RNA–Protein interactions for RNA: ENST00000395527.8

SPECC1-204, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPECC1, Length 3,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-204ENST00000395527 IFT140Q96RY7 1462 aa17.51■□□□□ 0.39
SPECC1-204ENST00000395527 ARAP1Q96P48 1450 aa17.48■□□□□ 0.39
SPECC1-204ENST00000395527 GRIN2BQ13224 1484 aa17.48■□□□□ 0.39
SPECC1-204ENST00000395527 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
SPECC1-204ENST00000395527 ERICH3Q5RHP9 1530 aa17.45■□□□□ 0.38
SPECC1-204ENST00000395527 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
SPECC1-204ENST00000395527 JPH4Q96JJ6 628 aa17.43■□□□□ 0.38
SPECC1-204ENST00000395527 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
SPECC1-204ENST00000395527 HRCP23327 699 aa17.41■□□□□ 0.38
SPECC1-204ENST00000395527 WDR62O43379 1518 aa17.39■□□□□ 0.37
SPECC1-204ENST00000395527 MTUS2Q5JR59 1369 aa17.35■□□□□ 0.37
SPECC1-204ENST00000395527 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
SPECC1-204ENST00000395527 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
SPECC1-204ENST00000395527 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
SPECC1-204ENST00000395527 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
SPECC1-204ENST00000395527 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.36
SPECC1-204ENST00000395527 KCNH8Q96L42 1107 aa17.27■□□□□ 0.36
SPECC1-204ENST00000395527 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.36
SPECC1-204ENST00000395527 GRIN2AQ12879 1464 aa17.25■□□□□ 0.35
SPECC1-204ENST00000395527 CUL7Q14999 1698 aa17.24■□□□□ 0.35
SPECC1-204ENST00000395527 FMN1Q68DA7 1419 aa17.23■□□□□ 0.35
SPECC1-204ENST00000395527 CDK11AQ9UQ88 783 aaPredicted RBP17.22■□□□□ 0.35
SPECC1-204ENST00000395527 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
SPECC1-204ENST00000395527 CARMIL2Q6F5E8 1435 aa17.17■□□□□ 0.34
SPECC1-204ENST00000395527 MAGI1Q96QZ7 1491 aaPredicted RBP17.17■□□□□ 0.34
SPECC1-204ENST00000395527 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
SPECC1-204ENST00000395527 PLEKHD1A6NEE1 506 aa17.16■□□□□ 0.34
SPECC1-204ENST00000395527 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
SPECC1-204ENST00000395527 KIAA0586Q9BVV6 1533 aa17.15■□□□□ 0.34
SPECC1-204ENST00000395527 WDR97A6NE52 1622 aa17.15■□□□□ 0.34
SPECC1-204ENST00000395527 PRG4Q92954 1404 aaPredicted RBP17.15■□□□□ 0.34
SPECC1-204ENST00000395527 IQGAP2Q13576 1575 aa17.14■□□□□ 0.33
SPECC1-204ENST00000395527 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
SPECC1-204ENST00000395527 MYT1LQ9UL68 1186 aa17.14■□□□□ 0.33
SPECC1-204ENST00000395527 RRP7BPQ9NSQ0 103 aa17.13■□□□□ 0.33
SPECC1-204ENST00000395527 CCNB3Q8WWL7 1395 aa17.13■□□□□ 0.33
SPECC1-204ENST00000395527 PTPRGP23470 1445 aa17.12■□□□□ 0.33
SPECC1-204ENST00000395527 PHLDB1Q86UU1 1377 aa17.11■□□□□ 0.33
SPECC1-204ENST00000395527 ZEB1P37275 1124 aaPredicted RBP17.09■□□□□ 0.33
SPECC1-204ENST00000395527 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
SPECC1-204ENST00000395527 CASKIN1Q8WXD9 1431 aa17.09■□□□□ 0.33
SPECC1-204ENST00000395527 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.33
SPECC1-204ENST00000395527 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
SPECC1-204ENST00000395527 PLB1Q6P1J6 1458 aa17.08■□□□□ 0.32
SPECC1-204ENST00000395527 CFDP1Q9UEE9 299 aaPredicted RBP17.07■□□□□ 0.32
SPECC1-204ENST00000395527 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
SPECC1-204ENST00000395527 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
SPECC1-204ENST00000395527 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
SPECC1-204ENST00000395527 ZNF644Q9H582 1327 aaPredicted RBP17.05■□□□□ 0.32
SPECC1-204ENST00000395527 CYB5RLQ6IPT4 315 aa17.03■□□□□ 0.32
SPECC1-204ENST00000395527 NPM1P06748 294 aaKnown RBP eCLIP17.03■□□□□ 0.32
SPECC1-204ENST00000395527 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
SPECC1-204ENST00000395527 CEP170Q5SW79 1584 aa17.02■□□□□ 0.31
SPECC1-204ENST00000395527 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
SPECC1-204ENST00000395527 TIAM1Q13009 1591 aa16.99■□□□□ 0.31
SPECC1-204ENST00000395527 DISP1Q96F81 1524 aa16.98■□□□□ 0.31
SPECC1-204ENST00000395527 NUP160Q12769 1436 aa16.97■□□□□ 0.31
SPECC1-204ENST00000395527 EPRSP07814 1512 aaKnown RBP16.94■□□□□ 0.3
SPECC1-204ENST00000395527 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
SPECC1-204ENST00000395527 HNRNPMP52272 730 aaKnown RBP eCLIP16.92■□□□□ 0.3
SPECC1-204ENST00000395527 UGGT2Q9NYU1 1516 aa16.9■□□□□ 0.3
SPECC1-204ENST00000395527 SIN3AQ96ST3 1273 aa16.88■□□□□ 0.29
SPECC1-204ENST00000395527 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
SPECC1-204ENST00000395527 RAB3GAP2Q9H2M9 1393 aa16.88■□□□□ 0.29
SPECC1-204ENST00000395527 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
SPECC1-204ENST00000395527 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
SPECC1-204ENST00000395527 FGD6Q6ZV73 1430 aa16.87■□□□□ 0.29
SPECC1-204ENST00000395527 NUP153P49790 1475 aaKnown RBP16.87■□□□□ 0.29
SPECC1-204ENST00000395527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
SPECC1-204ENST00000395527 CCDC18Q5T9S5 1454 aa16.87■□□□□ 0.29
SPECC1-204ENST00000395527 SAMD9Q5K651 1589 aa16.87■□□□□ 0.29
SPECC1-204ENST00000395527 FOXD1Q16676 465 aa16.85■□□□□ 0.29
SPECC1-204ENST00000395527 CHD1O14646 1710 aa16.85■□□□□ 0.29
SPECC1-204ENST00000395527 ERCC6L2Q5T890 1561 aa16.85■□□□□ 0.29
SPECC1-204ENST00000395527 MYOM3Q5VTT5 1437 aa16.84■□□□□ 0.29
SPECC1-204ENST00000395527 RRBP1Q9P2E9 1410 aaKnown RBP16.83■□□□□ 0.29
SPECC1-204ENST00000395527 UACAQ9BZF9 1416 aa16.82■□□□□ 0.28
SPECC1-204ENST00000395527 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
SPECC1-204ENST00000395527 SETD5Q9C0A6 1442 aa16.8■□□□□ 0.28
SPECC1-204ENST00000395527 ATP10BO94823 1461 aa16.79■□□□□ 0.28
SPECC1-204ENST00000395527 MAGI3Q5TCQ9 1506 aa16.79■□□□□ 0.28
SPECC1-204ENST00000395527 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.28
SPECC1-204ENST00000395527 ZNF326Q5BKZ1 582 aaKnown RBP16.76■□□□□ 0.27
SPECC1-204ENST00000395527 RAPGEF6Q8TEU7 1601 aa16.75■□□□□ 0.27
SPECC1-204ENST00000395527 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
SPECC1-204ENST00000395527 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
SPECC1-204ENST00000395527 HIRIP3Q9BW71 556 aaPredicted RBP16.74■□□□□ 0.27
SPECC1-204ENST00000395527 MAP3K1Q13233 1512 aa16.74■□□□□ 0.27
SPECC1-204ENST00000395527 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
SPECC1-204ENST00000395527 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
SPECC1-204ENST00000395527 PTPRKQ15262 1439 aa16.71■□□□□ 0.27
SPECC1-204ENST00000395527 EFCAB2Q5VUJ9 269 aa16.71■□□□□ 0.27
SPECC1-204ENST00000395527 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
SPECC1-204ENST00000395527 SUPT6HQ7KZ85 1726 aaKnown RBP16.68■□□□□ 0.26
SPECC1-204ENST00000395527 CFAP43Q8NDM7 1665 aa16.66■□□□□ 0.26
SPECC1-204ENST00000395527 MPHOSPH9Q99550 1183 aa16.63■□□□□ 0.25
SPECC1-204ENST00000395527 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
SPECC1-204ENST00000395527 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
SPECC1-204ENST00000395527 FAM69CQ0P6D2 419 aa16.62■□□□□ 0.25
SPECC1-204ENST00000395527 GPATCH8Q9UKJ3 1502 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms