RNA–Protein interactions for RNA: ENST00000393609.7

ARAP1-204, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARAP1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-204ENST00000393609 CLSPNQ9HAW4 1339 aa18.65■□□□□ 0.58
ARAP1-204ENST00000393609 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
ARAP1-204ENST00000393609 CFDP1Q9UEE9 299 aaPredicted RBP18.64■□□□□ 0.57
ARAP1-204ENST00000393609 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
ARAP1-204ENST00000393609 CARMIL2Q6F5E8 1435 aa18.6■□□□□ 0.57
ARAP1-204ENST00000393609 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
ARAP1-204ENST00000393609 RRP7BPQ9NSQ0 103 aa18.56■□□□□ 0.56
ARAP1-204ENST00000393609 NEFMP07197 916 aa18.52■□□□□ 0.56
ARAP1-204ENST00000393609 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
ARAP1-204ENST00000393609 ARID4BQ4LE39 1312 aaPredicted RBP18.47■□□□□ 0.55
ARAP1-204ENST00000393609 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.54
ARAP1-204ENST00000393609 DAXXQ9UER7 740 aaPredicted RBP18.44■□□□□ 0.54
ARAP1-204ENST00000393609 FMN1Q68DA7 1419 aa18.42■□□□□ 0.54
ARAP1-204ENST00000393609 KDM2AQ9Y2K7 1162 aa18.41■□□□□ 0.54
ARAP1-204ENST00000393609 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.54
ARAP1-204ENST00000393609 VPS8Q8N3P4 1428 aa18.39■□□□□ 0.53
ARAP1-204ENST00000393609 PPP1R15AO75807 674 aaPredicted RBP18.39■□□□□ 0.53
ARAP1-204ENST00000393609 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
ARAP1-204ENST00000393609 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
ARAP1-204ENST00000393609 SLC24A1O60721 1099 aa18.35■□□□□ 0.53
ARAP1-204ENST00000393609 CC2D2AQ9P2K1 1620 aa18.33■□□□□ 0.52
ARAP1-204ENST00000393609 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
ARAP1-204ENST00000393609 FGD5Q6ZNL6 1462 aa18.31■□□□□ 0.52
ARAP1-204ENST00000393609 JPH4Q96JJ6 628 aa18.3■□□□□ 0.52
ARAP1-204ENST00000393609 HMGXB3Q12766 1538 aa18.29■□□□□ 0.52
ARAP1-204ENST00000393609 KANK1Q14678 1352 aa18.27■□□□□ 0.51
ARAP1-204ENST00000393609 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
ARAP1-204ENST00000393609 CANXP27824 592 aaKnown RBP18.26■□□□□ 0.51
ARAP1-204ENST00000393609 RGL3Q3MIN7 710 aa18.25■□□□□ 0.51
ARAP1-204ENST00000393609 FHOD3Q2V2M9 1422 aa18.23■□□□□ 0.51
ARAP1-204ENST00000393609 EIF4G2P78344 907 aaKnown RBP eCLIP18.23■□□□□ 0.512e-7■■■■■ 33.9
ARAP1-204ENST00000393609 EFCAB2Q5VUJ9 269 aa18.23■□□□□ 0.51
ARAP1-204ENST00000393609 ZBTB47Q9UFB7 747 aaPredicted RBP18.23■□□□□ 0.51
ARAP1-204ENST00000393609 CFTRP13569 1480 aa18.22■□□□□ 0.51
ARAP1-204ENST00000393609 DDX10Q13206 875 aaKnown RBP18.22■□□□□ 0.51
ARAP1-204ENST00000393609 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
ARAP1-204ENST00000393609 RAD54L2Q9Y4B4 1467 aa18.21■□□□□ 0.51
ARAP1-204ENST00000393609 C14orf37Q86TY3 774 aa18.17■□□□□ 0.5
ARAP1-204ENST00000393609 MRC2Q9UBG0 1479 aa18.16■□□□□ 0.5
ARAP1-204ENST00000393609 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
ARAP1-204ENST00000393609 CCDC18Q5T9S5 1454 aa18.15■□□□□ 0.5
ARAP1-204ENST00000393609 BICRAQ9NZM4 1560 aa18.15■□□□□ 0.5
ARAP1-204ENST00000393609 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
ARAP1-204ENST00000393609 PTPRGP23470 1445 aa18.15■□□□□ 0.5
ARAP1-204ENST00000393609 IGF1RP08069 1367 aa18.14■□□□□ 0.49
ARAP1-204ENST00000393609 RUSC2Q8N2Y8 1516 aa18.14■□□□□ 0.49
ARAP1-204ENST00000393609 CDCA8Q53HL2 280 aa18.13■□□□□ 0.49
ARAP1-204ENST00000393609 MLECQ14165 292 aa18.11■□□□□ 0.49
ARAP1-204ENST00000393609 NESP48681 1621 aa18.11■□□□□ 0.49
ARAP1-204ENST00000393609 TMC1Q8TDI8 760 aa18.11■□□□□ 0.49
ARAP1-204ENST00000393609 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.495e-7■■■■■ 32.8
ARAP1-204ENST00000393609 HDGFP51858 240 aaKnown RBP18.09■□□□□ 0.49
ARAP1-204ENST00000393609 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
ARAP1-204ENST00000393609 CARD11Q9BXL7 1154 aa18.09■□□□□ 0.49
ARAP1-204ENST00000393609 ANKRD30AQ9BXX3 1397 aa18.09■□□□□ 0.49
ARAP1-204ENST00000393609 SETD5Q9C0A6 1442 aa18.09■□□□□ 0.49
ARAP1-204ENST00000393609 GRIN2BQ13224 1484 aa18.08■□□□□ 0.48
ARAP1-204ENST00000393609 RSPH4AQ5TD94 716 aa18.07■□□□□ 0.48
ARAP1-204ENST00000393609 GGT6Q6P531 493 aa18.07■□□□□ 0.48
ARAP1-204ENST00000393609 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
ARAP1-204ENST00000393609 FAM9BQ8IZU0 186 aa18.06■□□□□ 0.48
ARAP1-204ENST00000393609 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
ARAP1-204ENST00000393609 POGKQ9P215 609 aa18.02■□□□□ 0.48
ARAP1-204ENST00000393609 HNRNPUQ00839 825 aaKnown RBP eCLIP18.02■□□□□ 0.48
ARAP1-204ENST00000393609 CYB5RLQ6IPT4 315 aa18.01■□□□□ 0.47
ARAP1-204ENST00000393609 SIN3AQ96ST3 1273 aa18.01■□□□□ 0.47
ARAP1-204ENST00000393609 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
ARAP1-204ENST00000393609 SPAG9O60271 1321 aaKnown RBP18■□□□□ 0.47
ARAP1-204ENST00000393609 TOPBP1Q92547 1522 aa17.99■□□□□ 0.47
ARAP1-204ENST00000393609 HNRNPMP52272 730 aaKnown RBP eCLIP17.98■□□□□ 0.471e-9■■■■■ 40.2
ARAP1-204ENST00000393609 PKD2Q13563 968 aa17.98■□□□□ 0.47
ARAP1-204ENST00000393609 TIMELESSQ9UNS1 1208 aa17.97■□□□□ 0.47
ARAP1-204ENST00000393609 FKBP8Q14318 412 aa17.97■□□□□ 0.47
ARAP1-204ENST00000393609 DCAF11Q8TEB1 546 aa17.96■□□□□ 0.47
ARAP1-204ENST00000393609 NUP155O75694 1391 aa17.96■□□□□ 0.47
ARAP1-204ENST00000393609 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
ARAP1-204ENST00000393609 ANP32AP39687 249 aaKnown RBP17.95■□□□□ 0.46
ARAP1-204ENST00000393609 KNSTRNQ9Y448 316 aa17.95■□□□□ 0.46
ARAP1-204ENST00000393609 LAMC3Q9Y6N6 1575 aa17.94■□□□□ 0.46
ARAP1-204ENST00000393609 KIF3BO15066 747 aa17.94■□□□□ 0.46
ARAP1-204ENST00000393609 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
ARAP1-204ENST00000393609 DNMBPQ6XZF7 1577 aa17.93■□□□□ 0.46
ARAP1-204ENST00000393609 HAP1P54257 671 aaPredicted RBP17.92■□□□□ 0.46
ARAP1-204ENST00000393609 MIER1Q8N108 512 aa17.92■□□□□ 0.46
ARAP1-204ENST00000393609 CFAP53Q96M91 514 aa17.92■□□□□ 0.46
ARAP1-204ENST00000393609 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
ARAP1-204ENST00000393609 POLA1P09884 1462 aaPredicted RBP17.91■□□□□ 0.46
ARAP1-204ENST00000393609 BCL11AQ9H165 835 aa17.91■□□□□ 0.46
ARAP1-204ENST00000393609 TOP2BQ02880 1626 aa17.91■□□□□ 0.46
ARAP1-204ENST00000393609 RAB3GAP2Q9H2M9 1393 aa17.89■□□□□ 0.46
ARAP1-204ENST00000393609 CUX1P39880 1505 aa17.89■□□□□ 0.46
ARAP1-204ENST00000393609 PLEKHG5O94827 1062 aa17.89■□□□□ 0.45
ARAP1-204ENST00000393609 MPHOSPH9Q99550 1183 aa17.89■□□□□ 0.45
ARAP1-204ENST00000393609 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
ARAP1-204ENST00000393609 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.86■□□□□ 0.45
ARAP1-204ENST00000393609 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
ARAP1-204ENST00000393609 TMF1P82094 1093 aa17.86■□□□□ 0.45
ARAP1-204ENST00000393609 WASHC2CQ9Y4E1 1318 aa17.85■□□□□ 0.45
ARAP1-204ENST00000393609 KIF21BO75037 1637 aa17.84■□□□□ 0.45
ARAP1-204ENST00000393609 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms