RNA–Protein interactions for RNA: ENST00000394906.6

FLOT2-201, Transcript of flotillin 2, humanhuman

TSL 5 BASIC

Gene FLOT2, Length 2,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT2-201ENST00000394906 CUL7Q14999 1698 aa23.17■■□□□ 1.3
FLOT2-201ENST00000394906 TIAM1Q13009 1591 aa23.16■■□□□ 1.3
FLOT2-201ENST00000394906 CCNB3Q8WWL7 1395 aa23.16■■□□□ 1.3
FLOT2-201ENST00000394906 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
FLOT2-201ENST00000394906 FAM50AQ14320 339 aaKnown RBP23.14■■□□□ 1.3
FLOT2-201ENST00000394906 DIEXFQ68CQ4 756 aaKnown RBP23.13■■□□□ 1.29
FLOT2-201ENST00000394906 RRBP1Q9P2E9 1410 aaKnown RBP23.13■■□□□ 1.29
FLOT2-201ENST00000394906 CTTNBP2Q8WZ74 1663 aa23.11■■□□□ 1.29
FLOT2-201ENST00000394906 PHLDB1Q86UU1 1377 aa23.11■■□□□ 1.29
FLOT2-201ENST00000394906 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
FLOT2-201ENST00000394906 LRRC9Q6ZRR7 1453 aa23.1■■□□□ 1.29
FLOT2-201ENST00000394906 TARBP1Q13395 1621 aaKnown RBP23.09■■□□□ 1.29
FLOT2-201ENST00000394906 ARID3CA6NKF2 412 aa23.06■■□□□ 1.28
FLOT2-201ENST00000394906 DHX57Q6P158 1386 aaKnown RBP23.05■■□□□ 1.28
FLOT2-201ENST00000394906 MRC2Q9UBG0 1479 aa23.04■■□□□ 1.28
FLOT2-201ENST00000394906 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
FLOT2-201ENST00000394906 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
FLOT2-201ENST00000394906 EFCAB5A4FU69 1503 aa22.99■■□□□ 1.27
FLOT2-201ENST00000394906 CASKIN1Q8WXD9 1431 aa22.97■■□□□ 1.27
FLOT2-201ENST00000394906 PBRM1Q86U86 1689 aa22.96■■□□□ 1.27
FLOT2-201ENST00000394906 CFAP43Q8NDM7 1665 aa22.96■■□□□ 1.27
FLOT2-201ENST00000394906 FYCO1Q9BQS8 1478 aa22.95■■□□□ 1.26
FLOT2-201ENST00000394906 ERCC6Q03468 1493 aa22.95■■□□□ 1.26
FLOT2-201ENST00000394906 MAP3K1Q13233 1512 aa22.94■■□□□ 1.26
FLOT2-201ENST00000394906 RAB3GAP2Q9H2M9 1393 aa22.93■■□□□ 1.26
FLOT2-201ENST00000394906 FMN1Q68DA7 1419 aa22.93■■□□□ 1.26
FLOT2-201ENST00000394906 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
FLOT2-201ENST00000394906 MTUS2Q5JR59 1369 aa22.9■■□□□ 1.26
FLOT2-201ENST00000394906 FBLN2P98095 1184 aa22.88■■□□□ 1.25
FLOT2-201ENST00000394906 SAMD9Q5K651 1589 aa22.87■■□□□ 1.25
FLOT2-201ENST00000394906 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
FLOT2-201ENST00000394906 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
FLOT2-201ENST00000394906 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
FLOT2-201ENST00000394906 IFT140Q96RY7 1462 aa22.81■■□□□ 1.24
FLOT2-201ENST00000394906 WDR62O43379 1518 aa22.81■■□□□ 1.24
FLOT2-201ENST00000394906 SETD5Q9C0A6 1442 aa22.8■■□□□ 1.24
FLOT2-201ENST00000394906 NEUROD1Q13562 356 aa22.79■■□□□ 1.24
FLOT2-201ENST00000394906 IQGAP2Q13576 1575 aa22.79■■□□□ 1.24
FLOT2-201ENST00000394906 SIN3AQ96ST3 1273 aa22.78■■□□□ 1.24
FLOT2-201ENST00000394906 YTHDC1Q96MU7 727 aaKnown RBP22.77■■□□□ 1.24
FLOT2-201ENST00000394906 MIER1Q8N108 512 aa22.75■■□□□ 1.23
FLOT2-201ENST00000394906 FGD6Q6ZV73 1430 aa22.75■■□□□ 1.23
FLOT2-201ENST00000394906 EIF4G3O43432 1585 aaKnown RBP22.74■■□□□ 1.23
FLOT2-201ENST00000394906 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
FLOT2-201ENST00000394906 MAGI3Q5TCQ9 1506 aa22.73■■□□□ 1.23
FLOT2-201ENST00000394906 NCOA2Q15596 1464 aa22.73■■□□□ 1.23
FLOT2-201ENST00000394906 CHMP7Q8WUX9 453 aaPredicted RBP22.72■■□□□ 1.23
FLOT2-201ENST00000394906 CDK13Q14004 1512 aaKnown RBP22.72■■□□□ 1.23
FLOT2-201ENST00000394906 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
FLOT2-201ENST00000394906 MAPKBP1O60336 1514 aa22.7■■□□□ 1.22
FLOT2-201ENST00000394906 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
FLOT2-201ENST00000394906 PTPRKQ15262 1439 aa22.69■■□□□ 1.22
FLOT2-201ENST00000394906 THOC2Q8NI27 1593 aaKnown RBP22.66■■□□□ 1.22
FLOT2-201ENST00000394906 GRIN2AQ12879 1464 aa22.64■■□□□ 1.22
FLOT2-201ENST00000394906 RRP7BPQ9NSQ0 103 aa22.63■■□□□ 1.21
FLOT2-201ENST00000394906 MYOM3Q5VTT5 1437 aa22.63■■□□□ 1.21
FLOT2-201ENST00000394906 EPRSP07814 1512 aaKnown RBP22.63■■□□□ 1.21
FLOT2-201ENST00000394906 SUPT6HQ7KZ85 1726 aaKnown RBP22.61■■□□□ 1.21
FLOT2-201ENST00000394906 EHBP1L1Q8N3D4 1523 aa22.59■■□□□ 1.21
FLOT2-201ENST00000394906 HECW1Q76N89 1606 aa22.59■■□□□ 1.21
FLOT2-201ENST00000394906 DISP1Q96F81 1524 aa22.59■■□□□ 1.21
FLOT2-201ENST00000394906 KIAA0586Q9BVV6 1533 aa22.59■■□□□ 1.21
FLOT2-201ENST00000394906 UGGT2Q9NYU1 1516 aa22.56■■□□□ 1.2
FLOT2-201ENST00000394906 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
FLOT2-201ENST00000394906 CCDC18Q5T9S5 1454 aa22.55■■□□□ 1.2
FLOT2-201ENST00000394906 HIRIP3Q9BW71 556 aaPredicted RBP22.55■■□□□ 1.2
FLOT2-201ENST00000394906 KIAA0556O60303 1618 aa22.54■■□□□ 1.2
FLOT2-201ENST00000394906 PTPN23Q9H3S7 1636 aa22.53■■□□□ 1.2
FLOT2-201ENST00000394906 CEP170Q5SW79 1584 aa22.53■■□□□ 1.2
FLOT2-201ENST00000394906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.52■■□□□ 1.21e-6■■□□□ 13.7
FLOT2-201ENST00000394906 ZNF644Q9H582 1327 aaPredicted RBP22.51■■□□□ 1.19
FLOT2-201ENST00000394906 SYNJ2O15056 1496 aa22.5■■□□□ 1.19
FLOT2-201ENST00000394906 JPH4Q96JJ6 628 aa22.49■■□□□ 1.19
FLOT2-201ENST00000394906 MAGI1Q96QZ7 1491 aaPredicted RBP22.48■■□□□ 1.19
FLOT2-201ENST00000394906 PLB1Q6P1J6 1458 aa22.48■■□□□ 1.19
FLOT2-201ENST00000394906 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
FLOT2-201ENST00000394906 NAIPQ13075 1403 aa22.47■■□□□ 1.19
FLOT2-201ENST00000394906 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
FLOT2-201ENST00000394906 TRIM52Q96A61 297 aa22.47■■□□□ 1.19
FLOT2-201ENST00000394906 HFM1A2PYH4 1435 aa22.46■■□□□ 1.19
FLOT2-201ENST00000394906 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
FLOT2-201ENST00000394906 ZNF777Q9ULD5 760 aaPredicted RBP22.43■■□□□ 1.18
FLOT2-201ENST00000394906 PRG4Q92954 1404 aaPredicted RBP22.43■■□□□ 1.18
FLOT2-201ENST00000394906 RAPGEF6Q8TEU7 1601 aa22.42■■□□□ 1.18
FLOT2-201ENST00000394906 FOXD1Q16676 465 aa22.4■■□□□ 1.18
FLOT2-201ENST00000394906 GTF3C3Q9Y5Q9 886 aa22.39■■□□□ 1.18
FLOT2-201ENST00000394906 KDM6BO15054 1643 aa22.38■■□□□ 1.17
FLOT2-201ENST00000394906 UACAQ9BZF9 1416 aa22.36■■□□□ 1.17
FLOT2-201ENST00000394906 CDK11AQ9UQ88 783 aaPredicted RBP22.35■■□□□ 1.17
FLOT2-201ENST00000394906 TONSLQ96HA7 1378 aa22.34■■□□□ 1.17
FLOT2-201ENST00000394906 PPP1R15AO75807 674 aaPredicted RBP22.33■■□□□ 1.17
FLOT2-201ENST00000394906 TCOF1Q13428 1488 aaKnown RBP22.33■■□□□ 1.17
FLOT2-201ENST00000394906 NUP160Q12769 1436 aa22.33■■□□□ 1.17
FLOT2-201ENST00000394906 DDX10Q13206 875 aaKnown RBP22.32■■□□□ 1.16
FLOT2-201ENST00000394906 CARMIL2Q6F5E8 1435 aa22.32■■□□□ 1.16
FLOT2-201ENST00000394906 CFDP1Q9UEE9 299 aaPredicted RBP22.3■■□□□ 1.16
FLOT2-201ENST00000394906 MIA2Q96PC5 1412 aa22.29■■□□□ 1.16
FLOT2-201ENST00000394906 KIF14Q15058 1648 aa22.27■■□□□ 1.16
FLOT2-201ENST00000394906 KCNH8Q96L42 1107 aa22.27■■□□□ 1.16
FLOT2-201ENST00000394906 DAPK1P53355 1430 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms