RNA–Protein interactions for RNA: ENST00000394121.8

THRA-202, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 2 BASIC

Gene THRA, Length 2,260 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-202ENST00000394121 VPS8Q8N3P4 1428 aa34.99■■■■□ 3.19
THRA-202ENST00000394121 GRIN2BQ13224 1484 aa34.96■■■■□ 3.19
THRA-202ENST00000394121 PBRM1Q86U86 1689 aa34.95■■■■□ 3.19
THRA-202ENST00000394121 CUL7Q14999 1698 aa34.93■■■■□ 3.18
THRA-202ENST00000394121 ACIN1Q9UKV3 1341 aaKnown RBP34.91■■■■□ 3.18
THRA-202ENST00000394121 PELP1Q8IZL8 1130 aaKnown RBP34.87■■■■□ 3.17
THRA-202ENST00000394121 SNAPC4Q5SXM2 1469 aa34.86■■■■□ 3.17
THRA-202ENST00000394121 FHAD1B1AJZ9 1412 aa34.81■■■■□ 3.16
THRA-202ENST00000394121 ADAMTS12P58397 1594 aa34.79■■■■□ 3.16
THRA-202ENST00000394121 ZNF316A6NFI3 1004 aaPredicted RBP34.79■■■■□ 3.16
THRA-202ENST00000394121 APLP2Q06481 763 aa34.78■■■■□ 3.16
THRA-202ENST00000394121 NEUROD1Q13562 356 aa34.78■■■■□ 3.16
THRA-202ENST00000394121 HNRNPUL2Q1KMD3 747 aaKnown RBP34.75■■■■□ 3.15
THRA-202ENST00000394121 CENPBP07199 599 aaPredicted RBP34.72■■■■□ 3.15
THRA-202ENST00000394121 FBLN2P98095 1184 aa34.71■■■■□ 3.15
THRA-202ENST00000394121 MAGI1Q96QZ7 1491 aaPredicted RBP34.65■■■■□ 3.14
THRA-202ENST00000394121 CHMP7Q8WUX9 453 aaPredicted RBP34.64■■■■□ 3.14
THRA-202ENST00000394121 ARHGAP35Q9NRY4 1499 aa34.58■■■■□ 3.13
THRA-202ENST00000394121 P3H3Q8IVL6 736 aa34.57■■■■□ 3.13
THRA-202ENST00000394121 SYNJ2O15056 1496 aa34.57■■■■□ 3.12
THRA-202ENST00000394121 GRIN2AQ12879 1464 aa34.57■■■■□ 3.12
THRA-202ENST00000394121 ARAP1Q96P48 1450 aa34.55■■■■□ 3.12
THRA-202ENST00000394121 CTTNBP2Q8WZ74 1663 aa34.52■■■■□ 3.12
THRA-202ENST00000394121 GTF3C3Q9Y5Q9 886 aa34.44■■■■□ 3.1
THRA-202ENST00000394121 CEP170Q5SW79 1584 aa34.39■■■■□ 3.1
THRA-202ENST00000394121 FHOD3Q2V2M9 1422 aa34.37■■■■□ 3.09
THRA-202ENST00000394121 IQGAP2Q13576 1575 aa34.35■■■■□ 3.09
THRA-202ENST00000394121 CLSPNQ9HAW4 1339 aa34.34■■■■□ 3.09
THRA-202ENST00000394121 KIAA0586Q9BVV6 1533 aa34.33■■■■□ 3.09
THRA-202ENST00000394121 NUP160Q12769 1436 aa34.31■■■■□ 3.08
THRA-202ENST00000394121 KANK4Q5T7N3 995 aaPredicted RBP34.27■■■■□ 3.08
THRA-202ENST00000394121 CHD1O14646 1710 aa34.26■■■■□ 3.08
THRA-202ENST00000394121 MIER1Q8N108 512 aa34.24■■■■□ 3.07
THRA-202ENST00000394121 EFCAB5A4FU69 1503 aa34.23■■■■□ 3.07
THRA-202ENST00000394121 RRBP1Q9P2E9 1410 aaKnown RBP34.23■■■■□ 3.07
THRA-202ENST00000394121 DHX57Q6P158 1386 aaKnown RBP34.23■■■■□ 3.07
THRA-202ENST00000394121 SAMD9Q5K651 1589 aa34.21■■■■□ 3.07
THRA-202ENST00000394121 JPH4Q96JJ6 628 aa34.16■■■■□ 3.06
THRA-202ENST00000394121 UGGT2Q9NYU1 1516 aa34.15■■■■□ 3.06
THRA-202ENST00000394121 ATP1B4Q9UN42 357 aaPredicted RBP34.14■■■■□ 3.06
THRA-202ENST00000394121 DISP1Q96F81 1524 aa34.12■■■■□ 3.05
THRA-202ENST00000394121 YTHDC1Q96MU7 727 aaKnown RBP34.11■■■■□ 3.05
THRA-202ENST00000394121 PCF11O94913 1555 aaKnown RBP34.04■■■■□ 3.04
THRA-202ENST00000394121 CCNB3Q8WWL7 1395 aa34.03■■■■□ 3.04
THRA-202ENST00000394121 KIAA0556O60303 1618 aa34.01■■■■□ 3.04
THRA-202ENST00000394121 FMN1Q68DA7 1419 aa34.01■■■■□ 3.03
THRA-202ENST00000394121 CASKIN1Q8WXD9 1431 aa33.94■■■■□ 3.02
THRA-202ENST00000394121 MAP3K1Q13233 1512 aa33.94■■■■□ 3.02
THRA-202ENST00000394121 PRG4Q92954 1404 aaPredicted RBP33.94■■■■□ 3.02
THRA-202ENST00000394121 ARID3CA6NKF2 412 aa33.91■■■■□ 3.02
THRA-202ENST00000394121 FYCO1Q9BQS8 1478 aa33.89■■■■□ 3.02
THRA-202ENST00000394121 TIAM1Q13009 1591 aa33.89■■■■□ 3.02
THRA-202ENST00000394121 CARMIL2Q6F5E8 1435 aa33.88■■■■□ 3.01
THRA-202ENST00000394121 CLASP1Q7Z460 1538 aa33.86■■■■□ 3.01
THRA-202ENST00000394121 ERCC6L2Q5T890 1561 aa33.83■■■■□ 3.01
THRA-202ENST00000394121 SHROOM2Q13796 1616 aa33.78■■■■□ 3
THRA-202ENST00000394121 OSCARQ8IYS5 282 aa33.77■■■■□ 3
THRA-202ENST00000394121 PLB1Q6P1J6 1458 aa33.77■■■■□ 3
THRA-202ENST00000394121 LRRIQ1Q96JM4 1722 aa33.74■■■□□ 2.99
THRA-202ENST00000394121 LRRC9Q6ZRR7 1453 aa33.74■■■□□ 2.99
THRA-202ENST00000394121 ITGAEP38570 1179 aa33.72■■■□□ 2.99
THRA-202ENST00000394121 RAB3GAP2Q9H2M9 1393 aa33.71■■■□□ 2.99
THRA-202ENST00000394121 PTPRGP23470 1445 aa33.68■■■□□ 2.98
THRA-202ENST00000394121 CDK13Q14004 1512 aaKnown RBP33.67■■■□□ 2.98
THRA-202ENST00000394121 CFAP43Q8NDM7 1665 aa33.67■■■□□ 2.98
THRA-202ENST00000394121 NUP153P49790 1475 aaKnown RBP33.65■■■□□ 2.98
THRA-202ENST00000394121 EPRSP07814 1512 aaKnown RBP33.65■■■□□ 2.98
THRA-202ENST00000394121 HECW1Q76N89 1606 aa33.64■■■□□ 2.98
THRA-202ENST00000394121 MAPKBP1O60336 1514 aa33.64■■■□□ 2.98
THRA-202ENST00000394121 RAPGEF6Q8TEU7 1601 aa33.63■■■□□ 2.97
THRA-202ENST00000394121 SETD5Q9C0A6 1442 aa33.62■■■□□ 2.97
THRA-202ENST00000394121 PHLDB1Q86UU1 1377 aa33.6■■■□□ 2.97
THRA-202ENST00000394121 MAGI3Q5TCQ9 1506 aa33.57■■■□□ 2.96
THRA-202ENST00000394121 MTUS2Q5JR59 1369 aa33.57■■■□□ 2.96
THRA-202ENST00000394121 CCDC18Q5T9S5 1454 aa33.54■■■□□ 2.96
THRA-202ENST00000394121 ABCA8O94911 1581 aa33.53■■■□□ 2.96
THRA-202ENST00000394121 UACAQ9BZF9 1416 aa33.45■■■□□ 2.94
THRA-202ENST00000394121 FAM50AQ14320 339 aaKnown RBP33.44■■■□□ 2.94
THRA-202ENST00000394121 ATP10BO94823 1461 aa33.41■■■□□ 2.94
THRA-202ENST00000394121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.38■■■□□ 2.93
THRA-202ENST00000394121 EHBP1L1Q8N3D4 1523 aa33.37■■■□□ 2.93
THRA-202ENST00000394121 NCOA2Q15596 1464 aa33.36■■■□□ 2.93
THRA-202ENST00000394121 TIMELESSQ9UNS1 1208 aa33.31■■■□□ 2.92
THRA-202ENST00000394121 CDK11AQ9UQ88 783 aaPredicted RBP33.31■■■□□ 2.92
THRA-202ENST00000394121 ABCC2Q92887 1545 aa33.3■■■□□ 2.92
THRA-202ENST00000394121 SIN3AQ96ST3 1273 aa33.27■■■□□ 2.92
THRA-202ENST00000394121 SUPT6HQ7KZ85 1726 aaKnown RBP33.26■■■□□ 2.91
THRA-202ENST00000394121 PLEKHD1A6NEE1 506 aa33.25■■■□□ 2.91
THRA-202ENST00000394121 TROQ12816 1431 aaPredicted RBP33.24■■■□□ 2.91
THRA-202ENST00000394121 ARHGEF11O15085 1522 aa33.22■■■□□ 2.91
THRA-202ENST00000394121 SUPT16HQ9Y5B9 1047 aaKnown RBP33.2■■■□□ 2.91
THRA-202ENST00000394121 MYOM3Q5VTT5 1437 aa33.18■■■□□ 2.9
THRA-202ENST00000394121 FGD6Q6ZV73 1430 aa33.18■■■□□ 2.9
THRA-202ENST00000394121 UHRF1BP1LA0JNW5 1464 aa33.17■■■□□ 2.9
THRA-202ENST00000394121 KIF14Q15058 1648 aa33.16■■■□□ 2.9
THRA-202ENST00000394121 ADCY10Q96PN6 1610 aa33.16■■■□□ 2.9
THRA-202ENST00000394121 MYT1Q01538 1121 aa33.14■■■□□ 2.9
THRA-202ENST00000394121 KDM5BQ9UGL1 1544 aa33.1■■■□□ 2.89
THRA-202ENST00000394121 PPP1R15AO75807 674 aaPredicted RBP33.09■■■□□ 2.89
THRA-202ENST00000394121 ZCCHC11Q5TAX3 1644 aaKnown RBP33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms