RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CEP162Q5TB80 1403 aa39.04■■■■□ 3.84
LRFN4-202ENST00000393952 CEP170Q5SW79 1584 aa39.02■■■■□ 3.84
LRFN4-202ENST00000393952 NUP160Q12769 1436 aa38.99■■■■□ 3.83
LRFN4-202ENST00000393952 RANGAP1P46060 587 aaPredicted RBP38.96■■■■□ 3.83
LRFN4-202ENST00000393952 KIAA0586Q9BVV6 1533 aa38.91■■■■□ 3.82
LRFN4-202ENST00000393952 IQGAP2Q13576 1575 aa38.91■■■■□ 3.82
LRFN4-202ENST00000393952 CLIP1P30622 1438 aa38.9■■■■□ 3.82
LRFN4-202ENST00000393952 ARHGAP35Q9NRY4 1499 aa38.75■■■■□ 3.79
LRFN4-202ENST00000393952 UGGT2Q9NYU1 1516 aa38.71■■■■□ 3.79
LRFN4-202ENST00000393952 EFCAB5A4FU69 1503 aa38.69■■■■□ 3.78
LRFN4-202ENST00000393952 CLASP1Q7Z460 1538 aa38.69■■■■□ 3.78
LRFN4-202ENST00000393952 SAMD9Q5K651 1589 aa38.67■■■■□ 3.78
LRFN4-202ENST00000393952 ARAP1Q96P48 1450 aa38.64■■■■□ 3.78
LRFN4-202ENST00000393952 JPH4Q96JJ6 628 aa38.62■■■■□ 3.77
LRFN4-202ENST00000393952 P3H3Q8IVL6 736 aa38.6■■■■□ 3.77
LRFN4-202ENST00000393952 OSCARQ8IYS5 282 aa38.59■■■■□ 3.77
LRFN4-202ENST00000393952 SHROOM2Q13796 1616 aa38.56■■■■□ 3.76
LRFN4-202ENST00000393952 DISP1Q96F81 1524 aa38.56■■■■□ 3.76
LRFN4-202ENST00000393952 FHOD3Q2V2M9 1422 aa38.55■■■■□ 3.76
LRFN4-202ENST00000393952 KIAA0556O60303 1618 aa38.53■■■■□ 3.76
LRFN4-202ENST00000393952 VPS8Q8N3P4 1428 aa38.46■■■■□ 3.75
LRFN4-202ENST00000393952 PRG4Q92954 1404 aaPredicted RBP38.46■■■■□ 3.75
LRFN4-202ENST00000393952 CARMIL2Q6F5E8 1435 aa38.44■■■■□ 3.74
LRFN4-202ENST00000393952 ERCC6L2Q5T890 1561 aa38.35■■■■□ 3.73
LRFN4-202ENST00000393952 FMN1Q68DA7 1419 aa38.31■■■■□ 3.72
LRFN4-202ENST00000393952 TTBK1Q5TCY1 1321 aaPredicted RBP38.26■■■■□ 3.71
LRFN4-202ENST00000393952 PCF11O94913 1555 aaKnown RBP38.24■■■■□ 3.71
LRFN4-202ENST00000393952 CASKIN1Q8WXD9 1431 aa38.17■■■■□ 3.7
LRFN4-202ENST00000393952 FYCO1Q9BQS8 1478 aa38.14■■■■□ 3.7
LRFN4-202ENST00000393952 PTPRGP23470 1445 aa38.14■■■■□ 3.7
LRFN4-202ENST00000393952 ATP1B4Q9UN42 357 aaPredicted RBP38.08■■■■□ 3.69
LRFN4-202ENST00000393952 RAPGEF6Q8TEU7 1601 aa38.07■■■■□ 3.68
LRFN4-202ENST00000393952 PLB1Q6P1J6 1458 aa38.06■■■■□ 3.68
LRFN4-202ENST00000393952 HECW1Q76N89 1606 aa38.03■■■■□ 3.68
LRFN4-202ENST00000393952 ABCA8O94911 1581 aa38.02■■■■□ 3.68
LRFN4-202ENST00000393952 ARHGEF11O15085 1522 aa38■■■■□ 3.67
LRFN4-202ENST00000393952 APLP2Q06481 763 aa38■■■■□ 3.67
LRFN4-202ENST00000393952 LRRIQ1Q96JM4 1722 aa37.99■■■■□ 3.67
LRFN4-202ENST00000393952 NUP153P49790 1475 aaKnown RBP37.94■■■■□ 3.66
LRFN4-202ENST00000393952 TIAM1Q13009 1591 aa37.93■■■■□ 3.66
LRFN4-202ENST00000393952 PPARGC1BQ86YN6 1023 aaKnown RBP37.93■■■■□ 3.66
LRFN4-202ENST00000393952 CFAP43Q8NDM7 1665 aa37.92■■■■□ 3.66
LRFN4-202ENST00000393952 UACAQ9BZF9 1416 aa37.92■■■■□ 3.66
LRFN4-202ENST00000393952 MAP3K1Q13233 1512 aa37.9■■■■□ 3.66
LRFN4-202ENST00000393952 RIMBP3CA6NJZ7 1639 aa37.89■■■■□ 3.66
LRFN4-202ENST00000393952 RIMBP3BA6NNM3 1639 aa37.89■■■■□ 3.66
LRFN4-202ENST00000393952 RIMBP3Q9UFD9 1639 aa37.89■■■■□ 3.66
LRFN4-202ENST00000393952 EPRSP07814 1512 aaKnown RBP37.88■■■■□ 3.65
LRFN4-202ENST00000393952 ARID3CA6NKF2 412 aa37.87■■■■□ 3.65
LRFN4-202ENST00000393952 CCDC18Q5T9S5 1454 aa37.86■■■■□ 3.65
LRFN4-202ENST00000393952 CDK13Q14004 1512 aaKnown RBP37.85■■■■□ 3.65
LRFN4-202ENST00000393952 ABCC2Q92887 1545 aa37.84■■■■□ 3.65
LRFN4-202ENST00000393952 KANK4Q5T7N3 995 aaPredicted RBP37.8■■■■□ 3.64
LRFN4-202ENST00000393952 UHRF1BP1LA0JNW5 1464 aa37.78■■■■□ 3.64
LRFN4-202ENST00000393952 ADCY10Q96PN6 1610 aa37.74■■■■□ 3.63
LRFN4-202ENST00000393952 LRRC9Q6ZRR7 1453 aa37.74■■■■□ 3.63
LRFN4-202ENST00000393952 ATP10BO94823 1461 aa37.72■■■■□ 3.63
LRFN4-202ENST00000393952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.68■■■■□ 3.62
LRFN4-202ENST00000393952 HNRNPUL2Q1KMD3 747 aaKnown RBP37.68■■■■□ 3.62
LRFN4-202ENST00000393952 MAGI3Q5TCQ9 1506 aa37.66■■■■□ 3.62
LRFN4-202ENST00000393952 MTUS2Q5JR59 1369 aa37.63■■■■□ 3.61
LRFN4-202ENST00000393952 KDM5BQ9UGL1 1544 aa37.62■■■■□ 3.61
LRFN4-202ENST00000393952 CYB5RLQ6IPT4 315 aa37.61■■■■□ 3.61
LRFN4-202ENST00000393952 ZCCHC11Q5TAX3 1644 aaKnown RBP37.61■■■■□ 3.61
LRFN4-202ENST00000393952 EHBP1L1Q8N3D4 1523 aa37.6■■■■□ 3.61
LRFN4-202ENST00000393952 CDK11AQ9UQ88 783 aaPredicted RBP37.57■■■■□ 3.6
LRFN4-202ENST00000393952 TROQ12816 1431 aaPredicted RBP37.5■■■■□ 3.59
LRFN4-202ENST00000393952 PLEKHD1A6NEE1 506 aa37.48■■■■□ 3.59
LRFN4-202ENST00000393952 SUPT6HQ7KZ85 1726 aaKnown RBP37.47■■■■□ 3.59
LRFN4-202ENST00000393952 NCOA2Q15596 1464 aa37.42■■■■□ 3.58
LRFN4-202ENST00000393952 NPM1P06748 294 aaKnown RBP eCLIP37.4■■■■□ 3.58
LRFN4-202ENST00000393952 KIF14Q15058 1648 aa37.38■■■■□ 3.57
LRFN4-202ENST00000393952 PHLDB1Q86UU1 1377 aa37.36■■■■□ 3.57
LRFN4-202ENST00000393952 DNAJC5Q9H3Z4 198 aa37.36■■■■□ 3.57
LRFN4-202ENST00000393952 TRIM26Q12899 539 aaPredicted RBP37.3■■■■□ 3.56
LRFN4-202ENST00000393952 ASXL2Q76L83 1435 aa37.3■■■■□ 3.56
LRFN4-202ENST00000393952 WDR7Q9Y4E6 1490 aa37.29■■■■□ 3.56
LRFN4-202ENST00000393952 KCNH8Q96L42 1107 aa37.24■■■■□ 3.55
LRFN4-202ENST00000393952 ABCC10Q5T3U5 1492 aa37.22■■■■□ 3.55
LRFN4-202ENST00000393952 MYOM3Q5VTT5 1437 aa37.21■■■■□ 3.55
LRFN4-202ENST00000393952 MAPKBP1O60336 1514 aa37.19■■■■□ 3.54
LRFN4-202ENST00000393952 CCNB3Q8WWL7 1395 aa37.19■■■■□ 3.54
LRFN4-202ENST00000393952 RRBP1Q9P2E9 1410 aaKnown RBP37.18■■■■□ 3.54
LRFN4-202ENST00000393952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.16■■■■□ 3.54
LRFN4-202ENST00000393952 TTC37Q6PGP7 1564 aa37.16■■■■□ 3.54
LRFN4-202ENST00000393952 FGD6Q6ZV73 1430 aa37.14■■■■□ 3.54
LRFN4-202ENST00000393952 CDC42BPAQ5VT25 1732 aa37.12■■■■□ 3.53
LRFN4-202ENST00000393952 GPATCH8Q9UKJ3 1502 aaKnown RBP37.11■■■■□ 3.53
LRFN4-202ENST00000393952 ITSN2Q9NZM3 1697 aa37.11■■■■□ 3.53
LRFN4-202ENST00000393952 PCGF6Q9BYE7 350 aa37.1■■■■□ 3.53
LRFN4-202ENST00000393952 MIA2Q96PC5 1412 aa37.04■■■■□ 3.52
LRFN4-202ENST00000393952 ABCA9Q8IUA7 1624 aa37.03■■■■□ 3.52
LRFN4-202ENST00000393952 PTPN23Q9H3S7 1636 aa37.03■■■■□ 3.52
LRFN4-202ENST00000393952 MYO5CQ9NQX4 1742 aa37.03■■■■□ 3.52
LRFN4-202ENST00000393952 PREX2Q70Z35 1606 aa37.02■■■■□ 3.52
LRFN4-202ENST00000393952 CDC42BPBQ9Y5S2 1711 aa36.99■■■■□ 3.51
LRFN4-202ENST00000393952 FAM50AQ14320 339 aaKnown RBP36.99■■■■□ 3.51
LRFN4-202ENST00000393952 CFDP1Q9UEE9 299 aaPredicted RBP36.99■■■■□ 3.51
LRFN4-202ENST00000393952 TCOF1Q13428 1488 aaKnown RBP36.96■■■■□ 3.51
LRFN4-202ENST00000393952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms