RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 CEP170Q5SW79 1584 aa19.58■□□□□ 0.73
CNIH1-202ENST00000395573 ERICH3Q5RHP9 1530 aa19.57■□□□□ 0.72
CNIH1-202ENST00000395573 TRHP20396 242 aaPredicted RBP19.56■□□□□ 0.72
CNIH1-202ENST00000395573 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
CNIH1-202ENST00000395573 SHROOM2Q13796 1616 aa19.52■□□□□ 0.72
CNIH1-202ENST00000395573 ERCC6L2Q5T890 1561 aa19.52■□□□□ 0.71
CNIH1-202ENST00000395573 NUP160Q12769 1436 aa19.51■□□□□ 0.71
CNIH1-202ENST00000395573 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
CNIH1-202ENST00000395573 CUL7Q14999 1698 aa19.39■□□□□ 0.69
CNIH1-202ENST00000395573 KIF13AQ9H1H9 1805 aa19.33■□□□□ 0.69
CNIH1-202ENST00000395573 PRG4Q92954 1404 aaPredicted RBP19.32■□□□□ 0.68
CNIH1-202ENST00000395573 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
CNIH1-202ENST00000395573 JPH4Q96JJ6 628 aa19.26■□□□□ 0.67
CNIH1-202ENST00000395573 IGF1RP08069 1367 aa19.23■□□□□ 0.67
CNIH1-202ENST00000395573 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
CNIH1-202ENST00000395573 ADCY10Q96PN6 1610 aa19.19■□□□□ 0.66
CNIH1-202ENST00000395573 CARMIL1Q5VZK9 1371 aa19.14■□□□□ 0.65
CNIH1-202ENST00000395573 IQGAP2Q13576 1575 aa19.13■□□□□ 0.65
CNIH1-202ENST00000395573 MAPKBP1O60336 1514 aa19.11■□□□□ 0.65
CNIH1-202ENST00000395573 TSPOAP1O95153 1857 aa19.11■□□□□ 0.65
CNIH1-202ENST00000395573 DIP2BQ9P265 1576 aa19.09■□□□□ 0.65
CNIH1-202ENST00000395573 NPM1P06748 294 aaKnown RBP eCLIP19.07■□□□□ 0.64
CNIH1-202ENST00000395573 CTTNBP2Q8WZ74 1663 aa19.07■□□□□ 0.64
CNIH1-202ENST00000395573 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
CNIH1-202ENST00000395573 ABCC10Q5T3U5 1492 aa19.04■□□□□ 0.64
CNIH1-202ENST00000395573 CARMIL2Q6F5E8 1435 aa19.03■□□□□ 0.64
CNIH1-202ENST00000395573 RAPGEF2Q9Y4G8 1499 aa19.01■□□□□ 0.63
CNIH1-202ENST00000395573 PTPRGP23470 1445 aa19■□□□□ 0.63
CNIH1-202ENST00000395573 FAM69CQ0P6D2 419 aa18.99■□□□□ 0.63
CNIH1-202ENST00000395573 TTBK1Q5TCY1 1321 aaPredicted RBP18.99■□□□□ 0.63
CNIH1-202ENST00000395573 TNIKQ9UKE5 1360 aa18.98■□□□□ 0.63
CNIH1-202ENST00000395573 MAPK8IP2Q13387 824 aaPredicted RBP18.97■□□□□ 0.63
CNIH1-202ENST00000395573 DISP1Q96F81 1524 aa18.96■□□□□ 0.63
CNIH1-202ENST00000395573 KIAA0556O60303 1618 aa18.95■□□□□ 0.62
CNIH1-202ENST00000395573 UGGT2Q9NYU1 1516 aa18.95■□□□□ 0.62
CNIH1-202ENST00000395573 ABCC2Q92887 1545 aa18.94■□□□□ 0.62
CNIH1-202ENST00000395573 KDM6BO15054 1643 aa18.92■□□□□ 0.62
CNIH1-202ENST00000395573 ZCCHC11Q5TAX3 1644 aaKnown RBP18.9■□□□□ 0.62
CNIH1-202ENST00000395573 UHRF1BP1LA0JNW5 1464 aa18.9■□□□□ 0.62
CNIH1-202ENST00000395573 PPRC1Q5VV67 1664 aaKnown RBP18.89■□□□□ 0.61
CNIH1-202ENST00000395573 UACAQ9BZF9 1416 aa18.87■□□□□ 0.61
CNIH1-202ENST00000395573 ASXL2Q76L83 1435 aa18.86■□□□□ 0.61
CNIH1-202ENST00000395573 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
CNIH1-202ENST00000395573 GLI2P10070 1586 aa18.85■□□□□ 0.61
CNIH1-202ENST00000395573 PLB1Q6P1J6 1458 aa18.84■□□□□ 0.61
CNIH1-202ENST00000395573 KDM5BQ9UGL1 1544 aa18.82■□□□□ 0.6
CNIH1-202ENST00000395573 MAP3K4Q9Y6R4 1608 aa18.82■□□□□ 0.6
CNIH1-202ENST00000395573 GOLGA3Q08378 1498 aa18.8■□□□□ 0.6
CNIH1-202ENST00000395573 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
CNIH1-202ENST00000395573 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
CNIH1-202ENST00000395573 EPRSP07814 1512 aaKnown RBP18.75■□□□□ 0.59
CNIH1-202ENST00000395573 ABCA8O94911 1581 aa18.73■□□□□ 0.59
CNIH1-202ENST00000395573 CFAP43Q8NDM7 1665 aa18.72■□□□□ 0.59
CNIH1-202ENST00000395573 WDR7Q9Y4E6 1490 aa18.7■□□□□ 0.58
CNIH1-202ENST00000395573 TEX14Q8IWB6 1497 aa18.68■□□□□ 0.58
CNIH1-202ENST00000395573 SAMD9Q5K651 1589 aa18.67■□□□□ 0.58
CNIH1-202ENST00000395573 CSRNP3Q8WYN3 585 aa18.61■□□□□ 0.57
CNIH1-202ENST00000395573 RAPGEF6Q8TEU7 1601 aa18.6■□□□□ 0.57
CNIH1-202ENST00000395573 EEA1Q15075 1411 aa18.6■□□□□ 0.57
CNIH1-202ENST00000395573 COL17A1Q9UMD9 1497 aaPredicted RBP18.58■□□□□ 0.57
CNIH1-202ENST00000395573 P3H3Q8IVL6 736 aa18.58■□□□□ 0.56
CNIH1-202ENST00000395573 FAM9AQ8IZU1 332 aaPredicted RBP18.58■□□□□ 0.56
CNIH1-202ENST00000395573 KDM4FA0A1W2PPD8 638 aa18.57■□□□□ 0.56
CNIH1-202ENST00000395573 KCNH8Q96L42 1107 aa18.56■□□□□ 0.56
CNIH1-202ENST00000395573 MAGI3Q5TCQ9 1506 aa18.55■□□□□ 0.56
CNIH1-202ENST00000395573 KIF21BO75037 1637 aa18.55■□□□□ 0.56
CNIH1-202ENST00000395573 CD109Q6YHK3 1445 aa18.55■□□□□ 0.56
CNIH1-202ENST00000395573 ABCA9Q8IUA7 1624 aa18.52■□□□□ 0.56
CNIH1-202ENST00000395573 ATP10BO94823 1461 aa18.52■□□□□ 0.56
CNIH1-202ENST00000395573 ADGRL1O94910 1474 aa18.52■□□□□ 0.56
CNIH1-202ENST00000395573 ARID3CA6NKF2 412 aa18.51■□□□□ 0.55
CNIH1-202ENST00000395573 RANGAP1P46060 587 aaPredicted RBP18.47■□□□□ 0.55
CNIH1-202ENST00000395573 EFCAB5A4FU69 1503 aa18.46■□□□□ 0.55
CNIH1-202ENST00000395573 FHOD3Q2V2M9 1422 aa18.46■□□□□ 0.55
CNIH1-202ENST00000395573 NUP153P49790 1475 aaKnown RBP18.45■□□□□ 0.54
CNIH1-202ENST00000395573 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
CNIH1-202ENST00000395573 ARAP3Q8WWN8 1544 aa18.42■□□□□ 0.54
CNIH1-202ENST00000395573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.4■□□□□ 0.54
CNIH1-202ENST00000395573 HNRNPUL2Q1KMD3 747 aaKnown RBP18.4■□□□□ 0.54
CNIH1-202ENST00000395573 CFAP74Q9C0B2 1584 aa18.36■□□□□ 0.53
CNIH1-202ENST00000395573 NEO1Q92859 1461 aa18.34■□□□□ 0.53
CNIH1-202ENST00000395573 RICTORQ6R327 1708 aa18.34■□□□□ 0.53
CNIH1-202ENST00000395573 FRMPD1Q5SYB0 1578 aa18.34■□□□□ 0.53
CNIH1-202ENST00000395573 PHLDB1Q86UU1 1377 aa18.33■□□□□ 0.53
CNIH1-202ENST00000395573 TTC37Q6PGP7 1564 aa18.33■□□□□ 0.52
CNIH1-202ENST00000395573 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
CNIH1-202ENST00000395573 HECW1Q76N89 1606 aa18.31■□□□□ 0.52
CNIH1-202ENST00000395573 CDK13Q14004 1512 aaKnown RBP18.31■□□□□ 0.52
CNIH1-202ENST00000395573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.3■□□□□ 0.52
CNIH1-202ENST00000395573 LRRIQ1Q96JM4 1722 aa18.3■□□□□ 0.52
CNIH1-202ENST00000395573 HECW2Q9P2P5 1572 aa18.3■□□□□ 0.52
CNIH1-202ENST00000395573 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
CNIH1-202ENST00000395573 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
CNIH1-202ENST00000395573 PLEKHD1A6NEE1 506 aa18.28■□□□□ 0.52
CNIH1-202ENST00000395573 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
CNIH1-202ENST00000395573 ADAMTSL3P82987 1691 aa18.27■□□□□ 0.52
CNIH1-202ENST00000395573 BCORL1Q5H9F3 1711 aa18.26■□□□□ 0.51
CNIH1-202ENST00000395573 RAPGEF3O95398 923 aa18.25■□□□□ 0.51
CNIH1-202ENST00000395573 ARHGAP35Q9NRY4 1499 aa18.25■□□□□ 0.51
CNIH1-202ENST00000395573 FMN1Q68DA7 1419 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms