RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 PRG4Q92954 1404 aaPredicted RBP39.64■■■■□ 3.94
PMS2P3-201ENST00000394921 TRHP20396 242 aaPredicted RBP39.64■■■■□ 3.94
PMS2P3-201ENST00000394921 CARMIL1Q5VZK9 1371 aa39.58■■■■□ 3.93
PMS2P3-201ENST00000394921 KIAA0586Q9BVV6 1533 aa39.55■■■■□ 3.92
PMS2P3-201ENST00000394921 RAPGEF2Q9Y4G8 1499 aa39.28■■■■□ 3.88
PMS2P3-201ENST00000394921 IQGAP2Q13576 1575 aa39.24■■■■□ 3.87
PMS2P3-201ENST00000394921 ADCY10Q96PN6 1610 aa39.15■■■■□ 3.86
PMS2P3-201ENST00000394921 CARMIL2Q6F5E8 1435 aa39.1■■■■□ 3.85
PMS2P3-201ENST00000394921 PTPRGP23470 1445 aa39.07■■■■□ 3.85
PMS2P3-201ENST00000394921 TNIKQ9UKE5 1360 aa39.06■■■■□ 3.84
PMS2P3-201ENST00000394921 DISP1Q96F81 1524 aa39.05■■■■□ 3.84
PMS2P3-201ENST00000394921 KIF13AQ9H1H9 1805 aa39.03■■■■□ 3.84
PMS2P3-201ENST00000394921 PRXQ9BXM0 1461 aa39.03■■■■□ 3.84
PMS2P3-201ENST00000394921 UGGT2Q9NYU1 1516 aa39.03■■■■□ 3.84
PMS2P3-201ENST00000394921 MAPKBP1O60336 1514 aa39■■■■□ 3.83
PMS2P3-201ENST00000394921 NPM1P06748 294 aaKnown RBP eCLIP39■■■■□ 3.83
PMS2P3-201ENST00000394921 TTBK1Q5TCY1 1321 aaPredicted RBP38.95■■■■□ 3.83
PMS2P3-201ENST00000394921 CTTNBP2Q8WZ74 1663 aa38.95■■■■□ 3.83
PMS2P3-201ENST00000394921 ABCC10Q5T3U5 1492 aa38.9■■■■□ 3.82
PMS2P3-201ENST00000394921 KIAA0556O60303 1618 aa38.89■■■■□ 3.82
PMS2P3-201ENST00000394921 DIP2BQ9P265 1576 aa38.84■■■■□ 3.81
PMS2P3-201ENST00000394921 UHRF1BP1LA0JNW5 1464 aa38.82■■■■□ 3.8
PMS2P3-201ENST00000394921 ABCC2Q92887 1545 aa38.82■■■■□ 3.8
PMS2P3-201ENST00000394921 FAM69CQ0P6D2 419 aa38.81■■■■□ 3.8
PMS2P3-201ENST00000394921 UACAQ9BZF9 1416 aa38.8■■■■□ 3.8
PMS2P3-201ENST00000394921 CSRNP3Q8WYN3 585 aa38.8■■■■□ 3.8
PMS2P3-201ENST00000394921 EEA1Q15075 1411 aa38.72■■■■□ 3.79
PMS2P3-201ENST00000394921 GOLGA3Q08378 1498 aa38.7■■■■□ 3.79
PMS2P3-201ENST00000394921 KDM5BQ9UGL1 1544 aa38.65■■■■□ 3.78
PMS2P3-201ENST00000394921 ASXL2Q76L83 1435 aa38.64■■■■□ 3.78
PMS2P3-201ENST00000394921 PLB1Q6P1J6 1458 aa38.6■■■■□ 3.77
PMS2P3-201ENST00000394921 ZCCHC11Q5TAX3 1644 aaKnown RBP38.57■■■■□ 3.76
PMS2P3-201ENST00000394921 CHIC1Q5VXU3 224 aa38.53■■■■□ 3.76
PMS2P3-201ENST00000394921 TSPOAP1O95153 1857 aa38.53■■■■□ 3.76
PMS2P3-201ENST00000394921 ABCA8O94911 1581 aa38.52■■■■□ 3.76
PMS2P3-201ENST00000394921 FAM9AQ8IZU1 332 aaPredicted RBP38.52■■■■□ 3.76
PMS2P3-201ENST00000394921 GLI2P10070 1586 aa38.5■■■■□ 3.75
PMS2P3-201ENST00000394921 SAMD9Q5K651 1589 aa38.44■■■■□ 3.74
PMS2P3-201ENST00000394921 EPRSP07814 1512 aaKnown RBP38.42■■■■□ 3.74
PMS2P3-201ENST00000394921 KIF21BO75037 1637 aa38.41■■■■□ 3.74
PMS2P3-201ENST00000394921 P3H3Q8IVL6 736 aa38.4■■■■□ 3.74
PMS2P3-201ENST00000394921 PPRC1Q5VV67 1664 aaKnown RBP38.38■■■■□ 3.73
PMS2P3-201ENST00000394921 KDM6BO15054 1643 aa38.34■■■■□ 3.73
PMS2P3-201ENST00000394921 WDR7Q9Y4E6 1490 aa38.34■■■■□ 3.73
PMS2P3-201ENST00000394921 MAP3K4Q9Y6R4 1608 aa38.3■■■■□ 3.72
PMS2P3-201ENST00000394921 RANGAP1P46060 587 aaPredicted RBP38.21■■■■□ 3.71
PMS2P3-201ENST00000394921 ATP10BO94823 1461 aa38.19■■■■□ 3.7
PMS2P3-201ENST00000394921 FHOD3Q2V2M9 1422 aa38.18■■■■□ 3.7
PMS2P3-201ENST00000394921 RAPGEF6Q8TEU7 1601 aa38.17■■■■□ 3.7
PMS2P3-201ENST00000394921 ARID3CA6NKF2 412 aa38.14■■■■□ 3.7
PMS2P3-201ENST00000394921 EFCAB5A4FU69 1503 aa38.12■■■■□ 3.69
PMS2P3-201ENST00000394921 KCNH8Q96L42 1107 aa38.12■■■■□ 3.69
PMS2P3-201ENST00000394921 TEX14Q8IWB6 1497 aa38.11■■■■□ 3.69
PMS2P3-201ENST00000394921 CFAP43Q8NDM7 1665 aa38.08■■■■□ 3.69
PMS2P3-201ENST00000394921 COL17A1Q9UMD9 1497 aaPredicted RBP38.08■■■■□ 3.69
PMS2P3-201ENST00000394921 EHMT2Q96KQ7 1210 aa38.07■■■■□ 3.68
PMS2P3-201ENST00000394921 AEBP2Q6ZN18 517 aaPredicted RBP38.06■■■■□ 3.68
PMS2P3-201ENST00000394921 NUP153P49790 1475 aaKnown RBP38.05■■■■□ 3.68
PMS2P3-201ENST00000394921 CD109Q6YHK3 1445 aa38.04■■■■□ 3.68
PMS2P3-201ENST00000394921 UBTFP17480 764 aaKnown RBP38.03■■■■□ 3.68
PMS2P3-201ENST00000394921 MAGI3Q5TCQ9 1506 aa38.02■■■■□ 3.68
PMS2P3-201ENST00000394921 ABCA9Q8IUA7 1624 aa37.89■■■■□ 3.66
PMS2P3-201ENST00000394921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.88■■■■□ 3.66
PMS2P3-201ENST00000394921 HNRNPUL2Q1KMD3 747 aaKnown RBP37.88■■■■□ 3.66
PMS2P3-201ENST00000394921 ARHGAP35Q9NRY4 1499 aa37.87■■■■□ 3.65
PMS2P3-201ENST00000394921 KDM4FA0A1W2PPD8 638 aa37.78■■■■□ 3.64
PMS2P3-201ENST00000394921 FMN1Q68DA7 1419 aa37.75■■■■□ 3.63
PMS2P3-201ENST00000394921 PLEKHD1A6NEE1 506 aa37.74■■■■□ 3.63
PMS2P3-201ENST00000394921 CDK13Q14004 1512 aaKnown RBP37.72■■■■□ 3.63
PMS2P3-201ENST00000394921 ARAP3Q8WWN8 1544 aa37.71■■■■□ 3.63
PMS2P3-201ENST00000394921 HECW1Q76N89 1606 aa37.66■■■■□ 3.62
PMS2P3-201ENST00000394921 PHLDB1Q86UU1 1377 aa37.65■■■■□ 3.62
PMS2P3-201ENST00000394921 NEO1Q92859 1461 aa37.63■■■■□ 3.61
PMS2P3-201ENST00000394921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.61■■■■□ 3.614e-7■■□□□ 13.5
PMS2P3-201ENST00000394921 ADGRL1O94910 1474 aa37.58■■■■□ 3.61
PMS2P3-201ENST00000394921 ATP1B4Q9UN42 357 aaPredicted RBP37.57■■■■□ 3.6
PMS2P3-201ENST00000394921 TTC37Q6PGP7 1564 aa37.56■■■■□ 3.6
PMS2P3-201ENST00000394921 LRRIQ1Q96JM4 1722 aa37.51■■■■□ 3.6
PMS2P3-201ENST00000394921 RAPGEF3O95398 923 aa37.48■■■■□ 3.59
PMS2P3-201ENST00000394921 FRMPD1Q5SYB0 1578 aa37.47■■■■□ 3.59
PMS2P3-201ENST00000394921 FANCAO15360 1455 aa37.44■■■■□ 3.58
PMS2P3-201ENST00000394921 PCF11O94913 1555 aaKnown RBP37.44■■■■□ 3.58
PMS2P3-201ENST00000394921 AKNAQ7Z591 1439 aa37.43■■■■□ 3.58
PMS2P3-201ENST00000394921 CASKIN1Q8WXD9 1431 aa37.43■■■■□ 3.58
PMS2P3-201ENST00000394921 CFAP74Q9C0B2 1584 aa37.42■■■■□ 3.58
PMS2P3-201ENST00000394921 CDK11AQ9UQ88 783 aaPredicted RBP37.41■■■■□ 3.58
PMS2P3-201ENST00000394921 CLIP1P30622 1438 aa37.41■■■■□ 3.58
PMS2P3-201ENST00000394921 TROQ12816 1431 aaPredicted RBP37.38■■■■□ 3.58
PMS2P3-201ENST00000394921 KIF14Q15058 1648 aa37.37■■■■□ 3.57
PMS2P3-201ENST00000394921 PLCH2O75038 1416 aa37.37■■■■□ 3.57
PMS2P3-201ENST00000394921 DENND4BO75064 1496 aaPredicted RBP37.36■■■■□ 3.57
PMS2P3-201ENST00000394921 RICTORQ6R327 1708 aa37.35■■■■□ 3.57
PMS2P3-201ENST00000394921 CCDC18Q5T9S5 1454 aa37.31■■■■□ 3.56
PMS2P3-201ENST00000394921 MYO5CQ9NQX4 1742 aa37.3■■■■□ 3.56
PMS2P3-201ENST00000394921 FYCO1Q9BQS8 1478 aa37.29■■■■□ 3.56
PMS2P3-201ENST00000394921 ARHGEF40Q8TER5 1519 aa37.22■■■■□ 3.55
PMS2P3-201ENST00000394921 ZMYM4Q5VZL5 1548 aa37.21■■■■□ 3.55
PMS2P3-201ENST00000394921 SCAPERQ9BY12 1400 aa37.19■■■■□ 3.54
PMS2P3-201ENST00000394921 EFCAB2Q5VUJ9 269 aa37.19■■■■□ 3.54
PMS2P3-201ENST00000394921 POGZQ7Z3K3 1410 aa37.16■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms