RNA–Protein interactions for RNA: ENST00000394120.6

DYSF-202, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-202ENST00000394120 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
DYSF-202ENST00000394120 CEP164Q9UPV0 1460 aa17.29■□□□□ 0.36
DYSF-202ENST00000394120 PPM1GO15355 546 aaPredicted RBP17.29■□□□□ 0.36
DYSF-202ENST00000394120 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
DYSF-202ENST00000394120 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.36
DYSF-202ENST00000394120 SIN3AQ96ST3 1273 aa17.27■□□□□ 0.35
DYSF-202ENST00000394120 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
DYSF-202ENST00000394120 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
DYSF-202ENST00000394120 RRP7BPQ9NSQ0 103 aa17.24■□□□□ 0.35
DYSF-202ENST00000394120 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
DYSF-202ENST00000394120 KDM2AQ9Y2K7 1162 aa17.23■□□□□ 0.35
DYSF-202ENST00000394120 BECN1Q14457 450 aa17.21■□□□□ 0.35
DYSF-202ENST00000394120 B4GALNT3Q6L9W6 998 aa17.21■□□□□ 0.35
DYSF-202ENST00000394120 DEKP35659 375 aaKnown RBP17.2■□□□□ 0.34
DYSF-202ENST00000394120 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
DYSF-202ENST00000394120 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
DYSF-202ENST00000394120 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
DYSF-202ENST00000394120 SENP3-EIF4A1A0A087X0R7 540 aa17.16■□□□□ 0.34
DYSF-202ENST00000394120 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
DYSF-202ENST00000394120 ERICH6BQ5W0A0 696 aa17.15■□□□□ 0.34
DYSF-202ENST00000394120 SLC24A1O60721 1099 aa17.15■□□□□ 0.34
DYSF-202ENST00000394120 TSPY4P0CV99 314 aa17.13■□□□□ 0.33
DYSF-202ENST00000394120 TSPY10P0CW01 314 aa17.13■□□□□ 0.33
DYSF-202ENST00000394120 SOGA1O94964 1423 aa17.12■□□□□ 0.33
DYSF-202ENST00000394120 TRIM44Q96DX7 344 aaPredicted RBP17.11■□□□□ 0.33
DYSF-202ENST00000394120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
DYSF-202ENST00000394120 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.32
DYSF-202ENST00000394120 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
DYSF-202ENST00000394120 CHGAP10645 457 aaKnown RBP17.06■□□□□ 0.32
DYSF-202ENST00000394120 CARD11Q9BXL7 1154 aa17.02■□□□□ 0.31
DYSF-202ENST00000394120 SETD5Q9C0A6 1442 aa17■□□□□ 0.31
DYSF-202ENST00000394120 GOLGA6L22H0YM25 854 aa17■□□□□ 0.31
DYSF-202ENST00000394120 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
DYSF-202ENST00000394120 RGS3P49796 1198 aa17■□□□□ 0.31
DYSF-202ENST00000394120 NAP1L5Q96NT1 182 aaPredicted RBP16.98■□□□□ 0.31
DYSF-202ENST00000394120 MYH16Q9H6N6 1097 aa16.96■□□□□ 0.31
DYSF-202ENST00000394120 KANK4Q5T7N3 995 aaPredicted RBP16.96■□□□□ 0.31
DYSF-202ENST00000394120 KNSTRNQ9Y448 316 aa16.95■□□□□ 0.3
DYSF-202ENST00000394120 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
DYSF-202ENST00000394120 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
DYSF-202ENST00000394120 RGL3Q3MIN7 710 aa16.93■□□□□ 0.3
DYSF-202ENST00000394120 RAB3GAP2Q9H2M9 1393 aa16.92■□□□□ 0.3
DYSF-202ENST00000394120 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
DYSF-202ENST00000394120 CCDC88BA6NC98 1476 aa16.91■□□□□ 0.3
DYSF-202ENST00000394120 CDCA8Q53HL2 280 aa16.91■□□□□ 0.3
DYSF-202ENST00000394120 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
DYSF-202ENST00000394120 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
DYSF-202ENST00000394120 NCLP19338 710 aaKnown RBP16.89■□□□□ 0.29
DYSF-202ENST00000394120 NACADO15069 1562 aa16.88■□□□□ 0.29
DYSF-202ENST00000394120 IPO9Q96P70 1041 aaKnown RBP16.88■□□□□ 0.29
DYSF-202ENST00000394120 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
DYSF-202ENST00000394120 TCERG1O14776 1098 aaKnown RBP16.86■□□□□ 0.29
DYSF-202ENST00000394120 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
DYSF-202ENST00000394120 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
DYSF-202ENST00000394120 FTSJ3Q8IY81 847 aaKnown RBP16.85■□□□□ 0.29
DYSF-202ENST00000394120 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
DYSF-202ENST00000394120 CFAP53Q96M91 514 aa16.84■□□□□ 0.29
DYSF-202ENST00000394120 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
DYSF-202ENST00000394120 CC2D1BQ5T0F9 858 aaKnown RBP16.84■□□□□ 0.29
DYSF-202ENST00000394120 PTMAP06454 111 aaKnown RBP16.83■□□□□ 0.28
DYSF-202ENST00000394120 TNNT2P45379 298 aaPredicted RBP16.83■□□□□ 0.28
DYSF-202ENST00000394120 FRAT1Q92837 279 aaPredicted RBP16.83■□□□□ 0.28
DYSF-202ENST00000394120 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
DYSF-202ENST00000394120 PLEKHD1A6NEE1 506 aa16.82■□□□□ 0.28
DYSF-202ENST00000394120 NEUROD2Q15784 382 aa16.81■□□□□ 0.28
DYSF-202ENST00000394120 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
DYSF-202ENST00000394120 RCAN3Q9UKA8 241 aa16.79■□□□□ 0.28
DYSF-202ENST00000394120 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
DYSF-202ENST00000394120 ARHGAP35Q9NRY4 1499 aa16.78■□□□□ 0.28
DYSF-202ENST00000394120 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
DYSF-202ENST00000394120 FANCIQ9NVI1 1328 aa16.78■□□□□ 0.28
DYSF-202ENST00000394120 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.28
DYSF-202ENST00000394120 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.27
DYSF-202ENST00000394120 HSP90AB1P08238 724 aaKnown RBP16.75■□□□□ 0.27
DYSF-202ENST00000394120 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.74■□□□□ 0.27
DYSF-202ENST00000394120 DCAF11Q8TEB1 546 aa16.74■□□□□ 0.27
DYSF-202ENST00000394120 CASC1Q6TDU7 716 aa16.74■□□□□ 0.27
DYSF-202ENST00000394120 MS4A1P11836 297 aa16.73■□□□□ 0.27
DYSF-202ENST00000394120 HSCBQ8IWL3 235 aa16.73■□□□□ 0.27
DYSF-202ENST00000394120 TMF1P82094 1093 aa16.73■□□□□ 0.27
DYSF-202ENST00000394120 USP35Q9P2H5 1018 aa16.7■□□□□ 0.26
DYSF-202ENST00000394120 KTN1Q86UP2 1357 aaKnown RBP16.7■□□□□ 0.26
DYSF-202ENST00000394120 RALBP1Q15311 655 aa16.7■□□□□ 0.26
DYSF-202ENST00000394120 CUX2O14529 1486 aa16.7■□□□□ 0.26
DYSF-202ENST00000394120 ESF1Q9H501 851 aaKnown RBP16.7■□□□□ 0.26
DYSF-202ENST00000394120 MAPK8IP3Q9UPT6 1336 aa16.69■□□□□ 0.26
DYSF-202ENST00000394120 FOXD1Q16676 465 aa16.69■□□□□ 0.26
DYSF-202ENST00000394120 MPHOSPH9Q99550 1183 aa16.68■□□□□ 0.26
DYSF-202ENST00000394120 SPRYD3Q8NCJ5 442 aa16.68■□□□□ 0.26
DYSF-202ENST00000394120 PNNQ9H307 717 aaKnown RBP16.67■□□□□ 0.26
DYSF-202ENST00000394120 CHMP4BQ9H444 224 aaKnown RBP16.67■□□□□ 0.26
DYSF-202ENST00000394120 MSNP26038 577 aaKnown RBP16.66■□□□□ 0.26
DYSF-202ENST00000394120 SLKQ9H2G2 1235 aaPredicted RBP16.66■□□□□ 0.26
DYSF-202ENST00000394120 L3MBTL2Q969R5 705 aa16.65■□□□□ 0.26
DYSF-202ENST00000394120 FMN1Q68DA7 1419 aa16.64■□□□□ 0.25
DYSF-202ENST00000394120 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
DYSF-202ENST00000394120 PKD2Q13563 968 aa16.63■□□□□ 0.25
DYSF-202ENST00000394120 PDE3BQ13370 1112 aa16.62■□□□□ 0.25
DYSF-202ENST00000394120 TPRNQ4KMQ1 711 aa16.61■□□□□ 0.25
DYSF-202ENST00000394120 ZBED9Q6R2W3 1325 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms