RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 ARAP1Q96P48 1450 aa18.06■□□□□ 0.48
PPP3CB-203ENST00000394828 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
PPP3CB-203ENST00000394828 AQRO60306 1485 aaKnown RBP eCLIP18.05■□□□□ 0.48
PPP3CB-203ENST00000394828 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
PPP3CB-203ENST00000394828 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
PPP3CB-203ENST00000394828 ARHGAP35Q9NRY4 1499 aa18.02■□□□□ 0.48
PPP3CB-203ENST00000394828 EIF4G3O43432 1585 aaKnown RBP17.99■□□□□ 0.47
PPP3CB-203ENST00000394828 CENPBP07199 599 aaPredicted RBP17.99■□□□□ 0.47
PPP3CB-203ENST00000394828 ADAMTS12P58397 1594 aa17.99■□□□□ 0.47
PPP3CB-203ENST00000394828 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
PPP3CB-203ENST00000394828 YTHDC1Q96MU7 727 aaKnown RBP17.97■□□□□ 0.47
PPP3CB-203ENST00000394828 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
PPP3CB-203ENST00000394828 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
PPP3CB-203ENST00000394828 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
PPP3CB-203ENST00000394828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.46
PPP3CB-203ENST00000394828 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
PPP3CB-203ENST00000394828 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
PPP3CB-203ENST00000394828 EFCAB5A4FU69 1503 aa17.86■□□□□ 0.45
PPP3CB-203ENST00000394828 SAMD9Q5K651 1589 aa17.84■□□□□ 0.45
PPP3CB-203ENST00000394828 MAGI1Q96QZ7 1491 aaPredicted RBP17.8■□□□□ 0.44
PPP3CB-203ENST00000394828 FHOD3Q2V2M9 1422 aa17.8■□□□□ 0.44
PPP3CB-203ENST00000394828 PCF11O94913 1555 aaKnown RBP17.79■□□□□ 0.44
PPP3CB-203ENST00000394828 IQGAP2Q13576 1575 aa17.78■□□□□ 0.44
PPP3CB-203ENST00000394828 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
PPP3CB-203ENST00000394828 P3H3Q8IVL6 736 aa17.78■□□□□ 0.44
PPP3CB-203ENST00000394828 APLP2Q06481 763 aa17.75■□□□□ 0.43
PPP3CB-203ENST00000394828 SYNJ2O15056 1496 aa17.75■□□□□ 0.43
PPP3CB-203ENST00000394828 CCER1Q8TC90 406 aaPredicted RBP17.73■□□□□ 0.43
PPP3CB-203ENST00000394828 KANK4Q5T7N3 995 aaPredicted RBP17.72■□□□□ 0.43
PPP3CB-203ENST00000394828 TIAM1Q13009 1591 aa17.72■□□□□ 0.43
PPP3CB-203ENST00000394828 CEP170Q5SW79 1584 aa17.72■□□□□ 0.43
PPP3CB-203ENST00000394828 CFAP43Q8NDM7 1665 aa17.71■□□□□ 0.43
PPP3CB-203ENST00000394828 MAP3K1Q13233 1512 aa17.7■□□□□ 0.42
PPP3CB-203ENST00000394828 UGGT2Q9NYU1 1516 aa17.69■□□□□ 0.42
PPP3CB-203ENST00000394828 FYCO1Q9BQS8 1478 aa17.69■□□□□ 0.42
PPP3CB-203ENST00000394828 KIAA0586Q9BVV6 1533 aa17.69■□□□□ 0.42
PPP3CB-203ENST00000394828 LRRIQ1Q96JM4 1722 aa17.69■□□□□ 0.42
PPP3CB-203ENST00000394828 CASKIN1Q8WXD9 1431 aa17.68■□□□□ 0.42
PPP3CB-203ENST00000394828 FMN1Q68DA7 1419 aa17.66■□□□□ 0.42
PPP3CB-203ENST00000394828 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
PPP3CB-203ENST00000394828 NUP160Q12769 1436 aa17.64■□□□□ 0.41
PPP3CB-203ENST00000394828 KIAA0556O60303 1618 aa17.63■□□□□ 0.41
PPP3CB-203ENST00000394828 DISP1Q96F81 1524 aa17.63■□□□□ 0.41
PPP3CB-203ENST00000394828 LRRC9Q6ZRR7 1453 aa17.62■□□□□ 0.41
PPP3CB-203ENST00000394828 CHD1O14646 1710 aa17.61■□□□□ 0.41
PPP3CB-203ENST00000394828 FBLN2P98095 1184 aa17.6■□□□□ 0.41
PPP3CB-203ENST00000394828 PRKCSHP14314 528 aaPredicted RBP17.59■□□□□ 0.41
PPP3CB-203ENST00000394828 ANP32EQ9BTT0 268 aa17.56■□□□□ 0.4
PPP3CB-203ENST00000394828 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
PPP3CB-203ENST00000394828 RRBP1Q9P2E9 1410 aaKnown RBP17.54■□□□□ 0.4
PPP3CB-203ENST00000394828 HECW1Q76N89 1606 aa17.53■□□□□ 0.4
PPP3CB-203ENST00000394828 MIER1Q8N108 512 aa17.51■□□□□ 0.39
PPP3CB-203ENST00000394828 PHLDB1Q86UU1 1377 aa17.48■□□□□ 0.39
PPP3CB-203ENST00000394828 MAGI3Q5TCQ9 1506 aa17.48■□□□□ 0.39
PPP3CB-203ENST00000394828 CCDC18Q5T9S5 1454 aa17.46■□□□□ 0.39
PPP3CB-203ENST00000394828 RAPGEF6Q8TEU7 1601 aa17.46■□□□□ 0.39
PPP3CB-203ENST00000394828 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
PPP3CB-203ENST00000394828 EPRSP07814 1512 aaKnown RBP17.46■□□□□ 0.39
PPP3CB-203ENST00000394828 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
PPP3CB-203ENST00000394828 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
PPP3CB-203ENST00000394828 CDK13Q14004 1512 aaKnown RBP17.44■□□□□ 0.38
PPP3CB-203ENST00000394828 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
PPP3CB-203ENST00000394828 EHBP1L1Q8N3D4 1523 aa17.43■□□□□ 0.38
PPP3CB-203ENST00000394828 NUP153P49790 1475 aaKnown RBP17.42■□□□□ 0.38
PPP3CB-203ENST00000394828 TSHZ2Q9NRE2 1034 aa17.42■□□□□ 0.38
PPP3CB-203ENST00000394828 CARMIL2Q6F5E8 1435 aa17.42■□□□□ 0.38
PPP3CB-203ENST00000394828 SUPT6HQ7KZ85 1726 aaKnown RBP17.41■□□□□ 0.38
PPP3CB-203ENST00000394828 MTUS2Q5JR59 1369 aa17.4■□□□□ 0.38
PPP3CB-203ENST00000394828 PLB1Q6P1J6 1458 aa17.39■□□□□ 0.37
PPP3CB-203ENST00000394828 ARHGEF11O15085 1522 aa17.38■□□□□ 0.37
PPP3CB-203ENST00000394828 NCOA2Q15596 1464 aa17.37■□□□□ 0.37
PPP3CB-203ENST00000394828 PRG4Q92954 1404 aaPredicted RBP17.37■□□□□ 0.37
PPP3CB-203ENST00000394828 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
PPP3CB-203ENST00000394828 ABCA8O94911 1581 aa17.36■□□□□ 0.37
PPP3CB-203ENST00000394828 ZNF316A6NFI3 1004 aaPredicted RBP17.36■□□□□ 0.37
PPP3CB-203ENST00000394828 SUPT16HQ9Y5B9 1047 aaKnown RBP17.35■□□□□ 0.37
PPP3CB-203ENST00000394828 ARID3CA6NKF2 412 aa17.34■□□□□ 0.37
PPP3CB-203ENST00000394828 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.37
PPP3CB-203ENST00000394828 FGD6Q6ZV73 1430 aa17.32■□□□□ 0.36
PPP3CB-203ENST00000394828 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
PPP3CB-203ENST00000394828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
PPP3CB-203ENST00000394828 ITGAEP38570 1179 aa17.26■□□□□ 0.35
PPP3CB-203ENST00000394828 FAM50AQ14320 339 aaKnown RBP17.26■□□□□ 0.35
PPP3CB-203ENST00000394828 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
PPP3CB-203ENST00000394828 PTPRGP23470 1445 aa17.25■□□□□ 0.35
PPP3CB-203ENST00000394828 ADCY10Q96PN6 1610 aa17.24■□□□□ 0.35
PPP3CB-203ENST00000394828 ATP10BO94823 1461 aa17.22■□□□□ 0.35
PPP3CB-203ENST00000394828 KIF14Q15058 1648 aa17.22■□□□□ 0.35
PPP3CB-203ENST00000394828 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.35
PPP3CB-203ENST00000394828 BCANQ96GW7 911 aa17.21■□□□□ 0.35
PPP3CB-203ENST00000394828 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.35
PPP3CB-203ENST00000394828 PTPRKQ15262 1439 aa17.19■□□□□ 0.34
PPP3CB-203ENST00000394828 UACAQ9BZF9 1416 aa17.17■□□□□ 0.34
PPP3CB-203ENST00000394828 MIA2Q96PC5 1412 aa17.16■□□□□ 0.34
PPP3CB-203ENST00000394828 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
PPP3CB-203ENST00000394828 DHX57Q6P158 1386 aaKnown RBP17.16■□□□□ 0.34
PPP3CB-203ENST00000394828 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
PPP3CB-203ENST00000394828 ABCC2Q92887 1545 aa17.15■□□□□ 0.34
PPP3CB-203ENST00000394828 SETD5Q9C0A6 1442 aa17.14■□□□□ 0.33
PPP3CB-203ENST00000394828 ITSN2Q9NZM3 1697 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms