RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
TUBD1-205ENST00000394239 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
TUBD1-205ENST00000394239 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
TUBD1-205ENST00000394239 KIAA0586Q9BVV6 1533 aa19.85■□□□□ 0.77
TUBD1-205ENST00000394239 ERCC6L2Q5T890 1561 aa19.84■□□□□ 0.77
TUBD1-205ENST00000394239 SHROOM2Q13796 1616 aa19.83■□□□□ 0.77
TUBD1-205ENST00000394239 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.76
TUBD1-205ENST00000394239 JPH4Q96JJ6 628 aa19.82■□□□□ 0.76
TUBD1-205ENST00000394239 KIF21BO75037 1637 aa19.8■□□□□ 0.76
TUBD1-205ENST00000394239 IQGAP2Q13576 1575 aa19.77■□□□□ 0.76
TUBD1-205ENST00000394239 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
TUBD1-205ENST00000394239 ARAP1Q96P48 1450 aa19.76■□□□□ 0.75
TUBD1-205ENST00000394239 CTTNBP2Q8WZ74 1663 aa19.75■□□□□ 0.75
TUBD1-205ENST00000394239 CYB5RLQ6IPT4 315 aa19.7■□□□□ 0.74
TUBD1-205ENST00000394239 GOLGA3Q08378 1498 aa19.69■□□□□ 0.74
TUBD1-205ENST00000394239 UGGT2Q9NYU1 1516 aa19.68■□□□□ 0.74
TUBD1-205ENST00000394239 DISP1Q96F81 1524 aa19.67■□□□□ 0.74
TUBD1-205ENST00000394239 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
TUBD1-205ENST00000394239 RANGAP1P46060 587 aaPredicted RBP19.62■□□□□ 0.73
TUBD1-205ENST00000394239 KIAA0556O60303 1618 aa19.6■□□□□ 0.73
TUBD1-205ENST00000394239 CARMIL2Q6F5E8 1435 aa19.59■□□□□ 0.73
TUBD1-205ENST00000394239 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
TUBD1-205ENST00000394239 P3H3Q8IVL6 736 aa19.56■□□□□ 0.72
TUBD1-205ENST00000394239 TNIKQ9UKE5 1360 aa19.55■□□□□ 0.72
TUBD1-205ENST00000394239 SAMD9Q5K651 1589 aa19.54■□□□□ 0.72
TUBD1-205ENST00000394239 PTPRGP23470 1445 aa19.53■□□□□ 0.72
TUBD1-205ENST00000394239 PCGF6Q9BYE7 350 aa19.52■□□□□ 0.72
TUBD1-205ENST00000394239 FHOD3Q2V2M9 1422 aa19.47■□□□□ 0.71
TUBD1-205ENST00000394239 ADCY10Q96PN6 1610 aa19.46■□□□□ 0.71
TUBD1-205ENST00000394239 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
TUBD1-205ENST00000394239 PLB1Q6P1J6 1458 aa19.44■□□□□ 0.7
TUBD1-205ENST00000394239 EFCAB5A4FU69 1503 aa19.44■□□□□ 0.7
TUBD1-205ENST00000394239 UACAQ9BZF9 1416 aa19.41■□□□□ 0.7
TUBD1-205ENST00000394239 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
TUBD1-205ENST00000394239 ABCA8O94911 1581 aa19.38■□□□□ 0.69
TUBD1-205ENST00000394239 ABCC2Q92887 1545 aa19.37■□□□□ 0.69
TUBD1-205ENST00000394239 CLIP1P30622 1438 aa19.37■□□□□ 0.69
TUBD1-205ENST00000394239 UHRF1BP1LA0JNW5 1464 aa19.36■□□□□ 0.69
TUBD1-205ENST00000394239 CEP162Q5TB80 1403 aa19.35■□□□□ 0.69
TUBD1-205ENST00000394239 ARID3CA6NKF2 412 aa19.31■□□□□ 0.68
TUBD1-205ENST00000394239 RAPGEF6Q8TEU7 1601 aa19.3■□□□□ 0.68
TUBD1-205ENST00000394239 HRCP23327 699 aa19.3■□□□□ 0.68
TUBD1-205ENST00000394239 KDM5BQ9UGL1 1544 aa19.3■□□□□ 0.68
TUBD1-205ENST00000394239 NPM1P06748 294 aaKnown RBP eCLIP19.27■□□□□ 0.68
TUBD1-205ENST00000394239 ZCCHC11Q5TAX3 1644 aaKnown RBP19.27■□□□□ 0.68
TUBD1-205ENST00000394239 NUP153P49790 1475 aaKnown RBP19.27■□□□□ 0.68
TUBD1-205ENST00000394239 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
TUBD1-205ENST00000394239 ATP10BO94823 1461 aa19.25■□□□□ 0.67
TUBD1-205ENST00000394239 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
TUBD1-205ENST00000394239 ASXL2Q76L83 1435 aa19.21■□□□□ 0.67
TUBD1-205ENST00000394239 PCF11O94913 1555 aaKnown RBP19.2■□□□□ 0.66
TUBD1-205ENST00000394239 TRHP20396 242 aaPredicted RBP19.2■□□□□ 0.66
TUBD1-205ENST00000394239 ATP1B4Q9UN42 357 aaPredicted RBP19.19■□□□□ 0.66
TUBD1-205ENST00000394239 CDK13Q14004 1512 aaKnown RBP19.18■□□□□ 0.66
TUBD1-205ENST00000394239 LRRIQ1Q96JM4 1722 aa19.17■□□□□ 0.66
TUBD1-205ENST00000394239 CASKIN1Q8WXD9 1431 aa19.16■□□□□ 0.66
TUBD1-205ENST00000394239 HECW1Q76N89 1606 aa19.15■□□□□ 0.66
TUBD1-205ENST00000394239 ABCC10Q5T3U5 1492 aa19.15■□□□□ 0.66
TUBD1-205ENST00000394239 EPRSP07814 1512 aaKnown RBP19.14■□□□□ 0.66
TUBD1-205ENST00000394239 DIP2BQ9P265 1576 aa19.14■□□□□ 0.65
TUBD1-205ENST00000394239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.65
TUBD1-205ENST00000394239 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
TUBD1-205ENST00000394239 KIF13AQ9H1H9 1805 aa19.13■□□□□ 0.65
TUBD1-205ENST00000394239 WDR7Q9Y4E6 1490 aa19.13■□□□□ 0.65
TUBD1-205ENST00000394239 FYCO1Q9BQS8 1478 aa19.11■□□□□ 0.65
TUBD1-205ENST00000394239 FAM69CQ0P6D2 419 aa19.11■□□□□ 0.65
TUBD1-205ENST00000394239 KCNH8Q96L42 1107 aa19.08■□□□□ 0.65
TUBD1-205ENST00000394239 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.64
TUBD1-205ENST00000394239 MAGI3Q5TCQ9 1506 aa19.04■□□□□ 0.64
TUBD1-205ENST00000394239 PLEKHD1A6NEE1 506 aa19.03■□□□□ 0.64
TUBD1-205ENST00000394239 GLI2P10070 1586 aa19.03■□□□□ 0.64
TUBD1-205ENST00000394239 CCDC18Q5T9S5 1454 aa19.02■□□□□ 0.63
TUBD1-205ENST00000394239 PPARGC1BQ86YN6 1023 aaKnown RBP19.01■□□□□ 0.63
TUBD1-205ENST00000394239 MAP3K4Q9Y6R4 1608 aa18.99■□□□□ 0.63
TUBD1-205ENST00000394239 TSPOAP1O95153 1857 aa18.98■□□□□ 0.63
TUBD1-205ENST00000394239 TROQ12816 1431 aaPredicted RBP18.97■□□□□ 0.63
TUBD1-205ENST00000394239 PPRC1Q5VV67 1664 aaKnown RBP18.96■□□□□ 0.63
TUBD1-205ENST00000394239 KIF14Q15058 1648 aa18.96■□□□□ 0.63
TUBD1-205ENST00000394239 CDK11AQ9UQ88 783 aaPredicted RBP18.95■□□□□ 0.62
TUBD1-205ENST00000394239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.95■□□□□ 0.62
TUBD1-205ENST00000394239 ABCA9Q8IUA7 1624 aa18.94■□□□□ 0.62
TUBD1-205ENST00000394239 TTC37Q6PGP7 1564 aa18.94■□□□□ 0.62
TUBD1-205ENST00000394239 CD109Q6YHK3 1445 aa18.93■□□□□ 0.62
TUBD1-205ENST00000394239 CFAP43Q8NDM7 1665 aa18.92■□□□□ 0.62
TUBD1-205ENST00000394239 TIAM1Q13009 1591 aa18.92■□□□□ 0.62
TUBD1-205ENST00000394239 KANK4Q5T7N3 995 aaPredicted RBP18.89■□□□□ 0.61
TUBD1-205ENST00000394239 MTUS2Q5JR59 1369 aa18.87■□□□□ 0.61
TUBD1-205ENST00000394239 LRRC9Q6ZRR7 1453 aa18.84■□□□□ 0.61
TUBD1-205ENST00000394239 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
TUBD1-205ENST00000394239 ZEB1P37275 1124 aaPredicted RBP18.84■□□□□ 0.61
TUBD1-205ENST00000394239 EHBP1L1Q8N3D4 1523 aa18.84■□□□□ 0.61
TUBD1-205ENST00000394239 COL17A1Q9UMD9 1497 aaPredicted RBP18.82■□□□□ 0.6
TUBD1-205ENST00000394239 TEX14Q8IWB6 1497 aa18.81■□□□□ 0.6
TUBD1-205ENST00000394239 PLCH2O75038 1416 aa18.8■□□□□ 0.6
TUBD1-205ENST00000394239 MYO5CQ9NQX4 1742 aa18.79■□□□□ 0.6
TUBD1-205ENST00000394239 FANCAO15360 1455 aa18.77■□□□□ 0.6
TUBD1-205ENST00000394239 NCOA2Q15596 1464 aa18.77■□□□□ 0.6
TUBD1-205ENST00000394239 APLP2Q06481 763 aa18.77■□□□□ 0.6
TUBD1-205ENST00000394239 CDC42BPAQ5VT25 1732 aa18.77■□□□□ 0.6
TUBD1-205ENST00000394239 CDC42BPBQ9Y5S2 1711 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms