8O94911 1581 aa17.4■□□□□ 0.38
PHACTR3-205ENST00000395636 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
PHACTR3-205ENST00000395636 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
PHACTR3-205ENST00000395636 ATP10BO94823 1461 aa17.35■□□□□ 0.37
PHACTR3-205ENST00000395636 FGD6Q6ZV73 1430 aa17.34■□□□□ 0.37
PHACTR3-205ENST00000395636 ARHGEF11O15085 1522 aa17.34■□□□□ 0.37
PHACTR3-205ENST00000395636 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
PHACTR3-205ENST00000395636 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
PHACTR3-205ENST00000395636 MYOM3Q5VTT5 1437 aa17.32■□□□□ 0.36
PHACTR3-205ENST00000395636 YTHDC1Q96MU7 727 aaKnown RBP17.32■□□□□ 0.36
PHACTR3-205ENST00000395636 KIF14Q15058 1648 aa17.3■□□□□ 0.36
PHACTR3-205ENST00000395636 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
PHACTR3-205ENST00000395636 CDK11AQ9UQ88 783 aaPredicted RBP17.28■□□□□ 0.36
PHACTR3-205ENST00000395636 TROQ12816 1431 aaPredicted RBP17.27■□□□□ 0.36
PHACTR3-205ENST00000395636 DHX57Q6P158 1386 aaKnown RBP17.26■□□□□ 0.35
PHACTR3-205ENST00000395636 PTPRKQ15262 1439 aa17.26■□□□□ 0.35
PHACTR3-205ENST00000395636 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
PHACTR3-205ENST00000395636 PTPN23Q9H3S7 1636 aa17.25■□□□□ 0.35
PHACTR3-205ENST00000395636 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
PHACTR3-205ENST00000395636 ABCC2Q92887 1545 aa17.23■□□□□ 0.35
PHACTR3-205ENST00000395636 TSHZ2Q9NRE2 1034 aa17.23■□□□□ 0.35
PHACTR3-205ENST00000395636 ADCY10Q96PN6 1610 aa17.19■□□□□ 0.34
PHACTR3-205ENST00000395636 CHIC2Q9UKJ5 165 aa17.18■□□□□ 0.34
PHACTR3-205ENST00000395636 RAB3GAP2Q9H2M9 1393 aa17.18■□□□□ 0.34
PHACTR3-205ENST00000395636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.18■□□□□ 0.34
PHACTR3-205ENST00000395636 GPATCH8Q9UKJ3 1502 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms